Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G1217 Ceratophyllum demersum HOM05D007009 ORTHO05D008451 1.7e-79 299.3 153 100.0
Actinidia08196 Actinidia chinensis HOM05D007009 ORTHO05D008451 1.0e-31 140.6 149 52.3
Aqoxy3G03177 Aquilegia oxysepala HOM05D007009 ORTHO05D008451 5.6e-30 134.8 149 53.0
TAR374G0768 Trochodendron aralioides HOM05D007009 ORTHO05D008451 9.5e-30 134.0 149 55.0
Atru.chr11.1917 Acer truncatum HOM05D007009 ORTHO05D008451 1.2e-29 133.7 149 51.7
Cfa009076 Carpinus fangiana HOM05D007009 ORTHO05D008451 4.7e-29 131.7 149 52.3
GSVIVG01020129001 Vitis vinifera HOM05D007009 ORTHO05D008451 6.2e-29 131.3 149 52.3
CANSAT01G1662 Cannabis sativa HOM05D007009 ORTHO05D008451 8.0e-29 131.0 150 50.7
Cc11_g13910 Coffea canephora HOM05D007009 ORTHO05D008451 8.0e-29 131.0 150 51.3
Dinv31143 Davidia involucrata HOM05D007009 ORTHO05D008451 1.4e-28 130.2 147 53.1
Dinv24931 Davidia involucrata HOM05D000094 ORTHO05D002904 1.2e-27 127.1 147 54.4
CSS0013437 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 1.5e-27 126.7 149 48.3
Nn4g22971 Nelumbo nucifera HOM05D007009 ORTHO05D008451 3.4e-27 125.6 149 49.7
QL03p067658 Quercus lobata HOM05D007009 ORTHO05D008451 9.8e-27 124.0 150 50.0
Prupe.1G262900 Prunus persica HOM05D007009 ORTHO05D008451 2.2e-26 122.9 147 49.7
Thecc.02G237500 Theobroma cacao HOM05D007009 ORTHO05D008451 2.2e-26 122.9 147 49.0
CsaV3_5G032050 Cucumis sativus L. HOM05D007009 ORTHO05D008451 3.7e-26 122.1 149 50.3
CiPaw.05G143700 Carya illinoinensis HOM05D007009 ORTHO05D008451 4.9e-26 121.7 149 49.0
Ciclev10032750m.g Citrus clementina HOM05D007009 ORTHO05D008451 8.3e-26 120.9 147 51.7
Nitab4.5_0001030g0090 Nicotiana tabacum HOM05D007009 ORTHO05D008451 2.4e-25 119.4 149 47.0
Cpa.g.sc5.312 Carica papaya HOM05D007009 ORTHO05D008451 4.1e-25 118.6 149 49.7
TWI18G0515 Tripterygium wilfordii HOM05D007009 ORTHO05D008451 4.1e-25 118.6 147 48.3
FvH4_4g35380 Fragaria vesca HOM05D007009 ORTHO05D008451 5.4e-25 118.2 148 46.6
FAN07G0981 Fragaria x ananassa HOM05D007009 ORTHO05D008451 5.4e-25 118.2 148 46.6
FAN12G0678 Fragaria x ananassa HOM05D007009 ORTHO05D008451 5.4e-25 118.2 148 46.6
Medtr5g037120 Medicago truncatula HOM05D007009 ORTHO05D008451 7.0e-25 117.9 148 46.6
PSO591G0441 Papaver somniferum HOM05D007009 ORTHO05D008451 7.0e-25 117.9 147 44.9
Lj2g0006218 Lotus japonicus HOM05D007009 ORTHO05D008451 9.2e-25 117.5 151 45.0
Gohir.A05G320100 Gossypium hirsutum HOM05D007009 ORTHO05D008451 1.2e-24 117.1 147 46.9
PSO832G0198 Papaver somniferum HOM05D007009 ORTHO05D008451 1.2e-24 117.1 147 44.9
FAN22G1672 Fragaria x ananassa HOM05D007009 ORTHO05D008451 1.6e-24 116.7 148 46.6
Nitab4.5_0008607g0010 Nicotiana tabacum HOM05D007009 ORTHO05D008451 2.0e-24 116.3 149 46.3
RcHm_v2.0_Chr4g0444991 Rosa chinensis HOM05D007009 ORTHO05D008451 2.0e-24 116.3 148 46.6
vmacro01210 Vaccinium macrocarpon HOM05D007009 ORTHO05D008451 2.7e-24 115.9 159 44.7
CiPaw.06G077800 Carya illinoinensis HOM05D007009 ORTHO05D008451 4.6e-24 115.2 148 48.0
ClCG05G024860 Citrullus lanatus HOM05D007009 ORTHO05D008451 4.6e-24 115.2 149 47.7
FAN17G0686 Fragaria x ananassa HOM05D007009 ORTHO05D008451 4.6e-24 115.2 148 45.9
PGSC0003DMG401022631 Solanum tuberosum HOM05D007009 ORTHO05D008451 4.6e-24 115.2 147 46.9
CAN.G27.64 Capsicum annuum HOM05D007009 ORTHO05D008451 1.0e-23 114.0 147 46.3
Lalb_Chr05g0217381 Lupinus albus HOM05D007009 ORTHO05D008451 1.0e-23 114.0 151 45.7
arahy.Tifrunner.gnm1.ann1.8B6YVA Arachis hypogaea HOM05D007009 ORTHO05D008451 1.3e-23 113.6 151 45.0
Glyma.01G038700 Glycine max HOM05D007009 ORTHO05D008451 1.3e-23 113.6 147 46.3
COL.COLO4_36263 Corchorus olitorius HOM05D007009 ORTHO05D008451 2.3e-23 112.8 147 46.3
Gohir.D05G322400 Gossypium hirsutum HOM05D007009 ORTHO05D008451 2.3e-23 112.8 147 45.6
Gorai.009G346000 Gossypium raimondii HOM05D007009 ORTHO05D008451 2.3e-23 112.8 147 45.6
arahy.Tifrunner.gnm1.ann1.IMS4B0 Arachis hypogaea HOM05D007009 ORTHO05D008451 3.9e-23 112.1 151 44.4
Duzib251G0800 Durio zibethinus HOM05D007009 ORTHO05D008451 3.9e-23 112.1 147 48.3
Manes.01G193800 Manihot esculenta HOM05D007009 ORTHO05D008451 5.0e-23 111.7 147 46.9
Glyma.02G026000 Glycine max HOM05D007009 ORTHO05D008451 6.6e-23 111.3 147 44.9
Peaxi162Scf00828g00312 Petunia axillaris HOM05D007009 ORTHO05D008451 8.6e-23 110.9 146 46.6
TPR.G26720 Trifolium pratense HOM05D007009 ORTHO05D008451 1.5e-22 110.2 140 44.3
Solyc05g006580.3 Solanum lycopersicum HOM05D007009 ORTHO05D008451 2.5e-22 109.4 147 44.9
Sopen05g002530 Solanum pennellii HOM05D007009 ORTHO05D008451 2.5e-22 109.4 147 44.2
Hma1.2p1_0265F.1_g106360 Hydrangea macrophylla HOM05D007009 ORTHO05D008451 5.6e-22 108.2 156 44.2
SalBow2G0075 Salvia bowleyana HOM05D007009 ORTHO05D008451 7.3e-22 107.8 155 45.2
Sed0027578 Sechium edule HOM05D007009 ORTHO05D008451 3.6e-21 105.5 156 44.2
PGR102G0074 Punica granatum HOM05D007009 ORTHO05D008451 6.2e-21 104.8 148 45.3
MSTRG.7846 Avicennia marina HOM05D007009 ORTHO05D008451 8.1e-21 104.4 152 42.8
MD16G1083100 Malus domestica HOM05D007009 ORTHO05D008451 1.1e-20 104.0 145 44.8
MBI15_g31419_MAGBIO Magnolia biondii HOM05D007009 ORTHO05D008451 1.4e-20 103.6 115 52.2
Eucgr.B03385 Eucalyptus grandis HOM05D007009 ORTHO05D008451 4.0e-20 102.1 151 43.7
AUR62026539 Chenopodium quinoa HOM05D007009 ORTHO05D008451 5.2e-20 101.7 147 38.8
AUR62039445 Chenopodium quinoa HOM05D007009 ORTHO05D008451 1.5e-19 100.1 147 38.1
Rhsim12G0053000 Rhododendron simsii HOM05D007009 ORTHO05D008451 1.5e-19 100.1 145 41.4
Hund25306 Selenicereus undatus HOM05D007009 ORTHO05D008451 2.6e-19 99.4 143 42.0
THA.LOC104808792 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 5.8e-19 98.2 136 43.4
BcaB03g14779 Brassica carinata HOM05D007009 ORTHO05D008451 1.7e-18 96.7 160 41.2
Haze_12109 Corylus avellana HOM05D007009 ORTHO05D008451 1.7e-18 96.7 121 47.9
Migut.L01370 Erythranthe guttata HOM05D007009 ORTHO05D008451 2.2e-18 96.3 147 42.9
Sc11g0001470 Simmondsia chinensis HOM05D007009 ORTHO05D008451 2.2e-18 96.3 149 38.9
Zm00001eb104690 Zea mays HOM05D007009 ORTHO05D008451 6.4e-18 94.7 143 39.9
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 8.3e-18 94.4 153 38.6
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 8.3e-18 94.4 153 39.9
Ah.03g132140 Amaranthus hybridus HOM05D007009 ORTHO05D008451 1.4e-17 93.6 147 37.4
Potri.008G191700 Populus trichocarpa HOM05D007009 ORTHO05D008451 2.4e-17 92.8 156 44.2
Os09g0560400 Oryza sativa ssp. japonica HOM05D007009 ORTHO05D008451 3.2e-17 92.4 141 39.7
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 1.6e-16 90.1 154 37.0
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 1.6e-16 90.1 153 39.2
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 1.6e-16 90.1 154 39.6
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 2.1e-16 89.7 153 38.6
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 4.6e-16 88.6 153 39.2
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 6.0e-16 88.2 154 39.0
Ca_15204_v3 Cicer arietinum L. HOM05D007009 ORTHO05D008451 6.0e-16 88.2 108 46.3
Potri.010G039466 Populus trichocarpa HOM05D007009 ORTHO05D008451 1.7e-15 86.7 147 44.2
HanXRQChr08g0209091 Helianthus annuus HOM05D007009 ORTHO05D008451 8.6e-15 84.3 143 39.2
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 2.5e-14 82.8 153 38.6
MELO3C012041.2 Cucumis melo HOM05D007009 ORTHO05D008451 5.6e-14 81.6 110 47.3
Lj6A798T55 Lonicera japonica HOM05D007009 ORTHO05D008451 7.3e-14 81.3 110 45.5
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 9.5e-14 80.9 156 37.8
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 9.5e-14 80.9 153 36.6
Duzib268G1291 Durio zibethinus HOM05D007009 ORTHO05D008451 9.5e-14 80.9 108 44.4
Mapoly0049s0134 Marchantia polymorpha HOM05D007009 ORTHO05D008451 8.1e-13 77.8 149 32.9
ECA233G5592 Erigeron canadensis HOM05D007009 ORTHO05D008451 1.4e-12 77.0 131 39.7
VMungo1215G0662 Vigna mungo HOM05D007009 ORTHO05D008451 5.2e-12 75.1 107 43.0
Psat2g116400 Pisum sativum HOM05D007009 ORTHO05D008451 1.5e-11 73.6 110 42.7
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 2.0e-11 73.2 164 36.6
SGA_v2.0_scaffold166G38305 Striga asiatica HOM05D007009 ORTHO05D008451 7.6e-11 71.2 110 40.0
EL10Ac6g13085 Beta vulgaris HOM05D007009 ORTHO05D008451 1.7e-10 70.1 113 36.3
Phvul.002G078700 Phaseolus vulgaris HOM05D007009 ORTHO05D008451 1.7e-10 70.1 77 48.1
Lsat_1_v5_gn_8_161781 Lactuca sativa HOM05D007009 ORTHO05D008451 3.2e-09 65.9 142 28.9
Sabra10G0027300 Salix brachista HOM05D007009 ORTHO05D008451 2.1e-08 63.2 116 40.5
DCAR_026574 Daucus carota HOM05D007009 ORTHO05D008451 6.0e-08 61.6 118 33.1
THA.LOC104822186 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 6.0e-08 61.6 148 33.1
C03p84900 Brassica napus HOM05D000455 ORTHO05D008451 2.3e-07 59.7 49 55.1
BolC3t20782H Brassica oleracea HOM05D000455 ORTHO05D008451 2.3e-07 59.7 49 55.1
SEGI_38065 Sequoiadendron giganteum HOM05D007009 ORTHO05D008451 2.3e-07 59.7 115 33.0
unitig_8.g2944 Utricularia gibba HOM05D007009 ORTHO05D008451 3.3e-06 55.8 107 34.6


User provided reference genes

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