Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G1176 Ceratophyllum demersum HOM05D006590 ORTHO05D008427 5.9e-109 397.5 197 100.0
Potri.015G017100 Populus trichocarpa HOM05D006590 ORTHO05D008427 3.9e-20 102.4 58 81.0
Cfa016251 Carpinus fangiana HOM05D006590 ORTHO05D008427 6.7e-20 101.7 58 79.3
AUR62019378 Chenopodium quinoa HOM05D006590 ORTHO05D008427 6.7e-20 101.7 113 53.1
Haze_00189 Corylus avellana HOM05D006590 ORTHO05D008427 6.7e-20 101.7 58 79.3
QL09p009505 Quercus lobata HOM05D006590 ORTHO05D008427 6.7e-20 101.7 58 79.3
Thecc.03G196200 Theobroma cacao HOM05D006590 ORTHO05D008427 6.7e-20 101.7 58 79.3
CiPaw.05G251800 Carya illinoinensis HOM05D006590 ORTHO05D008427 8.8e-20 101.3 58 79.3
Dinv35324 Davidia involucrata HOM05D006590 ORTHO05D008427 8.8e-20 101.3 58 79.3
EL10Ac3g05300 Beta vulgaris HOM05D006590 ORTHO05D008427 1.1e-19 100.9 58 81.0
Duzib205G0486 Durio zibethinus HOM05D006590 ORTHO05D008427 1.5e-19 100.5 58 79.3
TWI14G0328 Tripterygium wilfordii HOM05D006590 ORTHO05D008427 2.0e-19 100.1 58 77.6
ECA232G3273 Erigeron canadensis HOM05D006590 ORTHO05D008427 2.6e-19 99.8 58 77.6
vmacro06540 Vaccinium macrocarpon HOM05D006590 ORTHO05D008427 2.6e-19 99.8 58 77.6
Actinidia08640 Actinidia chinensis HOM05D006590 ORTHO05D008427 3.3e-19 99.4 58 77.6
Cpa.g.sc3.70 Carica papaya HOM05D006590 ORTHO05D008427 3.3e-19 99.4 121 46.3
Rhsim03G0207800 Rhododendron simsii HOM05D006590 ORTHO05D008427 3.3e-19 99.4 58 77.6
C09p43300 Brassica napus HOM05D001108 ORTHO05D001619 4.4e-19 99.0 58 75.9
Lsat_1_v5_gn_5_75160 Lactuca sativa HOM05D006590 ORTHO05D008427 4.4e-19 99.0 63 69.8
THA.LOC104800297 Tarenaya hassleriana HOM05D006590 ORTHO05D008427 4.4e-19 99.0 58 75.9
BolC9t57211H Brassica oleracea HOM05D006590 ORTHO05D008427 5.7e-19 98.6 58 74.1
A10p10910 Brassica napus HOM05D001108 ORTHO05D001619 7.4e-19 98.2 58 75.9
BraA10t43179Z Brassica rapa HOM05D006590 ORTHO05D008427 7.4e-19 98.2 58 75.9
Thhalv10012882m.g Eutrema salsugineum HOM05D006590 ORTHO05D008427 7.4e-19 98.2 58 75.9
Potri.015G016801 Populus trichocarpa HOM05D006590 ORTHO05D008427 7.4e-19 98.2 58 81.0
Sp6g15580 Schrenkiella parvula HOM05D006590 ORTHO05D008427 7.4e-19 98.2 58 75.9
Gohir.A12G250600 Gossypium hirsutum HOM05D006590 ORTHO05D008427 9.7e-19 97.8 58 77.6
Gohir.D12G251400 Gossypium hirsutum HOM05D006590 ORTHO05D008427 9.7e-19 97.8 58 77.6
Gorai.008G269500 Gossypium raimondii HOM05D006590 ORTHO05D008427 9.7e-19 97.8 58 77.6
GSVIVG01038710001 Vitis vinifera HOM05D006590 ORTHO05D008427 9.7e-19 97.8 58 75.9
Eucgr.A01466 Eucalyptus grandis HOM05D006590 ORTHO05D008427 1.3e-18 97.4 58 75.9
Glyma.06G127700 Glycine max HOM05D006590 ORTHO05D008427 1.3e-18 97.4 58 74.1
Hma1.2p1_0404F.1_g145500 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 1.3e-18 97.4 58 74.1
Hma1.2p1_0404F.1_g145510 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 1.3e-18 97.4 58 74.1
Sed0010238 Sechium edule HOM05D006590 ORTHO05D008427 1.3e-18 97.4 57 77.2
SGA_v2.0_scaffold44G16790 Striga asiatica HOM05D006590 ORTHO05D008427 1.3e-18 97.4 58 74.1
TAR375G1022 Trochodendron aralioides HOM05D006590 ORTHO05D008427 1.3e-18 97.4 58 75.9
CSS0003993 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 1.7e-18 97.1 58 74.1
CSS0014515 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 1.7e-18 97.1 58 74.1
Lalb_Chr08g0240321 Lupinus albus HOM05D006590 ORTHO05D008427 1.7e-18 97.1 58 74.1
PSO063G2913 Papaver somniferum HOM05D006590 ORTHO05D008427 1.7e-18 97.1 62 71.0
PSO170G2823 Papaver somniferum HOM05D006590 ORTHO05D008427 1.7e-18 97.1 62 71.0
PGR042G1173 Punica granatum HOM05D006590 ORTHO05D008427 1.7e-18 97.1 58 75.9
Ciclev10004491m.g Citrus clementina HOM05D006590 ORTHO05D008427 2.2e-18 96.7 58 75.9
Lj1g0007393 Lotus japonicus HOM05D006590 ORTHO05D008427 2.2e-18 96.7 58 72.4
Ca_16698_v3 Cicer arietinum L. HOM05D006590 ORTHO05D008427 2.8e-18 96.3 58 72.4
HanXRQChr09g0250931 Helianthus annuus HOM05D006590 ORTHO05D008427 2.8e-18 96.3 58 74.1
Manes.06G159700 Manihot esculenta HOM05D006590 ORTHO05D008427 2.8e-18 96.3 58 75.9
Cc02_g01670 Coffea canephora HOM05D006590 ORTHO05D008427 3.7e-18 95.9 57 73.7
MBI07_g07100_MAGBIO Magnolia biondii HOM05D006590 ORTHO05D008427 3.7e-18 95.9 58 74.1
AUR62006110 Chenopodium quinoa HOM05D006590 ORTHO05D008427 4.8e-18 95.5 58 74.1
Nitab4.5_0007081g0010 Nicotiana tabacum HOM05D006590 ORTHO05D008427 4.8e-18 95.5 58 72.4
Phvul.009G053500 Phaseolus vulgaris HOM05D006590 ORTHO05D008427 4.8e-18 95.5 58 74.1
TPR.G17286 Trifolium pratense HOM05D006590 ORTHO05D008427 4.8e-18 95.5 58 72.4
VMungo1309G0677 Vigna mungo HOM05D006590 ORTHO05D008427 4.8e-18 95.5 58 74.1
arahy.Tifrunner.gnm1.ann1.ICGL65 Arachis hypogaea HOM05D006590 ORTHO05D008427 6.3e-18 95.1 57 73.7
arahy.Tifrunner.gnm1.ann1.X012TI Arachis hypogaea HOM05D006590 ORTHO05D008427 6.3e-18 95.1 57 73.7
CANSAT21G0035 Cannabis sativa HOM05D006590 ORTHO05D008427 6.3e-18 95.1 58 72.4
Glyma.04G236600 Glycine max HOM05D006590 ORTHO05D008427 6.3e-18 95.1 58 72.4
Prupe.2G311400 Prunus persica HOM05D006590 ORTHO05D008427 6.3e-18 95.1 58 72.4
FvH4_7g31750 Fragaria vesca HOM05D006590 ORTHO05D008427 8.2e-18 94.7 58 72.4
FAN06G3161 Fragaria x ananassa HOM05D006590 ORTHO05D008427 8.2e-18 94.7 58 72.4
FAN06G3878 Fragaria x ananassa HOM05D006590 ORTHO05D008427 8.2e-18 94.7 58 72.4
MD01G1219800 Malus domestica HOM05D006590 ORTHO05D008427 8.2e-18 94.7 58 70.7
Sc13g0009780 Simmondsia chinensis HOM05D006590 ORTHO05D008427 8.2e-18 94.7 65 69.2
AL8G28150 Arabidopsis lyrata HOM05D006590 ORTHO05D008427 1.1e-17 94.4 58 72.4
AT5G53450 Arabidopsis thaliana HOM05D006590 ORTHO05D008427 1.1e-17 94.4 58 72.4
CAN.G108.67 Capsicum annuum HOM05D006590 ORTHO05D008427 1.1e-17 94.4 58 74.1
CARHR266570 Cardamine hirsuta HOM05D006590 ORTHO05D008427 1.1e-17 94.4 58 72.4
Medtr3g091290 Medicago truncatula HOM05D006590 ORTHO05D008427 1.1e-17 94.4 58 70.7
Solyc03g083420.4 Solanum lycopersicum HOM05D006590 ORTHO05D008427 1.1e-17 94.4 58 74.1
Sopen03g023190 Solanum pennellii HOM05D006590 ORTHO05D008427 1.1e-17 94.4 58 74.1
PGSC0003DMG400009120 Solanum tuberosum HOM05D006590 ORTHO05D008427 1.1e-17 94.4 58 74.1
Aa31LG3G9610 Aethionema arabicum HOM05D006590 ORTHO05D008427 1.4e-17 94.0 58 72.4
Migut.F00225 Erythranthe guttata HOM05D006590 ORTHO05D008427 1.4e-17 94.0 58 70.7
Os01g0655500 Oryza sativa ssp. japonica HOM05D006590 ORTHO05D008427 1.4e-17 94.0 58 70.7
Atru.chr1.163 Acer truncatum HOM05D006590 ORTHO05D008427 1.8e-17 93.6 58 74.1
MELO3C008489.2 Cucumis melo HOM05D006590 ORTHO05D008427 1.8e-17 93.6 57 73.7
Peaxi162Scf00550g00546 Petunia axillaris HOM05D006590 ORTHO05D008427 1.8e-17 93.6 58 72.4
RcHm_v2.0_Chr1g0380971 Rosa chinensis HOM05D006590 ORTHO05D008427 1.8e-17 93.6 58 70.7
Carub.0008s1361 Capsella rubella HOM05D006590 ORTHO05D008427 2.4e-17 93.2 58 70.7
FAN01G1498 Fragaria x ananassa HOM05D006590 ORTHO05D008427 2.4e-17 93.2 58 70.7
FAN10G1373 Fragaria x ananassa HOM05D006590 ORTHO05D008427 2.4e-17 93.2 58 70.7
CsaV3_3G027870 Cucumis sativus L. HOM05D006590 ORTHO05D008427 3.1e-17 92.8 57 73.7
DCAR_014541 Daucus carota HOM05D006590 ORTHO05D008427 3.1e-17 92.8 58 70.7
Nitab4.5_0000714g0140 Nicotiana tabacum HOM05D006590 ORTHO05D008427 3.1e-17 92.8 58 70.7
Psat5g078080 Pisum sativum HOM05D006590 ORTHO05D008427 3.1e-17 92.8 58 69.0
FAN10G2802 Fragaria x ananassa HOM05D006590 ORTHO05D008427 5.3e-17 92.0 58 69.0
Nn1g01869 Nelumbo nucifera HOM05D006590 ORTHO05D008427 7.0e-17 91.7 58 70.7
unitig_899.g15485 Utricularia gibba HOM05D006590 ORTHO05D008427 9.1e-17 91.3 58 69.0
SalBow4G1387 Salvia bowleyana HOM05D006590 ORTHO05D008427 1.5e-16 90.5 58 67.2
SalBow4G1653 Salvia bowleyana HOM05D006590 ORTHO05D008427 1.5e-16 90.5 58 67.2
FAN03G2401 Fragaria x ananassa HOM05D006590 ORTHO05D008427 2.0e-16 90.1 58 69.0
HPP92_006416 Vanilla planifolia HOM05D006590 ORTHO05D008427 2.0e-16 90.1 58 63.8
Oeu041046.1 Olea europaea HOM05D006590 ORTHO05D008427 2.6e-16 89.7 58 69.0
Aqoxy5G04233 Aquilegia oxysepala HOM05D006590 ORTHO05D008427 3.5e-16 89.4 58 67.2
Mapoly0022s0163 Marchantia polymorpha HOM05D006590 ORTHO05D008427 5.9e-16 88.6 90 47.8
SEGI_37244 Sequoiadendron giganteum HOM05D006590 ORTHO05D008427 1.0e-15 87.8 58 69.0
ATR0602G100 Amborella trichopoda HOM05D006590 ORTHO05D008427 1.3e-15 87.4 58 65.5
COL.COLO4_11262 Corchorus olitorius HOM05D006590 ORTHO05D008427 3.8e-15 85.9 83 54.2
ClCG05G008870 Citrullus lanatus HOM05D006590 ORTHO05D008427 5.0e-15 85.5 43 83.7
Lj1C1015G5 Lonicera japonica HOM05D006590 ORTHO05D008427 2.5e-14 83.2 43 81.4
Potri.015G016300 Populus trichocarpa HOM05D006590 ORTHO05D008427 9.4e-14 81.3 43 83.7
Actinidia34212 Actinidia chinensis HOM05D006590 ORTHO05D008427 1.6e-13 80.5 39 89.7
SMO172G0068 Selaginella moellendorffii HOM05D006590 ORTHO05D008427 1.6e-13 80.5 70 55.7
Zm00001eb158040 Zea mays HOM05D006590 ORTHO05D008427 1.4e-12 77.4 43 72.1
CBR_g39728 Chara braunii HOM05D006590 ORTHO05D008427 1.7e-10 70.5 60 48.3
BcaB08g35710 Brassica carinata HOM05D006590 ORTHO05D008427 3.1e-09 66.2 44 72.7
Aqoxy2G01300 Aquilegia oxysepala HOM05D006590 ORTHO05D008427 4.1e-09 65.9 43 65.1


User provided reference genes

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