Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 4.2e-111 404.8 225 100.0
CDE08G1589 Ceratophyllum demersum HOM05D001163 ORTHO05D001769 6.9e-45 184.9 118 83.1
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 1.0e-16 91.3 126 45.2
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 3.9e-16 89.4 91 62.6
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 1.8e-13 80.5 115 47.0
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 1.8e-13 80.5 119 51.3
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 2.4e-13 80.1 110 42.7
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 4.1e-13 79.3 125 41.6
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 5.3e-13 79.0 116 43.1
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 1.2e-12 77.8 112 44.6
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.6e-12 76.6 87 50.6
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 2.6e-12 76.6 132 47.0
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 2.6e-12 76.6 111 44.1
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 5.9e-12 75.5 118 46.6
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 7.7e-12 75.1 78 55.1
CDE09G0987 Ceratophyllum demersum HOM05D000257 ORTHO05D008920 7.7e-12 75.1 118 42.4
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 7.7e-12 75.1 114 43.0
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 7.7e-12 75.1 121 39.7
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 7.7e-12 75.1 110 41.8
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.0e-11 74.7 81 53.1
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 1.0e-11 74.7 115 41.7
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 1.0e-11 74.7 129 39.5
CDE02G4336 Ceratophyllum demersum HOM05D000257 ORTHO05D008920 1.3e-11 74.3 118 42.4
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 1.3e-11 74.3 125 40.8
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 5.0e-11 72.4 117 38.5
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 2.5e-10 70.1 115 46.1
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 2.5e-10 70.1 121 37.2
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 2.5e-10 70.1 112 44.6
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 3.2e-10 69.7 110 40.0
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 3.2e-10 69.7 89 51.7
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 5.5e-10 68.9 94 45.7
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 5.5e-10 68.9 129 41.9
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 9.4e-10 68.2 85 45.9
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.2e-09 67.8 115 45.2
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.2e-09 67.8 90 48.9
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.2e-09 67.8 140 35.0
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 1.6e-09 67.4 91 47.3
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 1.6e-09 67.4 123 41.5
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 1.6e-09 67.4 122 39.3
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 1.6e-09 67.4 106 39.6
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 1.6e-09 67.4 122 36.1
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 2.1e-09 67.0 96 43.8
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 2.1e-09 67.0 119 42.9
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 2.1e-09 67.0 82 52.4
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 3.6e-09 66.2 84 48.8
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 6.1e-09 65.5 126 36.5
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 6.1e-09 65.5 113 39.8
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 6.1e-09 65.5 113 42.5
Nn2g13886 Nelumbo nucifera HOM05D000157 ORTHO05D000311 1.0e-08 64.7 111 35.1
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 1.4e-08 64.3 112 42.9
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 1.8e-08 63.9 122 35.2
Hma1.2p1_0051F.1_g029610 Hydrangea macrophylla HOM05D000157 ORTHO05D000311 2.3e-08 63.5 120 36.7
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 2.3e-08 63.5 130 36.2
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 2.3e-08 63.5 117 44.4
TAR623G1102 Trochodendron aralioides HOM05D000086 ORTHO05D000311 2.3e-08 63.5 90 40.0
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 4.0e-08 62.8 136 42.6
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 5.2e-08 62.4 119 39.5
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 6.7e-08 62.0 123 37.4
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 1.1e-07 61.2 82 50.0
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 1.1e-07 61.2 88 46.6
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 2.0e-07 60.5 120 43.3
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 3.3e-07 59.7 89 41.6
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 4.4e-07 59.3 115 40.9
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 4.4e-07 59.3 150 32.7
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 4.4e-07 59.3 147 34.7
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 5.7e-07 58.9 96 44.8
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 5.7e-07 58.9 81 48.1
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 7.5e-07 58.5 120 43.3
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 7.5e-07 58.5 118 44.1
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 9.7e-07 58.2 117 41.9
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 1.3e-06 57.8 121 43.0
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 1.3e-06 57.8 68 48.5
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 1.7e-06 57.4 120 42.5
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.7e-06 57.4 150 32.0
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 2.2e-06 57.0 119 38.7
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 2.8e-06 56.6 131 34.4
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 3.7e-06 56.2 120 37.5
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 6.3e-06 55.5 122 38.5
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 6.3e-06 55.5 81 48.1
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 8.2e-06 55.1 110 40.9
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 8.2e-06 55.1 121 44.6


User provided reference genes

Program Settings