Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G1046 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 2.6e-192 675.2 346 100.0
Dinv15443 Davidia involucrata HOM05D006699 ORTHO05D008399 7.7e-128 461.1 347 67.1
Thecc.01G150500 Theobroma cacao HOM05D006699 ORTHO05D008399 6.5e-127 458.0 321 72.0
TAR626G0153 Trochodendron aralioides HOM05D006699 ORTHO05D008399 8.5e-127 457.6 354 67.8
QL08p041677 Quercus lobata HOM05D006699 ORTHO05D008399 1.6e-125 453.4 336 67.3
QL08p041638 Quercus lobata HOM05D006699 ORTHO05D008399 2.1e-125 453.0 336 67.3
Cfa023335 Carpinus fangiana HOM05D006699 ORTHO05D008399 4.7e-125 451.8 337 68.8
GSVIVG01020707001 Vitis vinifera HOM05D006699 ORTHO05D008399 1.0e-124 450.7 343 66.2
CSS0012388 Camellia sinensis var. sinensis HOM05D006699 ORTHO05D008399 1.1e-123 447.2 344 66.3
Ciclev10015418m.g Citrus clementina HOM05D006699 ORTHO05D008399 9.7e-123 444.1 324 67.6
Haze_13371 Corylus avellana HOM05D006699 ORTHO05D008399 1.7e-122 443.4 337 67.7
COL.COLO4_33580 Corchorus olitorius HOM05D006699 ORTHO05D008399 8.2e-122 441.0 346 65.0
BraA04t17899Z Brassica rapa HOM05D006699 ORTHO05D008399 3.1e-121 439.1 334 66.2
A04p23730 Brassica napus HOM05D006699 ORTHO05D008399 4.1e-121 438.7 334 65.9
ClCG02G017820 Citrullus lanatus HOM05D006699 ORTHO05D008399 4.1e-121 438.7 342 67.0
PGR042G0843 Punica granatum HOM05D006699 ORTHO05D008399 5.3e-121 438.3 344 64.8
MD09G1238000 Malus domestica HOM05D006699 ORTHO05D008399 6.9e-121 438.0 339 63.1
CiPaw.04G132200 Carya illinoinensis HOM05D006699 ORTHO05D008399 9.1e-121 437.6 328 65.9
Gohir.A12G086400 Gossypium hirsutum HOM05D006699 ORTHO05D008399 9.1e-121 437.6 316 70.6
Eucgr.A01914 Eucalyptus grandis HOM05D006699 ORTHO05D008399 1.2e-120 437.2 330 65.5
Potri.014G142200 Populus trichocarpa HOM05D006699 ORTHO05D008399 1.5e-120 436.8 308 68.8
MD17G1230900 Malus domestica HOM05D006699 ORTHO05D008399 2.0e-120 436.4 339 62.5
C04p60180 Brassica napus HOM05D006699 ORTHO05D008399 1.7e-119 433.3 334 65.3
BolC4t27520H Brassica oleracea HOM05D006699 ORTHO05D008399 1.7e-119 433.3 334 65.3
Gohir.D12G085000 Gossypium hirsutum HOM05D006699 ORTHO05D008399 1.7e-119 433.3 316 69.6
Gorai.008G095400 Gossypium raimondii HOM05D006699 ORTHO05D008399 1.7e-119 433.3 315 69.5
Prupe.3G118500 Prunus persica HOM05D006699 ORTHO05D008399 2.2e-119 433.0 337 62.0
TWI59G0496 Tripterygium wilfordii HOM05D006699 ORTHO05D008399 8.5e-119 431.0 319 68.0
CANSAT64G2599 Cannabis sativa HOM05D006699 ORTHO05D008399 1.4e-118 430.3 335 63.9
CsaV3_6G018450 Cucumis sativus L. HOM05D006699 ORTHO05D008399 2.5e-118 429.5 324 67.9
Sp4g13510 Schrenkiella parvula HOM05D006699 ORTHO05D008399 5.5e-118 428.3 332 63.6
HanXRQChr17g0557951 Helianthus annuus HOM05D006699 ORTHO05D008399 9.4e-118 427.6 339 65.2
CARHR124570 Cardamine hirsuta HOM05D006699 ORTHO05D008399 1.2e-117 427.2 336 64.3
AL4G26070 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 1.0e-116 424.1 335 65.1
AL4G26150 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 2.3e-116 422.9 335 64.8
Carub.0004s1225 Capsella rubella HOM05D006699 ORTHO05D008399 2.3e-116 422.9 334 64.4
Lj1A681T38 Lonicera japonica HOM05D006699 ORTHO05D008399 3.0e-116 422.5 351 61.3
MSTRG.15092 Avicennia marina HOM05D006699 ORTHO05D008399 6.7e-116 421.4 331 63.7
RcHm_v2.0_Chr2g0129651 Rosa chinensis HOM05D006699 ORTHO05D008399 6.7e-116 421.4 336 63.1
ECA233G1148 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.8e-116 421.0 347 63.7
AT2G31040 Arabidopsis thaliana HOM05D006699 ORTHO05D008399 1.5e-115 420.2 335 64.8
Thhalv10016897m.g Eutrema salsugineum HOM05D006699 ORTHO05D008399 3.3e-115 419.1 332 62.3
arahy.Tifrunner.gnm1.ann1.GAG0UF Arachis hypogaea HOM05D006699 ORTHO05D008399 4.4e-115 418.7 340 63.8
Rhsim06G0131200 Rhododendron simsii HOM05D006699 ORTHO05D008399 7.4e-115 417.9 306 68.3
FvH4_6g27380 Fragaria vesca HOM05D006699 ORTHO05D008399 9.7e-115 417.5 339 61.7
arahy.Tifrunner.gnm1.ann1.0K2T49 Arachis hypogaea HOM05D006699 ORTHO05D008399 1.3e-114 417.2 340 63.5
AUR62039018 Chenopodium quinoa HOM05D006699 ORTHO05D008399 2.8e-114 416.0 317 67.2
Lsat_1_v5_gn_8_140640 Lactuca sativa HOM05D006699 ORTHO05D008399 3.7e-114 415.6 344 61.9
VMungo1127G1340 Vigna mungo HOM05D006699 ORTHO05D008399 1.8e-113 413.3 343 63.3
SGA_v2.0_scaffold9G04816 Striga asiatica HOM05D006699 ORTHO05D008399 2.4e-113 412.9 343 62.7
Peaxi162Scf00384g00423 Petunia axillaris HOM05D006699 ORTHO05D008399 3.1e-113 412.5 332 63.9
Ca_18111_v3 Cicer arietinum L. HOM05D006699 ORTHO05D008399 9.1e-113 411.0 332 63.0
Sabra14G0107300 Salix brachista HOM05D006699 ORTHO05D008399 9.1e-113 411.0 326 65.3
unitig_0.g2026 Utricularia gibba HOM05D006699 ORTHO05D008399 1.2e-112 410.6 364 59.1
Phvul.011G130500 Phaseolus vulgaris HOM05D006699 ORTHO05D008399 1.6e-112 410.2 340 62.9
EL10Ac2g03349 Beta vulgaris HOM05D006699 ORTHO05D008399 2.6e-112 409.5 320 66.6
Glyma.06G277600 Glycine max HOM05D006699 ORTHO05D008399 2.6e-112 409.5 343 62.7
ATR0602G053 Amborella trichopoda HOM05D006699 ORTHO05D008399 3.5e-112 409.1 324 68.2
PSO229G0039 Papaver somniferum HOM05D006699 ORTHO05D008399 1.0e-111 407.5 314 64.3
PGSC0003DMG400007857 Solanum tuberosum HOM05D006699 ORTHO05D008399 2.9e-111 406.0 343 62.7
Psat7g165360 Pisum sativum HOM05D006699 ORTHO05D008399 1.5e-110 403.7 331 62.5
Lalb_Chr01g0006001 Lupinus albus HOM05D006699 ORTHO05D008399 1.9e-110 403.3 344 63.4
Actinidia11153 Actinidia chinensis HOM05D006699 ORTHO05D008399 4.2e-110 402.1 331 65.0
FAN14G2123 Fragaria x ananassa HOM05D006699 ORTHO05D008399 5.5e-110 401.7 351 59.3
Migut.M00261 Erythranthe guttata HOM05D006699 ORTHO05D008399 7.2e-110 401.4 349 58.5
CAN.G1049.6 Capsicum annuum HOM05D006699 ORTHO05D008399 9.4e-110 401.0 345 62.6
Medtr4g079850 Medicago truncatula HOM05D006699 ORTHO05D008399 1.6e-109 400.2 332 63.6
Manes.02G091200 Manihot esculenta HOM05D006699 ORTHO05D008399 2.7e-109 399.4 329 65.0
PSO675G3944 Papaver somniferum HOM05D006699 ORTHO05D008399 3.6e-109 399.1 314 62.7
Lj3g0015335 Lotus japonicus HOM05D006699 ORTHO05D008399 4.7e-109 398.7 340 60.9
Nitab4.5_0001095g0100 Nicotiana tabacum HOM05D006699 ORTHO05D008399 1.5e-107 393.7 335 63.0
Solyc12g010870.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 1.5e-107 393.7 310 66.8
Sopen12g006230 Solanum pennellii HOM05D006699 ORTHO05D008399 5.7e-107 391.7 304 67.1
FAN09G4348 Fragaria x ananassa HOM05D006699 ORTHO05D008399 3.7e-106 389.0 375 55.5
Nitab4.5_0000537g0130 Nicotiana tabacum HOM05D006699 ORTHO05D008399 9.1e-105 384.4 345 61.4
PGSC0003DMG400020443 Solanum tuberosum HOM05D006699 ORTHO05D008399 1.7e-103 380.2 350 59.7
Solyc07g055050.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 2.2e-103 379.8 350 58.9
DCAR_017060 Daucus carota HOM05D006699 ORTHO05D008399 5.0e-103 378.6 348 58.9
Sopen07g027160 Solanum pennellii HOM05D006699 ORTHO05D008399 8.5e-103 377.9 350 59.1
Os01g0673800 Oryza sativa ssp. japonica HOM05D006699 ORTHO05D008399 1.5e-102 377.1 319 62.4
Hund07812 Selenicereus undatus HOM05D006699 ORTHO05D008399 4.8e-98 362.1 354 57.6
Aqoxy1G02064 Aquilegia oxysepala HOM05D006699 ORTHO05D008399 1.1e-97 360.9 262 71.4
Nitab4.5_0011277g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 4.1e-97 359.0 347 57.9
Nitab4.5_0009754g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 1.3e-95 354.0 335 59.1
FAN02G3357 Fragaria x ananassa HOM05D006699 ORTHO05D008399 2.5e-94 349.7 303 58.7
Sc06g0009080 Simmondsia chinensis HOM05D006699 ORTHO05D008399 7.2e-94 348.2 270 64.8
Aa31LG1G7380 Aethionema arabicum HOM05D006699 ORTHO05D008399 1.0e-92 344.4 302 59.3
Sed0016519 Sechium edule HOM05D006699 ORTHO05D008399 1.2e-91 340.9 328 57.3
Manes.01G133200 Manihot esculenta HOM05D006699 ORTHO05D008399 2.6e-91 339.7 274 63.5
Sed0000889 Sechium edule HOM05D006699 ORTHO05D008399 2.8e-90 336.3 269 62.8
MELO3C013567.2 Cucumis melo HOM05D006699 ORTHO05D008399 2.3e-87 326.6 238 70.6
Lju1655A0G36 Lonicera japonica HOM05D006699 ORTHO05D008399 1.1e-86 324.3 415 46.3
Peaxi162Scf00469g00217 Petunia axillaris HOM05D006699 ORTHO05D008399 3.3e-86 322.8 318 56.3
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 2.3e-84 316.6 236 69.1
HPP92_009665 Vanilla planifolia HOM05D006699 ORTHO05D008399 2.0e-83 313.5 390 47.4
Oeu018752.1 Olea europaea HOM05D006699 ORTHO05D008399 1.4e-81 307.4 241 63.5
TPR.G28306 Trifolium pratense HOM05D006699 ORTHO05D008399 5.2e-76 288.9 262 58.8
Eucgr.K01127 Eucalyptus grandis HOM05D006699 ORTHO05D008399 1.2e-75 287.7 329 50.8
Cc05_g08340 Coffea canephora HOM05D006699 ORTHO05D008399 1.5e-75 287.3 246 59.8
vmacro12376 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 1.7e-74 283.9 340 47.6
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 9.5e-70 268.1 184 71.7
Pp3c8_13580 Physcomitrium patens HOM05D006699 ORTHO05D008399 1.2e-69 267.7 312 49.0
Mapoly0038s0046 Marchantia polymorpha HOM05D006699 ORTHO05D008399 1.4e-68 264.2 302 48.7
SEGI_23271 Sequoiadendron giganteum HOM05D006699 ORTHO05D008399 8.1e-61 238.4 254 52.4
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis HOM05D006699 ORTHO05D008399 6.8e-60 235.3 274 48.5
Atru.chr6.2796 Acer truncatum HOM05D006699 ORTHO05D008399 3.8e-58 229.6 185 60.5
Zm00001eb360100 Zea mays HOM05D006699 ORTHO05D008399 7.8e-56 221.9 248 51.6
SMO014G0045 Selaginella moellendorffii HOM05D006699 ORTHO05D008399 1.9e-54 217.2 337 41.8
Cpa.g.sc52.174 Carica papaya HOM05D006699 ORTHO05D008399 2.9e-50 203.4 168 62.5
Cc05_g08350 Coffea canephora HOM05D006699 ORTHO05D008399 4.5e-35 152.9 100 76.0
Cre01.g049600 Chlamydomonas reinhardtii HOM05D006699 ORTHO05D008399 4.9e-26 122.9 306 33.0
Atru.chr6.2795 Acer truncatum HOM05D006699 ORTHO05D008399 8.4e-26 122.1 72 80.6
BraA03t11005Z Brassica rapa HOM05D006699 ORTHO05D008399 3.0e-23 113.6 94 61.7
CDE10G0215 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 8.7e-23 112.1 60 91.7
A03p17330 Brassica napus HOM05D006699 ORTHO05D008399 3.3e-22 110.2 94 60.6
vmacro12375 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 3.1e-20 103.6 85 57.6
PRCOL_00001453 Prasinoderma coloniale HOM05D006699 ORTHO05D008399 6.9e-20 102.4 258 31.0
Ah.01g003520 Amaranthus hybridus HOM05D006699 ORTHO05D008399 3.4e-19 100.1 75 56.0
MCO04G044 Micromonas commoda HOM05D006699 ORTHO05D008399 1.3e-13 81.6 225 30.2
Lsat_1_v5_gn_2_38761 Lactuca sativa HOM05D006699 ORTHO05D008399 2.8e-13 80.5 77 49.4
C03p20440 Brassica napus HOM05D006699 ORTHO05D042655 5.9e-11 72.8 54 63.0
BolC3t14422H Brassica oleracea HOM05D006699 ORTHO05D042655 5.9e-11 72.8 54 63.0
TPR.G33085 Trifolium pratense HOM05D006699 ORTHO05D008399 1.4e-07 61.6 45 73.3
SMO338G0026 Selaginella moellendorffii HOM05D005386 ORTHO05D006981 3.0e-07 60.5 175 29.7
CSS0011344 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 9.7e-06 55.5 161 29.2
CSS0028109 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 9.7e-06 55.5 161 29.2
Mapoly0094s0013 Marchantia polymorpha HOM05D005386 ORTHO05D006981 9.7e-06 55.5 159 29.6


User provided reference genes

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