Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 0.0e+00 1944.9 1018 100.0
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 0.0e+00 1380.5 1030 71.9
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 0.0e+00 1374.4 1028 71.3
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 0.0e+00 1369.8 1029 71.0
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 0.0e+00 1352.0 1029 70.7
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 0.0e+00 1347.8 1025 70.4
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 0.0e+00 1341.3 1037 69.9
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 0.0e+00 1333.9 1028 68.9
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 0.0e+00 1328.2 1028 68.8
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 0.0e+00 1326.6 993 72.1
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 0.0e+00 1322.0 1018 69.6
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 0.0e+00 1320.8 1018 69.6
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 0.0e+00 1318.5 1018 69.6
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 0.0e+00 1318.1 1021 69.1
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 0.0e+00 1315.1 1020 69.4
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 0.0e+00 1310.4 1029 68.7
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 0.0e+00 1310.0 1028 68.2
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 0.0e+00 1309.3 1018 68.4
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 0.0e+00 1307.4 1024 68.8
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 0.0e+00 1306.6 1015 68.5
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 0.0e+00 1305.0 1026 68.0
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 0.0e+00 1302.0 1028 68.3
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 0.0e+00 1301.2 1022 68.2
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 0.0e+00 1300.4 1026 67.3
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 0.0e+00 1299.3 1025 67.8
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 0.0e+00 1297.0 1022 68.1
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 0.0e+00 1296.2 1027 67.5
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 0.0e+00 1295.8 1038 67.5
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 0.0e+00 1294.3 1028 67.1
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 0.0e+00 1291.6 1022 66.7
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 0.0e+00 1287.3 1027 67.3
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 0.0e+00 1282.7 1022 66.5
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 0.0e+00 1281.9 1022 66.8
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 0.0e+00 1281.5 1027 67.2
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 0.0e+00 1279.2 1024 67.0
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 0.0e+00 1278.5 1027 66.5
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 0.0e+00 1278.1 1028 66.8
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 0.0e+00 1275.0 1019 67.0
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 0.0e+00 1272.7 1011 67.2
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1272.3 1022 67.2
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 0.0e+00 1271.1 1027 66.2
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 0.0e+00 1265.8 1027 65.6
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1265.0 1022 66.9
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 0.0e+00 1265.0 1033 66.0
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 0.0e+00 1261.9 1014 66.7
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 0.0e+00 1261.5 1013 66.7
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 0.0e+00 1261.5 1013 66.5
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 0.0e+00 1261.5 1015 66.9
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 0.0e+00 1248.8 1025 64.3
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 0.0e+00 1246.1 1027 65.1
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 0.0e+00 1243.4 1029 65.5
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 0.0e+00 1236.5 1020 64.8
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 0.0e+00 1235.7 1049 64.5
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 0.0e+00 1228.4 1106 61.3
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 0.0e+00 1224.2 1014 65.9
MELO3C019825.2 Cucumis melo HOM05D003976 ORTHO05D004711 0.0e+00 1214.5 1089 60.9
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 0.0e+00 1214.1 1013 64.8
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 0.0e+00 1203.7 1054 62.6
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 0.0e+00 1198.7 1029 64.2
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 0.0e+00 1196.8 1012 65.0
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1196.0 1011 63.7
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 0.0e+00 1195.6 1020 63.6
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 0.0e+00 1191.4 1022 62.5
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1188.3 1015 63.7
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1188.3 1015 63.7
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 0.0e+00 1186.8 1020 62.4
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 0.0e+00 1186.4 1120 60.1
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 0.0e+00 1185.6 1021 62.7
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 0.0e+00 1184.5 942 67.4
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 0.0e+00 1183.3 1020 62.5
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1179.1 1020 62.3
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1178.3 1035 61.8
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1177.5 1031 61.7
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1177.5 1035 61.7
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 0.0e+00 1174.1 1021 62.8
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 0.0e+00 1167.5 1020 61.9
HPP92_022853 Vanilla planifolia HOM05D003976 ORTHO05D004711 0.0e+00 1167.5 1045 61.6
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1159.8 1012 61.4
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1156.0 1031 61.1
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 0.0e+00 1155.6 1101 59.1
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 0.0e+00 1155.2 1024 61.0
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1153.7 1046 59.8
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1152.9 1031 60.8
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 0.0e+00 1150.2 1021 61.4
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 0.0e+00 1148.3 936 66.2
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 0.0e+00 1147.9 1046 59.5
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1147.1 1011 60.8
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 0.0e+00 1147.1 1044 60.8
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1133.6 1000 61.1
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 0.0e+00 1133.2 1031 60.3
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1132.5 1019 60.5
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 0.0e+00 1120.5 1090 59.7
AUR62023345 Chenopodium quinoa HOM05D003976 ORTHO05D004711 0.0e+00 1102.0 1027 59.9
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1100.9 1022 61.4
AUR62013811 Chenopodium quinoa HOM05D003976 ORTHO05D004711 0.0e+00 1091.3 1051 59.1
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1085.5 1052 58.8
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 0.0e+00 1078.2 1023 58.4
Lsat_1_v5_gn_2_113061 Lactuca sativa HOM05D003976 ORTHO05D004711 1.0e-310 1070.1 1021 58.8
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 1.4e-307 1059.7 1117 56.8
Eucgr.K02187 Eucalyptus grandis HOM05D003976 ORTHO05D004711 1.4e-307 1059.7 883 65.5
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 3.2e-307 1058.5 1038 58.4
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 1.1e-296 1023.5 994 59.2
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 2.2e-292 1009.2 1191 52.0
unitig_46.g18603 Utricularia gibba HOM05D003976 ORTHO05D004711 3.2e-291 1005.4 1019 55.5
Hma1.2p1_0384F.1_g140840 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 1.8e-289 999.6 738 71.8
ATR0730G009 Amborella trichopoda HOM05D003976 ORTHO05D004711 9.7e-288 993.8 858 63.9
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.5e-285 986.5 1017 57.0
Mapoly0170s0008 Marchantia polymorpha HOM05D003976 ORTHO05D004711 4.8e-263 911.8 1038 51.7
Gohir.D10G210600 Gossypium hirsutum HOM05D003976 ORTHO05D004711 3.6e-258 895.6 854 58.5
Pp3c16_24260 Physcomitrium patens HOM05D003976 ORTHO05D004711 3.4e-256 889.0 1045 49.6
Gorai.011G236100 Gossypium raimondii HOM05D003976 ORTHO05D004711 1.2e-250 870.5 909 55.0
QL08p054317 Quercus lobata HOM05D003976 ORTHO05D004711 2.9e-244 849.4 725 64.6
Pp3c3_21120 Physcomitrium patens HOM05D003976 ORTHO05D004711 2.2e-239 833.2 1020 47.4
Pp3c12_15420 Physcomitrium patens HOM05D003976 ORTHO05D004711 3.3e-227 792.7 1012 45.5
SMO172G0221 Selaginella moellendorffii HOM05D003976 ORTHO05D004711 3.7e-223 779.2 991 46.1
CiPaw.02G172200 Carya illinoinensis HOM05D003976 ORTHO05D004711 3.5e-213 746.1 583 68.3
Actinidia18607 Actinidia chinensis HOM05D003976 ORTHO05D004711 1.9e-203 713.8 785 54.9
CDE10G0060 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 3.5e-197 693.0 389 92.8
Gohir.A10G202400 Gossypium hirsutum HOM05D003976 ORTHO05D004711 2.0e-192 677.2 704 55.8
BraA05t22668Z Brassica rapa HOM05D003976 ORTHO05D004711 7.1e-182 642.1 563 61.8
AagrBONN_evm.TU.Sc2ySwM_228.4637 Anthoceros agrestis HOM05D003976 ORTHO05D004711 1.3e-180 637.9 807 47.5
COL.COLO4_34215 Corchorus olitorius HOM05D003976 ORTHO05D004711 1.3e-180 637.9 567 63.0
Peaxi162Scf00145g01214 Petunia axillaris HOM05D003976 ORTHO05D004711 1.3e-172 611.3 558 60.4
Peaxi162Scf00145g01215 Petunia axillaris HOM05D003976 ORTHO05D004711 2.2e-170 604.0 469 67.2
arahy.Tifrunner.gnm1.ann1.WBL645 Arachis hypogaea HOM05D003976 ORTHO05D004711 6.3e-170 602.4 571 59.0
CBR_g30687 Chara braunii HOM05D003976 ORTHO05D004711 1.6e-157 561.2 1179 34.7
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 3.6e-149 533.5 846 42.7
COL.COLO4_34214 Corchorus olitorius HOM05D003976 ORTHO05D004711 2.3e-148 530.8 476 60.7
CAN.G321.62 Capsicum annuum HOM05D003976 ORTHO05D004711 2.9e-143 513.8 383 68.9
Hund17145 Selenicereus undatus HOM05D003976 ORTHO05D004711 4.2e-142 510.0 659 48.0
BraA05t22669Z Brassica rapa HOM05D003976 ORTHO05D004711 2.6e-139 500.7 409 64.5
CDE10G0443 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 2.2e-138 497.7 405 69.6
CiPaw.02G172100 Carya illinoinensis HOM05D003976 ORTHO05D004711 6.8e-132 476.1 372 68.3
Lalb_Chr21g0313681 Lupinus albus HOM05D003976 ORTHO05D004711 1.5e-102 378.6 303 67.7
QL08p054329 Quercus lobata HOM05D003976 ORTHO05D004711 1.1e-89 335.9 264 69.7
Rhsim03G0115800 Rhododendron simsii HOM05D003976 ORTHO05D004711 5.6e-86 323.6 309 60.2
Cpa.g.sc53.134 Carica papaya HOM05D003976 ORTHO05D004711 2.0e-83 315.1 345 55.1
vmacro00383 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 3.2e-81 307.8 316 59.2
Cpa.g.sc53.132 Carica papaya HOM05D003976 ORTHO05D004711 6.0e-80 303.5 272 62.9
Lalb_Chr21g0313551 Lupinus albus HOM05D003976 ORTHO05D004711 4.8e-77 293.9 236 67.8
BcaNung07314 Brassica carinata HOM05D003976 ORTHO05D004711 4.3e-70 270.8 176 75.6
VMungo0720G2709 Vigna mungo HOM05D003976 ORTHO05D004711 9.0e-68 263.1 175 76.6
HPP92_026132 Vanilla planifolia HOM05D003976 ORTHO05D004711 6.9e-60 236.9 144 78.5
ATR0730G060 Amborella trichopoda HOM05D003976 ORTHO05D004711 2.7e-56 224.9 139 79.1
Cc02_g10920 Coffea canephora HOM05D003976 ORTHO05D004711 2.5e-54 218.4 180 65.0
CDE10G0301 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 1.7e-53 215.7 115 97.4
PSO478G0690 Papaver somniferum HOM05D003976 ORTHO05D004711 2.5e-49 201.8 129 79.8
SEGI_25267 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 8.8e-47 193.4 139 69.1
vmacro00384 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.1e-44 186.4 108 84.3
TPR.G33031 Trifolium pratense HOM05D003976 ORTHO05D004711 3.5e-35 154.8 126 61.9
Actinidia18608 Actinidia chinensis HOM05D003976 ORTHO05D004711 1.3e-34 152.9 100 76.0
CAN.G796.1 Capsicum annuum HOM05D003976 ORTHO05D004711 2.3e-31 142.1 172 48.8
Psat7g009440 Pisum sativum HOM05D003976 ORTHO05D004711 3.3e-30 138.3 85 74.1
Gohir.D10G210566 Gossypium hirsutum HOM05D003976 ORTHO05D004711 7.5e-30 137.1 86 73.3
vmacro00385 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 8.2e-29 133.7 104 64.4
SHI08886 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-28 130.6 92 72.8
TPR.G28835 Trifolium pratense HOM05D003976 ORTHO05D004711 5.0e-26 124.4 79 72.2
SHI08885 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-25 122.5 79 68.4
Cre01.g003050 Chlamydomonas reinhardtii HOM05D003976 ORTHO05D004711 4.2e-25 121.3 205 34.1
Cc02_g10910 Coffea canephora HOM05D003976 ORTHO05D004711 8.0e-24 117.1 111 60.4
Lsat_1_v5_gn_4_4660 Lactuca sativa HOM05D003976 ORTHO05D004711 2.8e-21 108.6 166 44.0
Lj6g0023100 Lotus japonicus HOM05D003976 ORTHO05D004711 1.6e-19 102.8 103 54.4
Hma1.2p1_0384F.1_g140740 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 1.7e-18 99.4 87 65.5
Lsat_1_v5_gn_9_29220 Lactuca sativa HOM05D003976 ORTHO05D006024 6.1e-16 90.9 86 54.7
Lalb_Chr21g0313561 Lupinus albus HOM05D003976 ORTHO05D004711 1.3e-13 83.2 85 57.6
Lalb_Chr21g0313691 Lupinus albus HOM05D003976 ORTHO05D004711 1.3e-13 83.2 85 57.6
Prupe.5G231200 Prunus persica HOM05D003976 ORTHO05D004711 2.8e-13 82.0 100 47.0
Cc06_g17220 Coffea canephora HOM05D003976 ORTHO05D004711 8.3e-13 80.5 81 48.1
TPR.G6473 Trifolium pratense HOM05D003976 ORTHO05D004711 1.7e-10 72.8 48 75.0
Aa31LG6G7350 Aethionema arabicum HOM05D003976 ORTHO05D004711 2.9e-10 72.0 69 53.6
AL491U10010 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 6.6e-10 70.9 53 66.0
HanXRQChr05g0134171 Helianthus annuus HOM05D003976 ORTHO05D004711 4.0e-07 61.6 49 65.3
Lsat_1_v5_gn_6_63420 Lactuca sativa HOM05D003976 ORTHO05D004711 1.5e-06 59.7 65 46.2


User provided reference genes

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