Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 2.6e-264 914.8 472 100.0
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 4.1e-148 528.9 378 78.3
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 4.0e-127 459.1 519 52.2
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 2.7e-123 446.4 515 50.7
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 4.7e-120 435.6 513 51.1
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 3.2e-116 422.9 515 49.7
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 2.3e-114 416.8 515 49.3
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 3.0e-114 416.4 522 48.5
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 8.6e-114 414.8 511 49.5
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 1.9e-113 413.7 512 49.8
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 7.3e-113 411.8 517 48.5
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 6.2e-112 408.7 513 47.6
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 3.1e-111 406.4 510 48.6
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 1.2e-110 404.4 515 48.5
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 1.2e-110 404.4 515 48.5
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 2.6e-110 403.3 513 47.4
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 7.5e-110 401.7 515 48.0
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 1.3e-109 401.0 509 48.5
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 1.3e-109 401.0 515 48.3
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 4.9e-109 399.1 513 48.1
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 4.9e-109 399.1 521 48.9
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 1.1e-108 397.9 514 47.7
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 1.9e-108 397.1 516 47.1
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 2.4e-108 396.7 514 47.5
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 7.0e-108 395.2 508 47.2
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 7.0e-108 395.2 515 48.0
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 7.0e-108 395.2 516 47.3
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 7.0e-108 395.2 514 47.9
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 9.2e-108 394.8 514 46.9
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 9.2e-108 394.8 513 47.0
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 1.6e-107 394.0 514 47.7
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 4.6e-107 392.5 517 46.2
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 7.8e-107 391.7 512 48.2
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 1.0e-106 391.3 513 46.4
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 1.3e-106 391.0 517 46.6
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 2.3e-106 390.2 541 45.8
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 2.3e-106 390.2 510 46.9
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 8.6e-106 388.3 506 46.2
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 4.3e-105 386.0 516 45.9
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 4.3e-105 386.0 510 46.7
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 5.6e-105 385.6 504 47.2
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 9.5e-105 384.8 509 46.6
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 9.5e-105 384.8 517 46.2
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 4.0e-103 379.4 509 44.8
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 6.8e-103 378.6 513 45.2
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 8.9e-103 378.3 537 43.9
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 1.5e-102 377.5 506 46.0
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.5e-102 377.5 507 46.7
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 2.0e-102 377.1 506 45.8
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 2.6e-102 376.7 506 45.8
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 2.6e-102 376.7 513 47.0
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 4.4e-102 375.9 546 44.7
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 5.8e-102 375.6 509 45.4
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 9.9e-102 374.8 545 44.8
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.3e-101 374.4 507 46.5
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.7e-101 374.0 507 46.9
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 2.9e-101 373.2 509 45.6
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 1.1e-100 371.3 509 45.4
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 1.4e-100 370.9 506 45.3
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 1.4e-100 370.9 509 44.8
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 1.9e-100 370.5 506 45.3
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 5.4e-100 369.0 511 45.4
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 5.4e-100 369.0 512 45.3
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 7.1e-100 368.6 512 45.1
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 1.2e-99 367.9 532 43.6
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 4.6e-99 365.9 515 45.0
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 6.0e-99 365.5 509 43.2
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 1.0e-98 364.8 504 45.4
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 1.7e-98 364.0 511 45.6
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 5.1e-98 362.5 515 44.7
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 1.1e-97 361.3 514 46.1
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 2.5e-97 360.1 435 49.0
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 2.5e-97 360.1 521 44.5
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.2e-96 357.8 518 44.8
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 6.2e-96 355.5 532 43.2
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.1e-95 354.8 510 44.1
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 1.4e-95 354.4 514 43.8
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.8e-95 354.0 518 44.4
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 6.8e-95 352.1 514 43.4
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 4.4e-94 349.4 425 48.7
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 3.8e-93 346.3 531 43.1
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 4.9e-93 345.9 382 52.9
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 4.9e-93 345.9 516 42.4
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 1.9e-92 344.0 513 44.1
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 1.6e-91 340.9 511 44.6
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 3.5e-91 339.7 515 43.3
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 1.3e-90 337.8 373 53.1
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 2.3e-90 337.0 506 42.1
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 7.3e-89 332.0 479 45.7
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.4e-87 327.8 506 41.7
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 2.4e-87 327.0 520 43.1
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 8.4e-85 318.5 514 41.6
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 5.1e-82 309.3 507 38.1
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 1.1e-81 308.1 320 54.4
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 7.3e-81 305.4 507 38.5
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 6.2e-80 302.4 316 53.2
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 7.1e-76 288.9 473 42.7
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 4.3e-73 279.6 511 38.6
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 9.0e-71 271.9 316 50.3
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 2.5e-68 263.8 406 43.1
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 1.8e-66 257.7 379 42.7
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 9.6e-65 251.9 219 62.6
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 1.2e-62 245.0 244 56.6
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 3.4e-62 243.4 518 34.6
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 3.2e-60 236.9 378 41.5
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 2.8e-56 223.8 423 38.1
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 2.9e-53 213.8 370 39.2
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 1.7e-45 188.0 335 40.0
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 1.9e-44 184.5 481 30.6
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 6.7e-42 176.0 344 38.1
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 2.6e-38 164.1 154 59.1
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 3.6e-35 153.7 525 27.2
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 8.8e-34 149.1 182 48.4
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 5.5e-28 129.8 503 26.4
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 5.9e-22 109.8 123 53.7
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 4.2e-20 103.6 120 49.2
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 4.1e-15 87.0 84 56.0
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 2.7e-14 84.3 87 51.7
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 4.5e-14 83.6 81 54.3
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 1.7e-13 81.6 82 56.1
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 2.3e-13 81.3 81 54.3
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 8.6e-13 79.3 86 50.0
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 8.6e-13 79.3 515 21.6
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 6.1e-11 73.2 149 41.6
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 6.8e-10 69.7 106 35.8
SEGI_04453 Sequoiadendron giganteum HOM05D006261 ORTHO05D386652 9.2e-07 59.3 54 55.6
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 1.6e-06 58.5 426 23.5


User provided reference genes

Program Settings