Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G1000 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 4.1e-112 408.3 240 100.0
CDE10G0168 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 2.7e-47 193.0 147 86.4
TAR627G0113 Trochodendron aralioides HOM05D007781 ORTHO05D009769 5.9e-26 122.1 97 87.6
Dinv40553 Davidia involucrata HOM05D007781 ORTHO05D009769 4.6e-23 112.5 100 80.0
MD05G1313200 Malus domestica HOM05D007781 ORTHO05D009769 5.7e-21 105.5 99 77.8
MD10G1295400 Malus domestica HOM05D007781 ORTHO05D009769 1.3e-20 104.4 99 76.8
Hma1.2p1_0126F.1_g059410 Hydrangea macrophylla HOM05D007781 ORTHO05D009769 2.4e-19 100.1 97 76.3
Ciclev10017149m.g Citrus clementina HOM05D007781 ORTHO05D009769 3.1e-19 99.8 99 75.8
Prupe.4G046600 Prunus persica HOM05D007781 ORTHO05D009769 4.1e-19 99.4 99 76.8
Actinidia05631 Actinidia chinensis HOM05D007781 ORTHO05D009769 6.9e-19 98.6 95 81.1
Thecc.06G188400 Theobroma cacao HOM05D007781 ORTHO05D009769 6.9e-19 98.6 97 74.2
RcHm_v2.0_Chr5g0008291 Rosa chinensis HOM05D007781 ORTHO05D009769 9.1e-19 98.2 97 76.3
GSVIVG01003209001 Vitis vinifera HOM05D007781 ORTHO05D009769 1.5e-18 97.4 91 80.2
Duzib235G1462 Durio zibethinus HOM05D007781 ORTHO05D009769 2.0e-18 97.1 102 71.6
FvH4_3g09310 Fragaria vesca HOM05D007781 ORTHO05D009769 2.0e-18 97.1 97 76.3
FAN11G2776 Fragaria x ananassa HOM05D007781 ORTHO05D009769 2.0e-18 97.1 97 76.3
FAN21G0375 Fragaria x ananassa HOM05D007781 ORTHO05D009769 2.0e-18 97.1 97 76.3
Cc02_g13310 Coffea canephora HOM05D007781 ORTHO05D009769 3.4e-18 96.3 104 73.1
Gohir.A05G161900 Gossypium hirsutum HOM05D007781 ORTHO05D009769 3.4e-18 96.3 97 73.2
Gohir.D05G164700 Gossypium hirsutum HOM05D007781 ORTHO05D009769 3.4e-18 96.3 97 73.2
Gorai.009G169900 Gossypium raimondii HOM05D007781 ORTHO05D009769 7.7e-18 95.1 154 53.9
FAN16G0963 Fragaria x ananassa HOM05D007781 ORTHO05D009769 1.0e-17 94.7 97 75.3
CiPaw.09G059400 Carya illinoinensis HOM05D007781 ORTHO05D009769 2.9e-17 93.2 97 75.3
Nitab4.5_0003432g0040 Nicotiana tabacum HOM05D007781 ORTHO05D009769 3.8e-17 92.8 134 59.0
Manes.16G027000 Manihot esculenta HOM05D007781 ORTHO05D009769 1.9e-16 90.5 97 73.2
CsaV3_1G012280 Cucumis sativus L. HOM05D007781 ORTHO05D009769 2.5e-16 90.1 104 68.3
Lj4g0009430 Lotus japonicus HOM05D007781 ORTHO05D009769 3.2e-16 89.7 93 74.2
Nitab4.5_0007940g0030 Nicotiana tabacum HOM05D007781 ORTHO05D009769 3.2e-16 89.7 106 70.8
PGSC0003DMG400029720 Solanum tuberosum HOM05D007781 ORTHO05D009769 4.2e-16 89.4 106 71.7
Glyma.07G196200 Glycine max HOM05D007781 ORTHO05D009769 5.5e-16 89.0 93 73.1
Sed0016416 Sechium edule HOM05D007781 ORTHO05D009769 5.5e-16 89.0 96 72.9
Sc17g0006220 Simmondsia chinensis HOM05D007781 ORTHO05D009769 7.2e-16 88.6 102 70.6
TPR.G12128 Trifolium pratense HOM05D007781 ORTHO05D009769 7.2e-16 88.6 94 72.3
HPP92_027869 Vanilla planifolia HOM05D007781 ORTHO05D009769 7.2e-16 88.6 171 49.7
Sp7g19740 Schrenkiella parvula HOM05D007781 ORTHO05D009769 9.4e-16 88.2 91 79.1
ClCG03G006020 Citrullus lanatus HOM05D007781 ORTHO05D009769 1.2e-15 87.8 104 69.2
Nn1g06568 Nelumbo nucifera HOM05D007781 ORTHO05D009769 1.2e-15 87.8 93 76.3
Psat7g113680 Pisum sativum HOM05D007781 ORTHO05D009769 1.6e-15 87.4 97 70.1
MELO3C002600.2 Cucumis melo HOM05D007781 ORTHO05D009769 2.1e-15 87.0 99 70.7
CANSAT35G1759 Cannabis sativa HOM05D007781 ORTHO05D009769 3.6e-15 86.3 97 74.2
Thhalv10026412m.g Eutrema salsugineum HOM05D007781 ORTHO05D009769 4.7e-15 85.9 92 77.2
A08p15070 Brassica napus HOM05D007781 ORTHO05D009769 6.1e-15 85.5 88 78.4
C03p83160 Brassica napus HOM05D001541 ORTHO05D009769 6.1e-15 85.5 88 78.4
PGR042G1810 Punica granatum HOM05D007781 ORTHO05D009769 6.1e-15 85.5 159 52.8
COL.COLO4_31480 Corchorus olitorius HOM05D007781 ORTHO05D009769 7.9e-15 85.1 98 64.3
Haze_06475 Corylus avellana HOM05D007781 ORTHO05D009769 7.9e-15 85.1 98 67.3
Potri.004G043100 Populus trichocarpa HOM05D007781 ORTHO05D009769 7.9e-15 85.1 97 72.2
Sabra04G0026700 Salix brachista HOM05D007781 ORTHO05D009769 1.8e-14 84.0 97 72.2
Sopen02g023130 Solanum pennellii HOM05D007781 ORTHO05D009769 1.8e-14 84.0 173 51.4
THA.LOC104812795 Tarenaya hassleriana HOM05D007781 ORTHO05D009769 1.8e-14 84.0 86 77.9
CAN.G1164.27 Capsicum annuum HOM05D007781 ORTHO05D009769 2.3e-14 83.6 159 52.2
Phvul.002G234100 Phaseolus vulgaris HOM05D007781 ORTHO05D009769 3.0e-14 83.2 87 73.6
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 3.9e-14 82.8 88 77.3
CARHR228320 Cardamine hirsuta HOM05D007781 ORTHO05D009769 5.1e-14 82.4 97 70.1
VMungo0251G3178 Vigna mungo HOM05D007781 ORTHO05D009769 6.7e-14 82.0 87 72.4
BcaC01g00689 Brassica carinata HOM05D001738 ORTHO05D001644 8.8e-14 81.6 88 75.0
BolC3t20599H Brassica oleracea HOM05D007781 ORTHO05D009769 8.8e-14 81.6 88 75.0
PSO541G0656 Papaver somniferum HOM05D007781 ORTHO05D009769 8.8e-14 81.6 95 71.6
PSO675G6168 Papaver somniferum HOM05D007781 ORTHO05D009769 2.0e-13 80.5 95 71.6
Aa31LG6G3610 Aethionema arabicum HOM05D007781 ORTHO05D009769 4.4e-13 79.3 157 51.0
Solyc02g078270.3 Solanum lycopersicum HOM05D007781 ORTHO05D009769 4.4e-13 79.3 173 51.4
Eucgr.E03314 Eucalyptus grandis HOM05D007781 ORTHO05D009769 7.4e-13 78.6 91 68.1
Oeu053970.1 Olea europaea HOM05D007781 ORTHO05D009769 7.4e-13 78.6 141 52.5
AT4G21610 Arabidopsis thaliana HOM05D007781 ORTHO05D009769 2.2e-12 77.0 93 72.0
AL7G32390 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.8e-12 76.6 93 71.0
Hund21227 Selenicereus undatus HOM05D007781 ORTHO05D009769 2.8e-12 76.6 96 69.8
arahy.Tifrunner.gnm1.ann1.KV0YZV Arachis hypogaea HOM05D007781 ORTHO05D009769 3.7e-12 76.3 87 73.6
arahy.Tifrunner.gnm1.ann1.QC0LUE Arachis hypogaea HOM05D007781 ORTHO05D009769 3.7e-12 76.3 87 73.6
Lsat_1_v5_gn_7_21141 Lactuca sativa HOM05D007781 ORTHO05D009769 3.7e-12 76.3 117 59.8
Aqoxy1G02434 Aquilegia oxysepala HOM05D007781 ORTHO05D009769 6.3e-12 75.5 119 58.0
Lalb_Chr16g0383721 Lupinus albus HOM05D007781 ORTHO05D009769 1.1e-11 74.7 90 71.1
SGA_v2.0_scaffold49G18292 Striga asiatica HOM05D007781 ORTHO05D009769 1.1e-11 74.7 155 51.0
DCAR_028076 Daucus carota HOM05D007781 ORTHO05D009769 2.4e-11 73.6 40 77.5
Os01g0612700 Oryza sativa ssp. japonica HOM05D021202 ORTHO05D009769 2.4e-11 73.6 155 51.0
Medtr4g088850 Medicago truncatula HOM05D007781 ORTHO05D009769 4.1e-11 72.8 43 72.1
Peaxi162Scf00736g00429 Petunia axillaris HOM05D007781 ORTHO05D009769 5.3e-11 72.4 68 52.9
Carub.0007s1977 Capsella rubella HOM05D007781 ORTHO05D009769 6.9e-11 72.0 92 70.7
MSTRG.14698 Avicennia marina HOM05D007781 ORTHO05D009769 5.9e-10 68.9 162 49.4
TWI38G0207 Tripterygium wilfordii HOM05D007781 ORTHO05D009769 3.8e-09 66.2 39 71.8
Migut.H01490 Erythranthe guttata HOM05D007781 ORTHO05D009769 5.0e-09 65.9 82 70.7
Ah.14g089440 Amaranthus hybridus HOM05D007781 ORTHO05D009769 1.4e-08 64.3 43 67.4
CSS0040858 Camellia sinensis var. sinensis HOM05D007781 ORTHO05D009769 2.5e-08 63.5 39 66.7
MELO3C007039.2 Cucumis melo HOM05D002138 ORTHO05D002106 1.2e-07 61.2 84 60.7
Lj1A1206T64 Lonicera japonica HOM05D021202 ORTHO05D009769 2.1e-07 60.5 96 36.5
Cfa000439 Carpinus fangiana HOM05D007781 ORTHO05D009769 2.7e-07 60.1 106 35.8
ECA236G0601 Erigeron canadensis HOM05D007781 ORTHO05D009769 2.7e-07 60.1 53 50.9
HanXRQChr04g0124061 Helianthus annuus HOM05D007781 ORTHO05D009769 2.7e-07 60.1 164 47.6
Sed0017721 Sechium edule HOM05D007781 ORTHO05D009769 6.1e-07 58.9 40 62.5
Gohir.A11G117400 Gossypium hirsutum HOM05D007781 ORTHO05D009769 8.0e-07 58.5 44 56.8
HanXRQChr12g0358431 Helianthus annuus HOM05D002138 ORTHO05D002106 8.0e-07 58.5 102 56.9
SHI01775 Sapria himalayana HOM05D007781 ORTHO05D009769 8.0e-07 58.5 40 65.0
TAR627G0773 Trochodendron aralioides HOM05D002138 ORTHO05D002106 1.0e-06 58.2 98 60.2
vmacro14163 Vaccinium macrocarpon HOM05D007781 ORTHO05D009769 1.0e-06 58.2 40 60.0
Cpa.g.sc832.2 Carica papaya HOM05D002138 ORTHO05D002106 3.0e-06 56.6 80 62.5
vmacro00338 Vaccinium macrocarpon HOM05D007781 ORTHO05D002106 3.0e-06 56.6 39 59.0
Nitab4.5_0000378g0080 Nicotiana tabacum HOM05D002138 ORTHO05D002106 6.7e-06 55.5 34 61.8
Nitab4.5_0001298g0030 Nicotiana tabacum HOM05D002138 ORTHO05D002106 6.7e-06 55.5 34 61.8
Sabra16G0299000 Salix brachista HOM05D002138 ORTHO05D002106 6.7e-06 55.5 96 55.2
FAN21G3756 Fragaria x ananassa HOM05D002138 ORTHO05D002106 8.8e-06 55.1 50 48.0


User provided reference genes

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