Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 4.0e-193 677.9 348 100.0
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 1.8e-148 529.6 378 78.3
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 3.2e-105 386.0 350 58.3
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 9.5e-102 374.4 348 58.3
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 2.8e-101 372.9 348 56.9
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 7.0e-97 358.2 350 55.4
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 1.3e-95 354.0 348 54.3
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 6.2e-93 345.1 350 54.6
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 4.0e-92 342.4 346 54.3
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 8.9e-92 341.3 347 55.0
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 1.2e-91 340.9 350 52.9
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.5e-91 340.5 350 52.9
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 1.7e-90 337.0 355 53.2
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 2.2e-90 336.7 349 52.4
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 2.2e-90 336.7 347 54.8
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 6.4e-90 335.1 350 52.6
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 6.4e-90 335.1 348 54.0
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 9.2e-89 331.3 350 52.0
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 1.2e-88 330.9 348 50.3
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 1.6e-88 330.5 349 53.6
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 1.6e-88 330.5 347 53.0
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 2.1e-88 330.1 349 51.3
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 2.7e-88 329.7 349 53.0
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 6.0e-88 328.6 348 51.7
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 1.0e-87 327.8 340 52.4
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 1.3e-87 327.4 349 52.1
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 3.0e-87 326.2 349 52.1
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 3.0e-87 326.2 349 51.0
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 5.1e-87 325.5 344 53.8
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 8.6e-87 324.7 343 54.2
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 8.6e-87 324.7 349 49.6
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 8.6e-87 324.7 348 52.0
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 1.1e-86 324.3 350 51.4
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 1.1e-86 324.3 350 51.4
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.9e-86 323.6 348 51.1
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 1.9e-86 323.6 348 52.3
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 2.5e-86 323.2 349 50.7
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 2.5e-86 323.2 348 51.1
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 5.6e-86 322.0 349 50.1
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 7.3e-86 321.6 348 52.3
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 9.5e-86 321.2 354 50.0
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 1.2e-85 320.9 349 50.7
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 2.1e-85 320.1 374 49.2
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 2.8e-85 319.7 344 51.5
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 8.1e-85 318.2 340 50.6
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 8.1e-85 318.2 350 50.6
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 1.1e-84 317.8 340 50.6
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.1e-84 317.8 340 50.9
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 1.8e-84 317.0 365 49.9
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 2.3e-84 316.6 365 49.9
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 5.2e-84 315.5 340 50.3
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 6.8e-84 315.1 348 50.3
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 6.8e-84 315.1 349 51.3
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 8.9e-84 314.7 341 50.7
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 3.4e-83 312.8 344 50.9
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.7e-82 310.5 335 49.3
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 3.7e-82 309.3 344 50.6
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 3.7e-82 309.3 341 50.1
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 4.9e-82 308.9 341 49.9
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 6.4e-82 308.5 342 49.7
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 8.4e-82 308.1 335 49.0
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 1.1e-81 307.8 341 50.1
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 2.4e-81 306.6 340 50.3
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 2.4e-81 306.6 348 48.9
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 7.1e-81 305.1 339 49.3
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 2.1e-80 303.5 341 49.3
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 2.7e-80 303.1 341 49.3
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 3.5e-80 302.8 346 49.4
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 7.8e-80 301.6 344 48.3
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 1.0e-79 301.2 347 49.3
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 1.3e-79 300.8 349 48.4
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 1.7e-79 300.4 344 49.1
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 2.3e-79 300.1 351 49.0
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 6.6e-79 298.5 344 48.3
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 4.3e-78 295.8 347 47.8
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 9.6e-78 294.7 339 48.7
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 9.6e-78 294.7 349 49.6
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 2.1e-77 293.5 340 50.3
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 3.6e-77 292.7 344 49.4
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 4.7e-77 292.4 353 48.2
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 8.1e-77 291.6 370 43.8
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 1.1e-76 291.2 346 48.6
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 1.4e-76 290.8 331 50.5
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 1.4e-76 290.8 346 46.8
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 1.4e-76 290.8 345 47.8
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.8e-76 290.4 342 48.0
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 4.0e-76 289.3 342 46.2
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 5.2e-76 288.9 354 47.2
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 2.0e-75 287.0 347 47.3
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 6.4e-74 282.0 347 46.4
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 1.4e-73 280.8 349 44.4
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 1.9e-73 280.4 336 44.0
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 4.2e-73 279.3 345 47.2
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 3.9e-71 272.7 341 45.7
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 5.1e-71 272.3 341 45.7
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 1.6e-69 267.3 311 50.5
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 2.1e-69 266.9 340 41.5
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 1.1e-68 264.6 299 49.8
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 3.1e-68 263.1 339 44.0
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 2.9e-66 256.5 287 48.1
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 2.1e-64 250.4 248 54.8
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 3.4e-59 233.0 239 50.6
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 2.6e-51 206.8 179 57.5
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 1.9e-49 200.7 185 55.7
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 8.2e-45 185.3 180 52.8
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 3.6e-40 169.9 352 32.7
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 4.6e-40 169.5 361 32.1
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 2.0e-35 154.1 359 32.3
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 4.4e-30 136.3 129 55.8
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 4.8e-29 132.9 205 41.0
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 3.6e-24 116.7 434 26.7
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 2.2e-21 107.5 84 67.9
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 5.3e-20 102.8 361 26.9
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 2.7e-16 90.5 79 59.5
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 1.0e-15 88.6 80 61.2
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 1.4e-15 88.2 79 59.5
CDE10G0287 Ceratophyllum demersum HOM05D006261 ORTHO05D129350 1.8e-12 77.8 40 95.0
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 5.9e-11 72.8 359 21.4
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 1.0e-10 72.0 57 63.2
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 3.8e-10 70.1 56 60.7
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 9.4e-09 65.5 368 23.6
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 4.4e-06 56.6 72 40.3
SEGI_04453 Sequoiadendron giganteum HOM05D006261 ORTHO05D386652 9.8e-06 55.5 40 65.0


User provided reference genes

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