Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 3.0e-168 595.1 301 100.0
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 2.4e-93 346.3 194 90.2
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 1.1e-74 284.3 250 58.4
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 1.8e-72 276.9 271 56.5
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 4.0e-72 275.8 296 50.7
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 2.6e-71 273.1 230 59.6
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 4.4e-71 272.3 258 56.6
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 7.5e-71 271.6 229 58.5
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.7e-70 269.2 240 58.8
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 4.9e-70 268.9 297 51.5
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 4.9e-70 268.9 240 58.3
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 6.3e-70 268.5 233 57.1
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 8.3e-70 268.1 244 56.6
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 1.4e-69 267.3 243 54.3
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 1.4e-69 267.3 266 54.5
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.4e-69 267.3 311 48.2
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.8e-69 266.9 260 54.2
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 1.8e-69 266.9 305 51.8
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 2.4e-69 266.5 258 54.7
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 3.1e-69 266.2 262 53.8
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 5.4e-69 265.4 248 55.6
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 7.0e-69 265.0 275 51.3
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 7.0e-69 265.0 282 50.4
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.6e-68 263.8 240 59.2
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 1.6e-68 263.8 238 56.7
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 2.7e-68 263.1 269 52.4
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 4.5e-68 262.3 269 52.4
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 5.9e-68 261.9 227 58.6
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 7.8e-68 261.5 238 55.5
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 1.0e-67 261.2 301 49.8
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 1.3e-67 260.8 290 50.7
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 2.3e-67 260.0 290 50.3
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 3.8e-67 259.2 230 57.8
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 5.0e-67 258.8 237 55.7
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 6.6e-67 258.5 217 59.9
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 6.6e-67 258.5 223 57.0
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 6.6e-67 258.5 309 48.2
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 8.6e-67 258.1 223 57.0
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 1.5e-66 257.3 215 61.4
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 1.9e-66 256.9 278 51.1
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 3.3e-66 256.1 271 53.1
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 4.3e-66 255.8 215 59.1
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 4.3e-66 255.8 296 48.6
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 9.5e-66 254.6 224 54.9
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 2.1e-65 253.4 275 49.8
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 2.8e-65 253.1 250 54.0
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 2.8e-65 253.1 243 54.3
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.6e-65 252.7 248 55.6
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 4.7e-65 252.3 240 54.2
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 4.7e-65 252.3 225 54.7
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 4.7e-65 252.3 293 50.9
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 6.1e-65 251.9 228 55.7
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 1.0e-64 251.1 284 48.9
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 1.0e-64 251.1 238 53.8
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 1.0e-64 251.1 221 57.5
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 1.4e-64 250.8 322 46.3
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 1.8e-64 250.4 208 58.2
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 1.8e-64 250.4 324 47.2
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 2.3e-64 250.0 246 54.9
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 3.0e-64 249.6 306 46.4
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 4.0e-64 249.2 300 48.0
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 5.2e-64 248.8 245 53.9
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 5.2e-64 248.8 229 55.5
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 6.8e-64 248.4 212 57.1
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 6.8e-64 248.4 255 52.2
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 6.8e-64 248.4 206 59.2
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 8.9e-64 248.1 290 47.2
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 8.9e-64 248.1 216 56.0
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 8.9e-64 248.1 216 56.0
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 8.9e-64 248.1 212 56.6
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 1.2e-63 247.7 296 47.0
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 1.5e-63 247.3 311 45.7
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 2.6e-63 246.5 304 46.1
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 2.6e-63 246.5 251 53.8
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 3.4e-63 246.1 245 51.4
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 4.4e-63 245.7 214 55.6
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 4.4e-63 245.7 282 47.9
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 7.5e-63 245.0 321 47.0
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 9.8e-63 244.6 214 56.1
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 1.7e-62 243.8 262 48.9
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 4.9e-62 242.3 220 55.5
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 1.1e-61 241.1 224 53.6
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 1.1e-61 241.1 237 54.4
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 1.1e-61 241.1 290 47.6
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 1.4e-61 240.7 224 54.9
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 1.2e-60 237.7 212 55.7
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 3.5e-60 236.1 251 51.0
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 4.6e-60 235.7 296 45.6
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 6.0e-60 235.3 314 46.5
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 3.9e-59 232.6 284 49.3
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 5.0e-59 232.3 182 63.2
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 6.6e-59 231.9 200 60.5
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 1.1e-58 231.1 305 48.9
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 9.5e-58 228.0 257 46.3
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 9.5e-58 228.0 247 49.8
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 3.6e-57 226.1 200 55.0
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 3.6e-57 226.1 200 55.0
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 5.2e-56 222.2 325 43.7
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 6.8e-56 221.9 175 64.0
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 6.8e-56 221.9 325 44.3
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.2e-55 221.1 332 43.1
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 2.0e-55 220.3 330 40.9
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 1.7e-54 217.2 212 56.1
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.9e-54 215.7 257 46.7
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 1.2e-52 211.1 255 46.3
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 2.3e-48 196.8 233 47.2
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 8.9e-48 194.9 210 48.1
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 3.4e-47 193.0 248 47.2
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 3.4e-47 193.0 138 69.6
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 4.4e-47 192.6 264 40.5
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 1.7e-46 190.7 227 47.6
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 7.8e-44 181.8 231 43.7
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 1.6e-41 174.1 151 59.6
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 2.4e-40 170.2 230 42.2
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 2.4e-40 170.2 230 42.2
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 7.6e-39 165.2 213 42.3
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 2.4e-32 143.7 177 48.6
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 2.4e-32 143.7 194 41.8
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 6.4e-30 135.6 218 39.9
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 7.1e-29 132.1 247 36.4
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 1.8e-24 117.5 171 43.9
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 5.4e-21 105.9 72 70.8
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 1.8e-19 100.9 90 55.6
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 5.1e-11 72.8 73 53.4
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 4.8e-09 66.2 121 30.6


User provided reference genes

Program Settings