Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 2.2e-304 1048.1 523 100.0
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 4.2e-93 346.3 470 43.0
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 8.4e-86 322.0 464 41.2
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.5e-82 311.2 470 38.5
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 2.5e-82 310.5 442 42.3
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 9.0e-80 302.0 432 39.1
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 7.1e-77 292.4 443 39.7
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 1.2e-76 291.6 438 39.3
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 2.1e-76 290.8 478 38.3
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 6.7e-75 285.8 496 35.1
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 6.2e-73 279.3 440 39.1
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 2.4e-72 277.3 430 39.3
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 9.0e-72 275.4 436 37.8
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 2.0e-71 274.2 456 36.8
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 1.7e-70 271.2 443 38.1
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 2.9e-70 270.4 443 37.9
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 8.4e-70 268.9 435 39.3
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 1.1e-69 268.5 443 37.9
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 7.1e-69 265.8 441 37.9
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 1.2e-68 265.0 478 36.0
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 4.6e-68 263.1 442 37.8
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 1.3e-67 261.5 438 35.8
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 3.9e-67 260.0 441 37.2
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 3.9e-67 260.0 433 36.5
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 1.9e-66 257.7 469 36.5
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 3.3e-66 256.9 439 36.2
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 3.7e-65 253.4 432 35.9
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 9.0e-64 248.8 433 34.9
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 1.2e-63 248.4 457 37.0
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 1.5e-63 248.1 448 35.9
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 3.4e-63 246.9 432 37.0
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 4.5e-63 246.5 445 37.5
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 4.5e-63 246.5 457 37.6
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 1.0e-62 245.4 432 36.3
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 1.3e-62 245.0 440 36.8
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 5.0e-62 243.0 483 33.5
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 5.0e-62 243.0 534 33.0
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 8.5e-62 242.3 436 36.0
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 1.4e-61 241.5 516 32.8
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 1.9e-61 241.1 447 36.0
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 2.5e-61 240.7 567 31.4
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 3.2e-61 240.4 506 34.6
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 3.2e-61 240.4 447 36.2
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 5.5e-61 239.6 448 35.0
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 2.7e-60 237.3 444 35.6
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 4.6e-60 236.5 448 34.8
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 1.4e-59 235.0 420 35.7
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 1.4e-59 235.0 451 34.1
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 2.3e-59 234.2 486 34.8
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 2.3e-59 234.2 431 35.5
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 2.3e-59 234.2 436 36.0
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 2.3e-59 234.2 476 33.6
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 1.1e-58 231.9 442 35.5
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 4.3e-58 229.9 449 33.2
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 1.3e-57 228.4 452 33.8
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 2.2e-57 227.6 435 34.7
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 2.2e-57 227.6 431 35.5
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 3.7e-57 226.9 496 34.5
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 3.7e-57 226.9 412 35.7
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 6.3e-57 226.1 459 33.8
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 1.4e-56 224.9 435 36.6
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 4.1e-56 223.4 432 35.0
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 5.3e-56 223.0 439 35.1
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 9.1e-56 222.2 436 34.2
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 3.4e-55 220.3 436 34.2
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 4.5e-55 219.9 472 32.6
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 1.0e-54 218.8 442 35.1
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 8.5e-54 215.7 447 33.3
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 8.5e-54 215.7 391 35.0
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 3.2e-53 213.8 475 32.8
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 7.2e-53 212.6 431 32.7
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 1.8e-51 208.0 451 31.9
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 2.3e-51 207.6 431 32.5
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 3.0e-51 207.2 423 34.3
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 1.5e-50 204.9 371 35.0
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 3.3e-50 203.8 448 32.6
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 4.4e-50 203.4 467 31.5
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 1.3e-49 201.8 442 32.4
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 8.2e-49 199.1 444 33.1
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 2.4e-48 197.6 326 38.0
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 5.3e-48 196.4 443 30.2
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 1.7e-46 191.4 346 34.7
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 6.5e-46 189.5 518 29.7
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 1.9e-45 188.0 402 33.1
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 1.8e-43 181.4 317 33.8
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 2.3e-43 181.0 560 28.6
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 2.3e-43 181.0 486 29.6
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 2.3e-43 181.0 349 33.5
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 2.6e-42 177.6 379 33.5
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 6.5e-38 162.9 449 28.7
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 8.5e-38 162.5 424 29.0
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 1.9e-37 161.4 428 29.4
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 1.9e-37 161.4 418 29.4
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 4.2e-37 160.2 300 36.7
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 4.2e-37 160.2 442 29.9
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 4.7e-36 156.8 430 28.8
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 8.0e-36 156.0 427 30.0
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 8.0e-36 156.0 340 35.6
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 1.0e-35 155.6 424 28.3
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 1.8e-35 154.8 431 28.8
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 6.7e-35 152.9 424 27.8
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 1.2e-34 152.1 435 28.5
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 2.0e-34 151.4 158 48.1
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 2.6e-34 151.0 462 27.7
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 7.5e-34 149.4 424 27.6
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 7.5e-34 149.4 424 27.6
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 9.7e-34 149.1 138 47.1
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 9.7e-34 149.1 418 28.7
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 3.7e-33 147.1 377 30.0
Mapoly0139s0008 Marchantia polymorpha HOM05D004843 ORTHO05D005833 2.4e-32 144.4 440 28.0
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 3.1e-32 144.1 464 26.9
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 9.1e-32 142.5 319 31.0
Thecc.07G102300 Theobroma cacao HOM05D004843 ORTHO05D005833 2.0e-31 141.4 159 45.3
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 1.3e-30 138.7 148 45.3
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 1.5e-29 135.2 437 27.9
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 6.1e-28 129.8 293 31.4
CAN.G349.3 Capsicum annuum HOM05D004843 ORTHO05D005833 1.6e-23 115.2 253 34.0
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 4.5e-23 113.6 117 48.7
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 1.7e-22 111.7 97 52.6
Ca_04025_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 1.7e-22 111.7 157 38.9
Atru.chr2.140 Acer truncatum HOM05D004843 ORTHO05D005833 1.9e-21 108.2 120 44.2
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 7.2e-21 106.3 115 45.2
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 4.4e-18 97.1 149 39.6
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis HOM05D004843 ORTHO05D005833 2.4e-16 91.3 317 26.2
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 1.2e-15 89.0 136 39.7
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 5.0e-14 83.6 133 37.6
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 8.6e-14 82.8 78 46.2
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 1.1e-13 82.4 105 43.8
MBI02_g30879_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 2.8e-12 77.8 177 31.6
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 3.6e-12 77.4 226 28.8
SHI27676 Sapria himalayana HOM05D004843 ORTHO05D005833 4.0e-11 73.9 253 23.3
AagrBONN_evm.TU.Sc2ySwM_228.3857 Anthoceros agrestis HOM05D004843 ORTHO05D005833 5.8e-10 70.1 351 23.9
Oeu052598.1 Olea europaea HOM05D004843 ORTHO05D005833 3.9e-06 57.4 89 33.7


User provided reference genes

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