Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 2.4e-56 221.9 106 100.0
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.7e-46 189.1 90 97.8
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 2.8e-20 102.1 91 53.8
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.8e-19 99.4 95 53.7
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 3.1e-19 98.6 95 55.8
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 3.1e-19 98.6 88 58.0
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 4.0e-19 98.2 96 53.1
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 5.2e-19 97.8 97 51.5
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 6.8e-19 97.4 90 55.6
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 8.9e-19 97.1 90 52.2
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 8.9e-19 97.1 95 54.7
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 1.5e-18 96.3 88 53.4
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 1.5e-18 96.3 90 54.4
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.5e-18 96.3 91 56.0
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 1.5e-18 96.3 96 50.0
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 2.0e-18 95.9 101 52.5
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 2.6e-18 95.5 91 54.9
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 3.4e-18 95.1 88 54.5
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 3.4e-18 95.1 90 54.4
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 5.8e-18 94.4 98 51.0
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 7.5e-18 94.0 90 55.6
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 9.8e-18 93.6 94 50.0
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.3e-17 93.2 89 53.9
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 1.7e-17 92.8 90 50.0
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 2.9e-17 92.0 93 54.8
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 3.7e-17 91.7 95 48.4
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.7e-17 91.7 95 48.4
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.7e-17 91.7 94 50.0
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 6.4e-17 90.9 90 50.0
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 8.3e-17 90.5 97 48.5
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 8.3e-17 90.5 94 47.9
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 8.3e-17 90.5 102 46.1
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 1.1e-16 90.1 89 53.9
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 1.1e-16 90.1 93 52.7
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 1.1e-16 90.1 99 48.5
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.4e-16 89.7 101 45.5
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 1.4e-16 89.7 92 51.1
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.9e-16 89.4 102 45.1
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 1.9e-16 89.4 88 51.1
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 1.9e-16 89.4 104 44.2
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 3.2e-16 88.6 91 48.4
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 3.2e-16 88.6 89 52.8
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 4.1e-16 88.2 104 43.3
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 5.4e-16 87.8 105 45.7
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 5.4e-16 87.8 88 48.9
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 7.1e-16 87.4 93 53.8
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 9.2e-16 87.0 89 49.4
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 9.2e-16 87.0 96 47.9
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 1.2e-15 86.7 93 45.2
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.2e-15 86.7 91 53.8
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 1.2e-15 86.7 94 51.1
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 1.6e-15 86.3 93 49.5
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 1.6e-15 86.3 103 44.7
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 1.6e-15 86.3 106 47.2
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 2.1e-15 85.9 107 44.9
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 2.1e-15 85.9 88 50.0
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 2.7e-15 85.5 92 52.2
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.5e-15 85.1 103 45.6
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 6.0e-15 84.3 103 45.6
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 6.0e-15 84.3 103 44.7
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 7.8e-15 84.0 106 42.5
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.0e-14 83.6 103 42.7
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.3e-14 83.2 103 44.7
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 1.7e-14 82.8 89 49.4
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 5.1e-14 81.3 120 37.5
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 9.5e-13 77.0 92 48.9
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 1.2e-12 76.6 88 50.0
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 1.6e-12 76.3 110 40.9
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 2.1e-12 75.9 90 47.8
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 2.1e-12 75.9 89 49.4
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 2.8e-12 75.5 94 44.7
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 2.8e-12 75.5 91 49.5
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 2.3e-11 72.4 111 39.6
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 5.8e-10 67.8 93 37.6
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 1.7e-09 66.2 88 44.3
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 2.2e-09 65.9 67 53.7
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 1.2e-07 60.1 80 43.8


User provided reference genes

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