Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 5.4e-84 314.3 162 100.0
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 3.2e-68 261.9 162 85.2
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 5.3e-47 191.4 161 62.7
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 2.1e-43 179.5 181 56.4
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 3.6e-43 178.7 162 60.5
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 4.6e-43 178.3 165 61.2
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 4.6e-43 178.3 164 57.9
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 6.1e-43 177.9 156 57.7
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 7.9e-43 177.6 165 60.6
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 1.7e-40 169.9 179 53.1
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 4.8e-40 168.3 163 56.4
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 3.1e-39 165.6 175 52.6
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 4.1e-39 165.2 172 52.3
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 5.3e-39 164.9 178 53.9
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 5.3e-39 164.9 178 53.9
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 9.1e-39 164.1 169 56.8
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 1.5e-38 163.3 176 52.3
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 5.9e-38 161.4 166 56.0
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 5.9e-38 161.4 188 48.9
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 2.2e-37 159.5 172 54.1
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 2.2e-37 159.5 186 51.1
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 1.4e-36 156.8 184 48.9
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 1.9e-36 156.4 184 50.0
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 2.5e-36 156.0 186 50.5
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 3.2e-36 155.6 184 48.9
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 3.2e-36 155.6 170 50.6
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 5.5e-36 154.8 159 55.3
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 9.4e-36 154.1 187 49.7
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 1.2e-35 153.7 200 48.5
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 1.6e-35 153.3 194 48.5
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 1.6e-35 153.3 177 50.8
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 2.1e-35 152.9 181 51.9
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 2.1e-35 152.9 188 46.8
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 2.7e-35 152.5 191 47.6
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 2.7e-35 152.5 177 50.8
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 3.6e-35 152.1 177 50.8
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 3.6e-35 152.1 185 48.6
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 4.7e-35 151.8 177 52.0
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 6.1e-35 151.4 182 48.4
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 6.1e-35 151.4 180 49.4
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 6.1e-35 151.4 197 49.7
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 7.9e-35 151.0 184 51.6
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 7.9e-35 151.0 186 50.0
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 2.3e-34 149.4 183 51.9
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 2.3e-34 149.4 188 45.7
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 3.0e-34 149.1 174 50.0
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 5.1e-34 148.3 188 45.2
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 6.7e-34 147.9 175 48.6
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 6.7e-34 147.9 190 47.9
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 6.7e-34 147.9 196 47.4
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 8.8e-34 147.5 175 48.6
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 8.8e-34 147.5 203 47.3
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 1.5e-33 146.7 172 52.9
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 3.3e-33 145.6 186 47.8
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 3.3e-33 145.6 171 50.9
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 5.7e-33 144.8 205 47.3
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 9.7e-33 144.1 179 49.7
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 9.7e-33 144.1 176 47.2
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 1.3e-32 143.7 175 47.4
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 1.3e-32 143.7 175 47.4
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 1.3e-32 143.7 168 47.0
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 1.7e-32 143.3 172 47.7
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 2.8e-32 142.5 164 50.6
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 6.3e-32 141.4 172 47.1
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 8.2e-32 141.0 181 48.1
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 1.1e-31 140.6 181 47.5
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 1.1e-31 140.6 176 49.4
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.1e-31 140.6 180 47.2
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 1.1e-31 140.6 173 48.0
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 1.1e-31 140.6 175 48.0
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 1.4e-31 140.2 191 46.6
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 1.8e-31 139.8 165 49.1
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 1.8e-31 139.8 170 48.8
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 1.8e-31 139.8 171 48.5
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 1.8e-31 139.8 181 47.5
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 2.4e-31 139.4 159 50.9
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 2.4e-31 139.4 167 47.9
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 2.4e-31 139.4 182 46.7
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 3.1e-31 139.0 186 47.8
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 4.1e-31 138.7 167 47.9
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 4.1e-31 138.7 170 49.4
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 4.1e-31 138.7 195 45.1
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 5.3e-31 138.3 180 46.1
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 5.3e-31 138.3 174 49.4
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 9.1e-31 137.5 185 45.9
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 1.6e-30 136.7 178 47.2
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 2.0e-30 136.3 202 42.6
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 2.6e-30 136.0 185 44.9
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 2.6e-30 136.0 160 50.0
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 3.5e-30 135.6 181 46.4
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 3.5e-30 135.6 177 46.9
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 3.5e-30 135.6 153 52.9
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 7.7e-30 134.4 179 48.0
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 1.0e-29 134.0 173 45.1
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 1.3e-29 133.7 184 45.7
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 1.7e-29 133.3 189 45.5
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 1.7e-29 133.3 184 45.7
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 1.7e-29 133.3 198 43.4
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 6.5e-29 131.3 173 49.1
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 1.5e-28 130.2 170 47.6
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 3.2e-28 129.0 167 44.9
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 9.4e-28 127.5 181 43.6
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 1.2e-27 127.1 176 46.6
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 2.7e-27 125.9 184 44.0
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 2.7e-27 125.9 193 43.0
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 6.1e-27 124.8 169 45.0
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 6.1e-27 124.8 169 45.0
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 1.8e-26 123.2 221 39.4
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 5.2e-26 121.7 221 38.9
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 1.1e-25 120.6 149 47.7
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 2.0e-25 119.8 138 49.3
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 2.6e-25 119.4 163 44.2
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 8.2e-24 114.4 232 35.3
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 2.4e-23 112.8 164 42.1
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 4.1e-23 112.1 149 45.0
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 5.3e-23 111.7 175 42.9
CDE10G0174 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 7.0e-23 111.3 68 85.3
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.7e-22 109.4 102 56.9
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 5.0e-21 105.1 127 50.4
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 2.5e-20 102.8 147 40.8
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 3.6e-19 99.0 132 44.7
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 3.6e-19 99.0 140 45.0
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 2.3e-18 96.3 155 38.7
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 4.4e-17 92.0 163 37.4
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 1.8e-15 86.7 106 47.2
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 7.0e-15 84.7 177 33.3
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 2.0e-14 83.2 129 38.0
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.7e-13 80.1 155 37.4
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 1.7e-13 80.1 166 36.1
SEGI_13536 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 1.7e-13 80.1 81 56.8
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 3.0e-10 69.3 109 41.3
Gohir.1Z049409 Gossypium hirsutum HOM05D005391 ORTHO05D006694 4.0e-10 68.9 136 36.0
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.7e-08 62.4 66 50.0
Hund13632 Selenicereus undatus HOM05D005391 ORTHO05D006694 4.1e-07 58.9 142 31.7
CBR_g39765 Chara braunii HOM05D005391 ORTHO05D006694 1.2e-06 57.4 177 29.4


User provided reference genes

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