Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 0.0e+00 1090.9 562 100.0
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 3.9e-182 642.1 572 61.2
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 4.8e-180 635.2 567 61.0
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 4.5e-178 628.6 567 59.8
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.0e-177 627.5 569 59.6
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 5.0e-177 625.2 571 60.8
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 5.0e-177 625.2 570 58.4
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.9e-176 623.2 567 60.3
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 3.2e-176 622.5 568 60.6
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 5.5e-176 621.7 577 58.8
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 1.2e-175 620.5 564 59.6
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.6e-175 620.2 566 58.5
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 2.7e-175 619.4 567 59.1
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 6.1e-175 618.2 565 59.8
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 6.1e-175 618.2 568 60.4
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 1.4e-174 617.1 563 59.5
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.3e-174 616.3 564 59.4
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.0e-174 615.9 564 59.6
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 4.0e-174 615.5 567 58.9
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.7e-174 614.8 571 58.7
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 1.1e-173 614.0 573 58.3
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 2.0e-173 613.2 566 58.8
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 2.0e-173 613.2 567 57.1
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 2.6e-173 612.8 578 56.9
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 9.7e-173 610.9 564 58.9
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 2.2e-172 609.8 571 57.6
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 2.8e-172 609.4 564 58.9
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.7e-172 609.0 579 57.9
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 4.8e-172 608.6 568 58.1
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 4.8e-172 608.6 568 58.5
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 8.2e-172 607.8 579 57.7
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 8.2e-172 607.8 568 58.3
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.1e-171 607.4 571 59.2
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 1.8e-171 606.7 577 57.4
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 1.8e-171 606.7 566 57.4
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 4.1e-171 605.5 592 56.2
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 7.0e-171 604.7 566 57.4
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 7.0e-171 604.7 568 58.6
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 2.0e-170 603.2 567 57.7
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.0e-170 603.2 564 58.9
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 4.5e-170 602.1 568 57.9
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 5.9e-170 601.7 566 57.1
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 5.9e-170 601.7 563 57.9
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 7.7e-170 601.3 566 57.8
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 7.7e-170 601.3 562 57.5
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 1.3e-169 600.5 567 58.4
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 2.2e-169 599.7 573 58.1
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 2.2e-169 599.7 569 58.3
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 2.2e-169 599.7 564 57.1
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 5.0e-169 598.6 568 57.4
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 6.5e-169 598.2 576 58.0
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.1e-168 597.4 570 57.7
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 1.9e-168 596.7 563 58.1
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 4.2e-168 595.5 582 56.0
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 5.5e-168 595.1 576 56.6
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 1.6e-167 593.6 565 57.2
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 2.1e-167 593.2 566 56.7
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 3.6e-167 592.4 563 56.8
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 6.1e-167 591.7 563 56.3
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 1.0e-166 590.9 569 56.4
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 1.8e-166 590.1 573 57.8
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 3.0e-166 589.3 563 56.1
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 6.8e-166 588.2 567 56.6
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 8.8e-166 587.8 566 56.0
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.2e-165 587.4 565 56.1
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 1.5e-165 587.0 568 56.0
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 1.3e-164 583.9 562 56.0
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.7e-164 583.6 591 54.3
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 2.2e-164 583.2 568 56.2
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 3.7e-164 582.4 562 55.7
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 4.8e-164 582.0 564 55.5
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 6.3e-164 581.6 564 55.1
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 8.3e-164 581.3 566 54.9
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 2.4e-163 579.7 564 56.4
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 9.1e-163 577.8 639 52.1
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 9.1e-163 577.8 566 55.5
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 1.2e-162 577.4 565 54.9
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 2.7e-162 576.2 565 55.4
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.0e-161 574.3 584 56.8
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 2.2e-161 573.2 570 55.3
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 7.2e-160 568.2 562 55.0
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.3e-153 546.6 564 54.8
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 2.5e-152 543.1 562 52.8
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 2.5e-152 543.1 562 52.8
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 5.6e-152 542.0 567 52.6
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 5.6e-152 542.0 567 52.6
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 7.2e-152 541.6 562 52.7
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 1.8e-150 537.0 632 50.2
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 4.4e-149 532.3 534 55.1
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 2.9e-148 529.6 567 53.3
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 4.9e-148 528.9 526 55.7
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 4.3e-144 515.8 559 53.1
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 9.5e-144 514.6 525 54.3
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 3.0e-137 493.0 484 56.0
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 6.8e-134 481.9 486 53.9
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 1.7e-113 414.1 447 54.8
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 9.6e-112 408.3 412 53.6
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 5.8e-109 399.1 562 42.0
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 7.6e-109 398.7 584 40.9
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 4.8e-95 352.8 585 37.3
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 1.9e-91 340.9 595 36.1
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.8e-87 327.0 407 47.7
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 7.6e-85 318.9 559 36.9
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.9e-83 314.3 235 68.1
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 5.1e-81 306.2 223 65.0
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 3.8e-76 290.0 295 56.3
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 2.0e-72 277.7 291 59.8
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 5.5e-67 259.6 249 59.8
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 6.5e-60 236.1 242 51.2
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 8.5e-60 235.7 263 48.3
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 3.8e-52 210.3 376 38.6
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 3.0e-49 200.7 184 60.9
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 2.6e-48 197.6 587 27.6
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 2.1e-42 177.9 218 49.1
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 7.0e-30 136.3 151 57.0
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 3.6e-26 124.0 151 46.4
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.8e-17 93.2 71 56.3
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 2.3e-09 68.2 54 66.7
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 1.9e-06 58.5 39 69.2


User provided reference genes

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