Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0861 Ceratophyllum demersum HOM05D005306 ORTHO05D006158 5.0e-137 491.1 250 100.0
CDE10G0726 Ceratophyllum demersum HOM05D005306 ORTHO05D006158 8.3e-108 394.0 244 85.2
Dinv16302 Davidia involucrata HOM05D005306 ORTHO05D006158 3.4e-08 63.2 69 47.8
Actinidia36600 Actinidia chinensis HOM05D005306 ORTHO05D006158 1.3e-07 61.2 67 49.3
CANSAT01G2249 Cannabis sativa HOM05D005306 ORTHO05D006158 1.3e-07 61.2 64 50.0
VMungo0251G2777 Vigna mungo HOM05D005306 ORTHO05D006158 1.7e-07 60.8 78 44.9
MBI05_g34472_MAGBIO Magnolia biondii HOM05D005306 ORTHO05D006158 2.8e-07 60.1 326 25.2
Lalb_Chr13g0296051 Lupinus albus HOM05D005306 ORTHO05D006158 3.7e-07 59.7 44 59.1
CSS0034809 Camellia sinensis var. sinensis HOM05D005306 ORTHO05D006158 6.3e-07 58.9 69 46.4
PSO210G6319 Papaver somniferum HOM05D005306 ORTHO05D006158 8.3e-07 58.5 55 52.7
Ciclev10025982m.g Citrus clementina HOM05D005306 ORTHO05D006158 1.1e-06 58.2 291 26.5
TAR625G0717 Trochodendron aralioides HOM05D005306 ORTHO05D006158 1.1e-06 58.2 296 25.7
MSTRG.2558 Avicennia marina HOM05D005306 ORTHO05D006158 1.4e-06 57.8 65 44.6
Manes.12G136900 Manihot esculenta HOM05D005306 ORTHO05D006158 1.4e-06 57.8 75 42.7
Cpa.g.sc20.237 Carica papaya HOM05D005306 ORTHO05D006158 1.8e-06 57.4 70 45.7
AUR62002025 Chenopodium quinoa HOM05D005306 ORTHO05D006158 1.8e-06 57.4 61 47.5
ECA232G0837 Erigeron canadensis HOM05D005306 ORTHO05D006158 1.8e-06 57.4 52 53.8
Nitab4.5_0000104g0330 Nicotiana tabacum HOM05D005306 ORTHO05D006158 1.8e-06 57.4 71 43.7
vmacro12947 Vaccinium macrocarpon HOM05D005306 ORTHO05D006158 1.8e-06 57.4 62 48.4
Lj4A885T20 Lonicera japonica HOM05D005306 ORTHO05D006158 2.4e-06 57.0 278 28.1
PSO447G0179 Papaver somniferum HOM05D005306 ORTHO05D006158 2.4e-06 57.0 62 48.4
SalBow3G4455 Salvia bowleyana HOM05D005306 ORTHO05D006158 2.4e-06 57.0 74 45.9
A06p31940 Brassica napus HOM05D005306 ORTHO05D006158 3.1e-06 56.6 42 61.9
Os02g0752300 Oryza sativa ssp. japonica HOM05D005306 ORTHO05D006158 3.1e-06 56.6 69 42.0
CAN.G113.1 Capsicum annuum HOM05D005306 ORTHO05D006158 4.1e-06 56.2 228 24.6
Lsat_1_v5_gn_4_141700 Lactuca sativa HOM05D005306 ORTHO05D006158 4.1e-06 56.2 258 26.7
Solyc04g054900.3 Solanum lycopersicum HOM05D005306 ORTHO05D006158 4.1e-06 56.2 65 41.5
Sopen04g024710 Solanum pennellii HOM05D005306 ORTHO05D006158 4.1e-06 56.2 65 41.5
GSVIVG01004251001 Vitis vinifera HOM05D005306 ORTHO05D006158 4.1e-06 56.2 69 44.9
Ah.02g122180 Amaranthus hybridus HOM05D005306 ORTHO05D006158 5.4e-06 55.8 59 40.7
AL8G42620 Arabidopsis lyrata HOM05D005306 ORTHO05D006158 5.4e-06 55.8 48 56.2
arahy.Tifrunner.gnm1.ann1.H9PZRL Arachis hypogaea HOM05D005306 ORTHO05D006158 5.4e-06 55.8 58 53.4
arahy.Tifrunner.gnm1.ann1.U0X1YR Arachis hypogaea HOM05D005306 ORTHO05D006158 5.4e-06 55.8 58 53.4
Lj4g0005197 Lotus japonicus HOM05D005306 ORTHO05D006158 5.4e-06 55.8 37 70.3
unitig_27.g25362 Utricularia gibba HOM05D033148 ORTHO05D006158 5.4e-06 55.8 49 53.1
MELO3C007770.2 Cucumis melo HOM05D005306 ORTHO05D006158 7.0e-06 55.5 42 57.1
DCAR_014236 Daucus carota HOM05D005306 ORTHO05D006158 7.0e-06 55.5 292 27.4
Thhalv10004547m.g Eutrema salsugineum HOM05D005306 ORTHO05D006158 7.0e-06 55.5 42 59.5
Phvul.002G254400 Phaseolus vulgaris HOM05D005306 ORTHO05D006158 7.0e-06 55.5 93 37.6
Aa31LG1G16850 Aethionema arabicum HOM05D005306 ORTHO05D006158 9.2e-06 55.1 68 42.6
Medtr8g090365 Medicago truncatula HOM05D005306 ORTHO05D006158 9.2e-06 55.1 44 50.0


User provided reference genes

Program Settings