Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.8e-128 463.0 309 100.0
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 7.0e-64 248.4 301 59.8
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 5.9e-63 245.4 304 48.0
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.7e-62 243.8 301 65.1
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.2e-62 243.4 300 63.3
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.9e-62 243.0 304 47.4
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.9e-62 243.0 304 47.4
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.8e-62 242.7 303 47.9
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 5.0e-62 242.3 304 47.4
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 6.5e-62 241.9 303 47.9
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 1.2e-60 237.7 302 47.4
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 1.6e-60 237.3 306 57.5
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 1.6e-60 237.3 301 48.2
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 1.0e-59 234.6 301 45.2
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 1.8e-59 233.8 302 48.3
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 1.8e-59 233.8 301 47.5
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 3.0e-59 233.0 309 45.3
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 6.8e-59 231.9 301 45.8
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 6.8e-59 231.9 301 45.8
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 4.4e-58 229.2 309 46.3
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 9.8e-58 228.0 301 46.5
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 1.3e-57 227.6 301 44.9
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 1.3e-57 227.6 301 45.8
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 1.7e-57 227.3 305 49.8
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 2.8e-57 226.5 301 44.9
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 3.7e-57 226.1 305 49.2
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 6.3e-57 225.3 301 49.2
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 8.3e-57 224.9 301 45.5
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 2.4e-56 223.4 301 51.2
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.4e-56 223.4 301 45.8
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 2.4e-56 223.4 307 45.6
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.1e-56 223.0 301 46.2
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 3.1e-56 223.0 301 45.2
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 5.4e-56 222.2 311 45.3
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 7.0e-56 221.9 302 59.6
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 1.6e-55 220.7 303 59.1
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.6e-55 220.7 301 45.8
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 2.7e-55 219.9 301 43.5
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 3.5e-55 219.5 301 46.5
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 4.5e-55 219.2 301 46.2
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 5.9e-55 218.8 300 45.3
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 1.0e-54 218.0 305 44.6
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 1.0e-54 218.0 306 44.4
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 1.7e-54 217.2 300 47.3
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 2.2e-54 216.9 306 44.1
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 2.9e-54 216.5 300 46.3
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 3.8e-54 216.1 312 43.3
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 5.0e-54 215.7 338 41.7
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 6.5e-54 215.3 302 44.7
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 6.5e-54 215.3 306 43.8
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.1e-53 214.5 301 44.2
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.5e-53 214.2 300 48.0
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 2.5e-53 213.4 301 59.8
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.2e-53 213.0 302 50.7
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 4.2e-53 212.6 302 43.7
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 4.2e-53 212.6 301 45.8
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 7.2e-53 211.8 302 49.0
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 1.6e-52 210.7 308 42.2
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 2.1e-52 210.3 300 60.3
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.1e-52 210.3 304 60.5
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 3.6e-52 209.5 300 43.7
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 6.1e-52 208.8 314 42.7
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 8.0e-52 208.4 304 48.4
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 1.4e-51 207.6 315 41.6
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 3.0e-51 206.5 311 41.5
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 4.0e-51 206.1 308 46.4
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 6.8e-51 205.3 314 42.7
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 6.8e-51 205.3 314 42.7
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 6.8e-51 205.3 314 42.7
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 6.8e-51 205.3 314 42.7
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 6.8e-51 205.3 251 48.2
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 1.5e-50 204.1 315 42.2
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 1.5e-50 204.1 302 42.7
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 2.0e-50 203.8 314 42.0
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 3.4e-50 203.0 300 44.3
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 4.4e-50 202.6 315 41.3
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 7.5e-50 201.8 301 41.9
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 9.8e-50 201.4 314 42.4
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 9.8e-50 201.4 314 42.4
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 1.7e-49 200.7 316 41.5
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 2.2e-49 200.3 314 45.9
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 2.2e-49 200.3 317 41.3
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 4.9e-49 199.1 311 41.2
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 1.4e-48 197.6 317 40.7
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.1e-48 196.4 300 42.7
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 7.0e-48 195.3 310 41.3
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 9.2e-48 194.9 302 41.4
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 4.5e-47 192.6 310 43.5
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 1.0e-46 191.4 302 41.4
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 1.3e-46 191.0 302 43.4
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 2.9e-46 189.9 289 46.4
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 8.6e-46 188.3 300 40.7
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 6.1e-44 182.2 166 59.6
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 4.0e-43 179.5 169 57.4
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.4e-42 176.4 167 56.9
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 3.4e-42 176.4 267 41.2
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 5.7e-42 175.6 301 45.5
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 1.3e-41 174.5 259 41.3
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 1.4e-40 171.0 266 38.3
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.0e-39 167.2 306 57.8
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 4.3e-37 159.5 309 37.2
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.2e-34 151.4 167 48.5
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.6e-34 150.2 84 92.9
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 4.9e-33 146.0 136 58.1
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 8.3e-33 145.2 300 34.7
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 8.6e-30 135.2 280 35.7
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 1.1e-27 128.3 269 32.0
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 4.0e-27 126.3 126 52.4
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 5.2e-27 125.9 169 43.2
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 2.0e-26 124.0 122 56.6
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 2.2e-25 120.6 277 33.2
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.0e-22 111.7 122 51.6
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 3.0e-22 110.2 229 34.5
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 3.3e-21 106.7 172 36.0
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 3.3e-21 106.7 170 40.0
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 6.2e-20 102.4 113 51.3
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.4e-19 101.3 157 40.8
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 1.3e-17 94.7 190 41.6
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 2.9e-17 93.6 173 34.7
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.2e-16 90.1 166 37.3
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 1.2e-15 88.2 148 45.3
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.1e-15 87.4 166 36.1
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 1.9e-13 80.9 185 41.6
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 1.4e-11 74.7 74 59.5
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.1e-11 73.6 303 26.4
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.2e-10 71.6 81 49.4
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 2.2e-09 67.4 85 45.9
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 2.4e-08 63.9 48 60.4
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 1.2e-07 61.6 73 52.1
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 3.5e-07 60.1 67 53.7
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 4.6e-07 59.7 160 29.4
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 5.1e-06 56.2 76 47.4


User provided reference genes

Program Settings