Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 6.4e-59 230.3 100 100.0
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 4.3e-55 217.6 100 93.0
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 6.8e-45 183.7 98 78.6
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 1.2e-44 183.0 98 77.6
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 1.5e-44 182.6 98 77.6
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 2.6e-44 181.8 100 76.0
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 3.4e-44 181.4 98 77.6
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 7.5e-44 180.3 98 77.6
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 9.9e-44 179.9 98 76.5
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 9.9e-44 179.9 98 76.5
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 1.7e-43 179.1 100 76.0
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 2.2e-43 178.7 98 75.5
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 2.2e-43 178.7 98 76.5
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 3.7e-43 177.9 98 75.5
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 4.9e-43 177.6 98 75.5
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 4.9e-43 177.6 98 75.5
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 4.9e-43 177.6 98 75.5
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 1.9e-42 175.6 100 74.0
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 1.9e-42 175.6 98 75.5
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 1.9e-42 175.6 98 73.5
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 3.2e-42 174.9 100 74.0
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 3.2e-42 174.9 98 75.5
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 7.1e-42 173.7 98 75.5
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 3.5e-41 171.4 98 72.4
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 4.6e-41 171.0 98 70.4
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 7.8e-41 170.2 98 72.4
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 1.0e-40 169.9 98 71.4
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 1.7e-40 169.1 98 73.5
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 2.3e-40 168.7 98 71.4
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 2.3e-40 168.7 98 71.4
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 2.3e-40 168.7 98 71.4
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 2.3e-40 168.7 98 71.4
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 3.9e-40 167.9 98 73.5
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 5.1e-40 167.5 98 71.4
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 5.1e-40 167.5 98 72.4
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 8.6e-40 166.8 98 72.4
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 8.6e-40 166.8 98 72.4
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 1.1e-39 166.4 97 69.1
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 1.1e-39 166.4 100 69.0
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 1.9e-39 165.6 98 70.4
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 1.9e-39 165.6 98 68.4
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 2.5e-39 165.2 98 72.4
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 2.5e-39 165.2 98 70.4
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 2.5e-39 165.2 98 70.4
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 2.5e-39 165.2 98 69.4
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 4.3e-39 164.5 98 71.4
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 4.3e-39 164.5 98 73.5
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 4.3e-39 164.5 98 72.4
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 5.6e-39 164.1 98 73.5
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 5.6e-39 164.1 98 69.4
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 7.3e-39 163.7 98 73.5
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 7.3e-39 163.7 98 73.5
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 7.3e-39 163.7 98 70.4
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 1.2e-38 162.9 98 72.4
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 1.6e-38 162.5 98 69.4
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 2.1e-38 162.2 98 66.3
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 2.1e-38 162.2 95 71.6
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 2.8e-38 161.8 98 72.4
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 2.8e-38 161.8 98 72.4
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 2.8e-38 161.8 98 72.4
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 2.8e-38 161.8 98 72.4
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 2.8e-38 161.8 98 72.4
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 2.8e-38 161.8 98 72.4
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 3.6e-38 161.4 98 68.4
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 4.7e-38 161.0 98 69.4
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 1.1e-37 159.8 88 77.3
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 2.4e-37 158.7 98 70.4
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 3.1e-37 158.3 98 67.3
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 3.1e-37 158.3 98 69.4
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 8.9e-37 156.8 98 70.4
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 1.2e-36 156.4 83 78.3
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 3.4e-36 154.8 98 63.3
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 4.4e-36 154.5 98 67.3
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 5.8e-36 154.1 98 67.3
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 1.3e-35 152.9 98 64.3
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 4.9e-35 151.0 98 63.3
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 1.1e-34 149.8 100 64.0
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 1.1e-34 149.8 98 66.3
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 1.9e-34 149.1 98 62.2
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 4.6e-33 144.4 132 50.8
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 7.8e-33 143.7 99 60.6
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 5.1e-32 141.0 98 63.3
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 5.1e-32 141.0 98 63.3
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 2.5e-31 138.7 98 59.2
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 1.3e-30 136.3 98 58.2
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 2.1e-30 135.6 99 58.6
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 2.8e-30 135.2 98 59.2
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 2.8e-30 135.2 98 59.2
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 3.6e-30 134.8 86 68.6
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 3.4e-28 128.3 99 56.6
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 4.2e-26 121.3 168 39.9
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 9.3e-26 120.2 109 49.5
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 1.2e-25 119.8 99 52.5
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 4.6e-25 117.9 71 69.0
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 3.6e-22 108.2 99 48.5
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 9.9e-20 100.1 58 74.1
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 1.1e-18 96.7 100 44.0
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 1.8e-16 89.4 98 40.8
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 7.6e-12 73.9 37 83.8
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 8.4e-11 70.5 31 93.5
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 3.5e-09 65.1 46 58.7
Os03g0578200 Oryza sativa ssp. japonica HOM05D007373 ORTHO05D009192 5.1e-08 61.2 76 39.5
Zm00001eb061850 Zea mays HOM05D007373 ORTHO05D009192 6.7e-08 60.8 76 36.8
Zm00001eb212440 Zea mays HOM05D007373 ORTHO05D009192 7.4e-07 57.4 76 34.2


User provided reference genes

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