Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0775 Ceratophyllum demersum HOM05D006370 ORTHO05D008324 5.3e-90 334.3 170 100.0
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 3.6e-78 295.0 170 88.2
GSVIVG01022435001 Vitis vinifera HOM05D006370 ORTHO05D008324 3.7e-35 152.1 157 51.6
Hma1.2p1_0526F.1_g172840 Hydrangea macrophylla HOM05D006370 ORTHO05D008324 7.1e-34 147.9 153 53.6
Nn2g14550 Nelumbo nucifera HOM05D006370 ORTHO05D008324 2.1e-33 146.4 176 47.7
Lj1A1073T41 Lonicera japonica HOM05D006370 ORTHO05D008324 2.7e-33 146.0 156 52.6
TAR623G1163 Trochodendron aralioides HOM05D006370 ORTHO05D008324 1.3e-32 143.7 162 49.4
HanXRQChr01g0026941 Helianthus annuus HOM05D006370 ORTHO05D008324 1.7e-32 143.3 168 51.2
MSTRG.6248 Avicennia marina HOM05D006370 ORTHO05D008324 6.6e-32 141.4 171 48.0
vmacro07654 Vaccinium macrocarpon HOM05D006370 ORTHO05D008324 6.6e-32 141.4 151 51.7
PGR142G0714 Punica granatum HOM05D006370 ORTHO05D008324 8.6e-32 141.0 173 49.1
MD12G1010600 Malus domestica HOM05D006370 ORTHO05D008324 1.1e-31 140.6 156 50.6
Duzib177G0489 Durio zibethinus HOM05D006370 ORTHO05D008324 1.9e-31 139.8 162 48.1
Eucgr.K01528 Eucalyptus grandis HOM05D006370 ORTHO05D008324 1.9e-31 139.8 159 52.8
Cc10_g11540 Coffea canephora HOM05D006370 ORTHO05D008324 4.3e-31 138.7 175 44.6
Manes.09G136900 Manihot esculenta HOM05D006370 ORTHO05D008324 7.3e-31 137.9 157 51.6
EL10Ac5g11708 Beta vulgaris HOM05D006370 ORTHO05D008324 2.1e-30 136.3 170 47.1
TWI34G0169 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 2.8e-30 136.0 168 45.2
TWI60G1203 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 4.7e-30 135.2 172 45.3
PSO063G0933 Papaver somniferum HOM05D006370 ORTHO05D008324 6.2e-30 134.8 158 44.9
Atru.chr2.1510 Acer truncatum HOM05D006370 ORTHO05D008324 1.1e-29 134.0 172 45.3
Eucgr.K01533 Eucalyptus grandis HOM05D006370 ORTHO05D008324 1.1e-29 134.0 155 52.3
PSO339G2906 Papaver somniferum HOM05D006370 ORTHO05D008324 1.1e-29 134.0 158 45.6
Rhsim03G0049800 Rhododendron simsii HOM05D006370 ORTHO05D008324 1.4e-29 133.7 167 46.1
Sabra13G0056900 Salix brachista HOM05D006370 ORTHO05D008324 1.8e-29 133.3 161 45.3
Cfa017718 Carpinus fangiana HOM05D006370 ORTHO05D008324 2.3e-29 132.9 163 45.4
ECA248G1067 Erigeron canadensis HOM05D006370 ORTHO05D008324 2.3e-29 132.9 159 48.4
Duzib128G1808 Durio zibethinus HOM05D006370 ORTHO05D008324 5.2e-29 131.7 171 45.6
Sabra13G0057100 Salix brachista HOM05D006370 ORTHO05D008324 5.2e-29 131.7 161 44.7
Potri.013G065200 Populus trichocarpa HOM05D006370 ORTHO05D008324 6.8e-29 131.3 151 47.0
AUR62042155 Chenopodium quinoa HOM05D006370 ORTHO05D008324 1.2e-28 130.6 167 45.5
Ciclev10022640m.g Citrus clementina HOM05D006370 ORTHO05D008324 1.2e-28 130.6 159 47.2
Thecc.05G242700 Theobroma cacao HOM05D006370 ORTHO05D008324 1.5e-28 130.2 163 47.9
Gohir.A11G229500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 2.0e-28 129.8 160 45.0
SalBow6G1190 Salvia bowleyana HOM05D006370 ORTHO05D008324 2.0e-28 129.8 165 48.5
AUR62043361 Chenopodium quinoa HOM05D006370 ORTHO05D008324 4.4e-28 128.6 171 46.2
Migut.J01529 Erythranthe guttata HOM05D006370 ORTHO05D008324 4.4e-28 128.6 165 47.9
Gohir.D11G241500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 4.4e-28 128.6 160 43.8
COL.COLO4_28633 Corchorus olitorius HOM05D006370 ORTHO05D008324 5.8e-28 128.3 166 46.4
FAN26G3131 Fragaria x ananassa HOM05D006370 ORTHO05D008324 5.8e-28 128.3 148 48.0
arahy.Tifrunner.gnm1.ann1.AZ5GA5 Arachis hypogaea HOM05D006370 ORTHO05D008324 9.9e-28 127.5 160 45.0
arahy.Tifrunner.gnm1.ann1.ZL000T Arachis hypogaea HOM05D006370 ORTHO05D008324 9.9e-28 127.5 160 45.0
CiPaw.09G166900 Carya illinoinensis HOM05D006370 ORTHO05D008324 9.9e-28 127.5 159 47.2
MD14G1007700 Malus domestica HOM05D006370 ORTHO05D008324 9.9e-28 127.5 148 48.0
Gorai.007G255600 Gossypium raimondii HOM05D006370 ORTHO05D008324 1.7e-27 126.7 160 43.1
Zm00001eb057190 Zea mays HOM05D006370 ORTHO05D008324 1.7e-27 126.7 146 45.2
Os03g0748600 Oryza sativa ssp. japonica HOM05D006370 ORTHO05D008324 2.9e-27 125.9 144 45.1
CANSAT01G3230 Cannabis sativa HOM05D006370 ORTHO05D008324 4.9e-27 125.2 164 45.1
Cpa.g.sc161.33 Carica papaya HOM05D006370 ORTHO05D008324 4.9e-27 125.2 163 47.2
SGA_v2.0_scaffold69G23224 Striga asiatica HOM05D006370 ORTHO05D008324 8.4e-27 124.4 174 44.3
Glyma.19G010300 Glycine max HOM05D006370 ORTHO05D008324 1.1e-26 124.0 150 44.7
HPP92_022911 Vanilla planifolia HOM05D006370 ORTHO05D008324 1.4e-26 123.6 151 46.4
Aqoxy1G00517 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 2.4e-26 122.9 171 39.2
Glyma.13G170200 Glycine max HOM05D006370 ORTHO05D008324 3.2e-26 122.5 152 46.7
RcHm_v2.0_Chr3g0496161 Rosa chinensis HOM05D006370 ORTHO05D008324 3.2e-26 122.5 157 43.9
Lalb_Chr06g0174141 Lupinus albus HOM05D006370 ORTHO05D008324 1.2e-25 120.6 155 45.2
Aa31LG9G17570 Aethionema arabicum HOM05D006370 ORTHO05D008324 2.7e-25 119.4 160 43.8
FvH4_1g28570 Fragaria vesca HOM05D006370 ORTHO05D008324 2.7e-25 119.4 152 44.7
SEGI_24903 Sequoiadendron giganteum HOM05D006370 ORTHO05D008324 3.5e-25 119.0 158 45.6
Sp7g04690 Schrenkiella parvula HOM05D006370 ORTHO05D008324 2.3e-24 116.3 160 41.9
THA.LOC104823775 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 2.3e-24 116.3 169 42.6
FAN19G0680 Fragaria x ananassa HOM05D006370 ORTHO05D008324 3.0e-24 115.9 165 41.8
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 3.9e-24 115.5 82 64.6
Lsat_1_v5_gn_1_55401 Lactuca sativa HOM05D006370 ORTHO05D008324 3.9e-24 115.5 136 46.3
Dinv25046 Davidia involucrata HOM05D006370 ORTHO05D008324 8.6e-24 114.4 151 43.0
Thhalv10028111m.g Eutrema salsugineum HOM05D006370 ORTHO05D008324 8.6e-24 114.4 165 40.6
Nitab4.5_0000613g0010 Nicotiana tabacum HOM05D006370 ORTHO05D008324 8.6e-24 114.4 166 41.0
THA.LOC104800075 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 1.1e-23 114.0 175 40.6
Medtr6g027600 Medicago truncatula HOM05D006370 ORTHO05D008324 1.9e-23 113.2 160 41.2
THA.LOC104800403 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 1.9e-23 113.2 175 40.6
TAR633G0247 Trochodendron aralioides HOM05D001480 ORTHO05D001331 1.9e-23 113.2 82 63.4
BcaB06g27082 Brassica carinata HOM05D006370 ORTHO05D008324 2.5e-23 112.8 162 42.0
CARHR215460 Cardamine hirsuta HOM05D006370 ORTHO05D008324 3.3e-23 112.5 160 43.8
FAN28G0334 Fragaria x ananassa HOM05D006370 ORTHO05D008324 5.6e-23 111.7 165 40.6
unitig_744.g24144 Utricularia gibba HOM05D006370 ORTHO05D000703 7.3e-23 111.3 152 42.1
Sopen10g031990 Solanum pennellii HOM05D006370 ORTHO05D008324 1.2e-22 110.5 169 39.6
BcaC02g09577 Brassica carinata HOM05D006370 ORTHO05D008324 1.6e-22 110.2 169 40.2
BolC4t26007H Brassica oleracea HOM05D006370 ORTHO05D008324 1.6e-22 110.2 169 40.2
Psat1g089760 Pisum sativum HOM05D006370 ORTHO05D008324 1.6e-22 110.2 154 43.5
PGSC0003DMG400028217 Solanum tuberosum HOM05D006370 ORTHO05D008324 2.1e-22 109.8 169 39.1
A04p10640 Brassica napus HOM05D006370 ORTHO05D008324 2.8e-22 109.4 170 37.6
Solyc10g081480.2 Solanum lycopersicum HOM05D006370 ORTHO05D008324 2.8e-22 109.4 170 39.4
Actinidia37817 Actinidia chinensis HOM05D006370 ORTHO05D008324 3.6e-22 109.0 72 73.6
Carub.0007s3265 Capsella rubella HOM05D006370 ORTHO05D008324 3.6e-22 109.0 160 41.9
AT5G37480 Arabidopsis thaliana HOM05D006370 ORTHO05D008324 1.4e-21 107.1 151 40.4
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 3.1e-21 105.9 77 62.3
C04p44360 Brassica napus HOM05D006370 ORTHO05D008324 3.1e-21 105.9 173 39.3
Haze_20411 Corylus avellana HOM05D006370 ORTHO05D008324 8.9e-21 104.4 96 53.1
Prupe.7G012600 Prunus persica HOM05D006370 ORTHO05D008324 1.2e-20 104.0 79 62.0
Sc07g0007490 Simmondsia chinensis HOM05D006370 ORTHO05D008324 3.4e-20 102.4 134 44.0
Dinv05555 Davidia involucrata HOM05D006370 ORTHO05D008324 4.4e-20 102.1 95 54.7
Phvul.004G050600 Phaseolus vulgaris HOM05D006370 ORTHO05D008324 1.7e-19 100.1 90 56.7
VMungo0540G0157 Vigna mungo HOM05D006370 ORTHO05D008324 4.2e-18 95.5 73 61.6
SalBow4G2194 Salvia bowleyana HOM05D006370 ORTHO05D008324 3.9e-16 89.0 82 58.5
SalBow6G3000 Salvia bowleyana HOM05D006370 ORTHO05D008324 3.9e-16 89.0 82 58.5
SMO196G0263 Selaginella moellendorffii HOM05D006370 ORTHO05D008324 6.6e-16 88.2 166 36.7
Lj2g0006862 Lotus japonicus HOM05D006370 ORTHO05D008324 1.1e-13 80.9 90 52.2
Nitab4.5_0000387g0020 Nicotiana tabacum HOM05D006370 ORTHO05D008324 1.4e-13 80.5 86 50.0
SGA_v2.0_scaffold66G22394 Striga asiatica HOM05D006370 ORTHO05D008324 1.2e-12 77.4 165 37.0
BcaC05g29112 Brassica carinata HOM05D006370 ORTHO05D008324 2.0e-12 76.6 66 54.5
C05p53410 Brassica napus HOM05D006370 ORTHO05D008324 2.0e-12 76.6 66 54.5
BolC5t34010H Brassica oleracea HOM05D006370 ORTHO05D008324 7.6e-12 74.7 66 54.5
BolC5t34018H Brassica oleracea HOM05D006370 ORTHO05D008324 7.6e-12 74.7 66 54.5
Mapoly0066s0112 Marchantia polymorpha HOM05D006370 ORTHO05D008324 4.9e-11 72.0 90 42.2
Mapoly0007s0154 Marchantia polymorpha HOM05D006370 ORTHO05D008324 3.2e-10 69.3 181 32.0
Pp3c2_15250 Physcomitrium patens HOM05D006370 ORTHO05D008324 2.7e-09 66.2 182 28.6
Pp3c22_7490 Physcomitrium patens HOM05D006370 ORTHO05D008324 8.7e-08 61.2 62 46.8
Pp3c19_3200 Physcomitrium patens HOM05D006370 ORTHO05D008324 1.9e-07 60.1 91 37.4
Pp3c6_3990 Physcomitrium patens HOM05D001298 ORTHO05D001110 9.6e-07 57.8 79 40.5
SalBow5G3237 Salvia bowleyana HOM05D006370 ORTHO05D008324 3.7e-06 55.8 36 72.2


User provided reference genes

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