Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0746 Ceratophyllum demersum HOM05D007782 ORTHO05D009833 1.2e-29 132.5 67 100.0
CDE10G0352 Ceratophyllum demersum HOM05D007782 ORTHO05D009833 1.3e-28 129.0 67 97.0
Prupe.5G114300 Prunus persica HOM05D007782 ORTHO05D009833 4.5e-16 87.4 61 65.6
TAR636G2384 Trochodendron aralioides HOM05D007782 ORTHO05D009833 1.7e-15 85.5 66 62.1
FAN08G0568 Fragaria x ananassa HOM05D007782 ORTHO05D009833 2.4e-14 81.6 66 53.0
Manes.01G046100 Manihot esculenta HOM05D007782 ORTHO05D009833 2.4e-14 81.6 59 64.4
Aqoxy7G00161 Aquilegia oxysepala HOM05D007782 ORTHO05D009833 3.2e-14 81.3 57 70.2
Haze_08681 Corylus avellana HOM05D007782 ORTHO05D009833 3.2e-14 81.3 64 57.8
Lalb_Chr09g0332651 Lupinus albus HOM05D007782 ORTHO05D009833 3.2e-14 81.3 65 56.9
RcHm_v2.0_Chr7g0195561 Rosa chinensis HOM05D007782 ORTHO05D009833 3.2e-14 81.3 66 53.0
FAN04G1669 Fragaria x ananassa HOM05D007782 ORTHO05D009833 4.2e-14 80.9 66 51.5
Lalb_Chr05g0224281 Lupinus albus HOM05D007782 ORTHO05D009833 4.2e-14 80.9 60 61.7
MD06G1100800 Malus domestica HOM05D007782 ORTHO05D009833 4.2e-14 80.9 61 59.0
Dinv37557 Davidia involucrata HOM05D007782 ORTHO05D009833 5.5e-14 80.5 59 62.7
Lsat_1_v5_gn_6_11880 Lactuca sativa HOM05D007782 ORTHO05D009833 5.5e-14 80.5 61 60.7
QL02p031553 Quercus lobata HOM05D007782 ORTHO05D009833 7.1e-14 80.1 62 59.7
TPR.G3446 Trifolium pratense HOM05D007782 ORTHO05D009833 7.1e-14 80.1 67 59.7
GSVIVG01019488001 Vitis vinifera HOM05D007782 ORTHO05D009833 9.3e-14 79.7 59 61.0
Cfa012852 Carpinus fangiana HOM05D007782 ORTHO05D009833 1.2e-13 79.3 62 58.1
PSO135G0862 Papaver somniferum HOM05D007782 ORTHO05D009833 1.6e-13 79.0 46 80.4
Potri.003G136500 Populus trichocarpa HOM05D007782 ORTHO05D009833 1.6e-13 79.0 62 58.1
CARHR231160 Cardamine hirsuta HOM05D007782 ORTHO05D009833 2.1e-13 78.6 64 56.2
Ciclev10023213m.g Citrus clementina HOM05D007782 ORTHO05D009833 2.1e-13 78.6 66 57.6
HanXRQChr07g0191091 Helianthus annuus HOM05D007782 ORTHO05D009833 2.7e-13 78.2 51 66.7
DCAR_027723 Daucus carota HOM05D007782 ORTHO05D009833 3.5e-13 77.8 60 58.3
Hund14240 Selenicereus undatus HOM05D007782 ORTHO05D009833 3.5e-13 77.8 60 60.0
Carub.0007s1735 Capsella rubella HOM05D007782 ORTHO05D009833 4.6e-13 77.4 57 63.2
CiPaw.12G085400 Carya illinoinensis HOM05D007782 ORTHO05D009833 4.6e-13 77.4 63 55.6
COL.COLO4_21276 Corchorus olitorius HOM05D007782 ORTHO05D009833 4.6e-13 77.4 55 63.6
Migut.E01229 Erythranthe guttata HOM05D007782 ORTHO05D009833 4.6e-13 77.4 66 53.0
Sabra03G0098200 Salix brachista HOM05D007782 ORTHO05D009833 4.6e-13 77.4 63 55.6
ClCG01G002060 Citrullus lanatus HOM05D007782 ORTHO05D009833 6.0e-13 77.0 64 56.2
CsaV3_5G002190 Cucumis sativus L. HOM05D007782 ORTHO05D009833 6.0e-13 77.0 59 59.3
MBI06_g22402_MAGBIO Magnolia biondii HOM05D007782 ORTHO05D009833 6.0e-13 77.0 66 56.1
Thecc.03G292200 Theobroma cacao HOM05D007782 ORTHO05D009833 6.0e-13 77.0 60 60.0
Lj4g0009467 Lotus japonicus HOM05D007782 ORTHO05D009833 7.9e-13 76.6 66 56.1
Sed0001446 Sechium edule HOM05D007782 ORTHO05D009833 7.9e-13 76.6 47 74.5
Actinidia27340 Actinidia chinensis HOM05D007782 ORTHO05D009833 1.0e-12 76.3 57 64.9
Psat7g027800 Pisum sativum HOM05D007782 ORTHO05D009833 1.0e-12 76.3 67 56.7
Atru.chr9.2057 Acer truncatum HOM05D007782 ORTHO05D009833 1.3e-12 75.9 66 56.1
Aa31LG6G7000 Aethionema arabicum HOM05D007782 ORTHO05D009833 1.3e-12 75.9 58 58.6
MELO3C005735.2 Cucumis melo HOM05D007782 ORTHO05D009833 1.3e-12 75.9 59 57.6
SalBow8G2543 Salvia bowleyana HOM05D007782 ORTHO05D009833 1.3e-12 75.9 63 52.4
Peaxi162Scf00117g01316 Petunia axillaris HOM05D007782 ORTHO05D009833 1.8e-12 75.5 61 57.4
vmacro11447 Vaccinium macrocarpon HOM05D007782 ORTHO05D009833 1.8e-12 75.5 51 68.6
AT4G23760 Arabidopsis thaliana HOM05D007782 ORTHO05D009833 2.3e-12 75.1 58 58.6
Ca_17498_v3 Cicer arietinum L. HOM05D007782 ORTHO05D009833 2.3e-12 75.1 66 53.0
Cc08_g15700 Coffea canephora HOM05D007782 ORTHO05D009833 2.3e-12 75.1 62 53.2
Phvul.002G295900 Phaseolus vulgaris HOM05D007782 ORTHO05D009833 2.3e-12 75.1 66 54.5
AL7G29590 Arabidopsis lyrata HOM05D007782 ORTHO05D009833 5.1e-12 73.9 58 58.6
Thhalv10026535m.g Eutrema salsugineum HOM05D007782 ORTHO05D009833 5.1e-12 73.9 58 60.3
unitig_61.g26273 Utricularia gibba HOM05D007782 ORTHO05D009833 5.1e-12 73.9 66 53.0
AL6G45280 Arabidopsis lyrata HOM05D007782 ORTHO05D009833 8.7e-12 73.2 59 55.9
Thhalv10029109m.g Eutrema salsugineum HOM05D007782 ORTHO05D009833 8.7e-12 73.2 59 54.2
THA.LOC104814903 Tarenaya hassleriana HOM05D007782 ORTHO05D009833 8.7e-12 73.2 65 53.8
arahy.Tifrunner.gnm1.ann1.UB6WN3 Arachis hypogaea HOM05D007782 ORTHO05D009833 1.1e-11 72.8 64 53.1
arahy.Tifrunner.gnm1.ann1.WVD97E Arachis hypogaea HOM05D007782 ORTHO05D009833 1.1e-11 72.8 64 53.1
Nn1g01795 Nelumbo nucifera HOM05D007782 ORTHO05D009833 1.1e-11 72.8 63 52.4
A03p54750 Brassica napus HOM05D007782 ORTHO05D009833 1.5e-11 72.4 65 52.3
BraA03t14542Z Brassica rapa HOM05D007782 ORTHO05D009833 1.5e-11 72.4 65 52.3
Glyma.08G021000 Glycine max HOM05D007782 ORTHO05D009833 1.9e-11 72.0 66 51.5
Sp6g06300 Schrenkiella parvula HOM05D007782 ORTHO05D009833 1.9e-11 72.0 59 54.2
Eucgr.E00835 Eucalyptus grandis HOM05D007782 ORTHO05D009833 2.5e-11 71.6 57 61.4
Sp7g21730 Schrenkiella parvula HOM05D007782 ORTHO05D009833 4.3e-11 70.9 57 57.9
CARHR255470 Cardamine hirsuta HOM05D007782 ORTHO05D009833 9.6e-11 69.7 57 56.1
PGSC0003DMG400004987 Solanum tuberosum HOM05D007782 ORTHO05D009833 9.6e-11 69.7 58 55.2
BcaNung05927 Brassica carinata HOM05D007782 ORTHO05D009833 1.3e-10 69.3 57 54.4
Glyma.05G214700 Glycine max HOM05D007782 ORTHO05D009833 2.1e-10 68.6 55 60.0
C07p53110 Brassica napus HOM05D007782 ORTHO05D009833 4.8e-10 67.4 57 52.6
BolC7t45807H Brassica oleracea HOM05D007782 ORTHO05D009833 4.8e-10 67.4 57 52.6
Solyc12g056090.2 Solanum lycopersicum HOM05D007782 ORTHO05D009833 6.2e-10 67.0 58 51.7
Os01g0224300 Oryza sativa ssp. japonica HOM05D007782 ORTHO05D009833 8.2e-10 66.6 50 58.0
Sopen12g028600 Solanum pennellii HOM05D007782 ORTHO05D009833 8.2e-10 66.6 46 60.9
FAN18G3918 Fragaria x ananassa HOM05D007782 ORTHO05D009833 1.1e-09 66.2 52 55.8
Nitab4.5_0002788g0030 Nicotiana tabacum HOM05D007782 ORTHO05D009833 1.1e-09 66.2 46 63.0
CAN.G2065.2 Capsicum annuum HOM05D007782 ORTHO05D009833 1.5e-08 62.4 61 44.3
Rhsim02G0240700 Rhododendron simsii HOM05D007782 ORTHO05D009833 7.6e-08 60.1 47 61.7
Medtr8g099240 Medicago truncatula HOM05D007782 ORTHO05D009833 2.2e-07 58.5 46 58.7
CAN.G98.14 Capsicum annuum HOM05D007782 ORTHO05D009833 2.9e-07 58.2 60 41.7
TWI81G1055 Tripterygium wilfordii HOM05D007782 ORTHO05D009833 4.9e-07 57.4 45 55.6
AagrBONN_evm.TU.Sc2ySwM_362.1714 Anthoceros agrestis HOM05D007782 ORTHO05D009833 1.1e-06 56.2 45 55.6
BcaNung03194 Brassica carinata HOM05D007782 ORTHO05D009833 1.1e-06 56.2 75 40.0
Potri.001G094750 Populus trichocarpa HOM05D007782 ORTHO05D009833 1.1e-06 56.2 55 52.7
ATR1093G039 Amborella trichopoda HOM05D007782 ORTHO05D009833 2.5e-06 55.1 52 42.3
Duzib084G1198 Durio zibethinus HOM05D007782 ORTHO05D009833 4.2e-06 54.3 47 53.2


User provided reference genes

Program Settings