Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0745 Ceratophyllum demersum HOM05D004847 ORTHO05D005856 1.8e-79 299.3 158 100.0
CDE10G0883 Ceratophyllum demersum HOM05D004847 ORTHO05D005856 1.4e-55 219.9 123 97.6
CDE10G0375 Ceratophyllum demersum HOM05D004847 ORTHO05D005856 7.2e-41 171.0 100 93.0
TAR633G0229 Trochodendron aralioides HOM05D004847 ORTHO05D005856 1.5e-33 146.7 160 55.6
Glyma.10G154100 Glycine max HOM05D004847 ORTHO05D005856 4.3e-33 145.2 157 54.8
MBI19_g05601_MAGBIO Magnolia biondii HOM05D004847 ORTHO05D005856 5.6e-33 144.8 158 53.2
TAR362G0189 Trochodendron aralioides HOM05D004847 ORTHO05D005856 5.6e-33 144.8 157 56.1
Phvul.007G179800 Phaseolus vulgaris HOM05D004847 ORTHO05D005856 7.3e-33 144.4 157 54.8
QL03p006978 Quercus lobata HOM05D004847 ORTHO05D005856 9.5e-33 144.1 156 58.3
Glyma.20G234200 Glycine max HOM05D004847 ORTHO05D005856 1.2e-32 143.7 157 54.8
Manes.09G166900 Manihot esculenta HOM05D004847 ORTHO05D005856 1.2e-32 143.7 157 55.4
VMungo0720G3140 Vigna mungo HOM05D004847 ORTHO05D005856 1.2e-32 143.7 157 54.8
CANSAT54G0893 Cannabis sativa HOM05D004847 ORTHO05D005856 4.7e-32 141.7 157 56.1
Nitab4.5_0003156g0010 Nicotiana tabacum HOM05D004847 ORTHO05D005856 6.1e-32 141.4 101 73.3
Nitab4.5_0000137g0030 Nicotiana tabacum HOM05D004847 ORTHO05D005856 8.0e-32 141.0 101 73.3
Peaxi162Scf00037g00632 Petunia axillaris HOM05D004847 ORTHO05D005856 1.0e-31 140.6 102 71.6
MD04G1205400 Malus domestica HOM05D004847 ORTHO05D005856 1.4e-31 140.2 157 54.8
Prupe.6G326100 Prunus persica HOM05D004847 ORTHO05D005856 3.0e-31 139.0 156 55.8
CSS0017838 Camellia sinensis var. sinensis HOM05D004847 ORTHO05D005856 4.0e-31 138.7 157 56.1
COL.COLO4_13475 Corchorus olitorius HOM05D004847 ORTHO05D005856 4.0e-31 138.7 157 54.8
Duzib106G0633 Durio zibethinus HOM05D004847 ORTHO05D005856 4.0e-31 138.7 161 54.0
Nn4g26247 Nelumbo nucifera HOM05D004847 ORTHO05D005856 4.0e-31 138.7 157 54.1
GSVIVG01000048001 Vitis vinifera HOM05D004847 ORTHO05D005856 5.2e-31 138.3 161 53.4
Atru.chr2.410 Acer truncatum HOM05D004847 ORTHO05D005856 1.5e-30 136.7 159 54.1
arahy.Tifrunner.gnm1.ann1.91A0PW Arachis hypogaea HOM05D004847 ORTHO05D005856 1.5e-30 136.7 158 53.2
FAN05G5436 Fragaria x ananassa HOM05D004847 ORTHO05D005856 1.5e-30 136.7 163 52.8
FAN05G5722 Fragaria x ananassa HOM05D004847 ORTHO05D005856 1.5e-30 136.7 163 52.8
MD12G1219500 Malus domestica HOM05D004847 ORTHO05D005856 1.5e-30 136.7 156 55.1
Psat0s3135g0240 Pisum sativum HOM05D004847 ORTHO05D005856 1.5e-30 136.7 104 69.2
PGSC0003DMG401024742 Solanum tuberosum HOM05D004847 ORTHO05D005856 1.5e-30 136.7 101 71.3
FvH4_6g05820 Fragaria vesca HOM05D004847 ORTHO05D005856 3.4e-30 135.6 163 52.8
FAN14G3900 Fragaria x ananassa HOM05D004847 ORTHO05D005856 3.4e-30 135.6 163 52.8
Solyc01g099270.2 Solanum lycopersicum HOM05D004847 ORTHO05D005856 3.4e-30 135.6 101 70.3
Sopen01g042820 Solanum pennellii HOM05D004847 ORTHO05D005856 3.4e-30 135.6 101 70.3
THA.LOC104818696 Tarenaya hassleriana HOM05D004847 ORTHO05D005856 3.4e-30 135.6 162 50.6
CiPaw.08G164900 Carya illinoinensis HOM05D004847 ORTHO05D005856 4.4e-30 135.2 158 55.7
Actinidia24643 Actinidia chinensis HOM05D004847 ORTHO05D005856 7.5e-30 134.4 156 53.8
arahy.Tifrunner.gnm1.ann1.WTPV8B Arachis hypogaea HOM05D004847 ORTHO05D005856 7.5e-30 134.4 158 52.5
CAN.G1034.25 Capsicum annuum HOM05D004847 ORTHO05D005856 7.5e-30 134.4 103 70.9
Gohir.D11G275000 Gossypium hirsutum HOM05D004847 ORTHO05D005856 9.8e-30 134.0 157 52.2
Gorai.007G296800 Gossypium raimondii HOM05D004847 ORTHO05D005856 9.8e-30 134.0 157 52.2
Thecc.05G303800 Theobroma cacao HOM05D004847 ORTHO05D005856 9.8e-30 134.0 157 54.1
CSS0010861 Camellia sinensis var. sinensis HOM05D004847 ORTHO05D005856 1.3e-29 133.7 102 68.6
Eucgr.L01544 Eucalyptus grandis HOM05D004847 ORTHO05D005856 1.3e-29 133.7 157 54.1
PSO832G1768 Papaver somniferum HOM05D004847 ORTHO05D005856 1.3e-29 133.7 161 53.4
TWI56G1294 Tripterygium wilfordii HOM05D004847 ORTHO05D005856 1.3e-29 133.7 159 51.6
Ca_10113_v3 Cicer arietinum L. HOM05D004847 ORTHO05D005856 2.9e-29 132.5 103 69.9
Potri.005G033200 Populus trichocarpa HOM05D004847 ORTHO05D005856 3.7e-29 132.1 102 70.6
Potri.013G022600 Populus trichocarpa HOM05D004847 ORTHO05D005856 3.7e-29 132.1 157 53.5
MELO3C004268.2 Cucumis melo HOM05D004847 ORTHO05D005856 4.9e-29 131.7 107 66.4
Gohir.A11G264800 Gossypium hirsutum HOM05D004847 ORTHO05D005856 4.9e-29 131.7 157 51.6
Gohir.D08G227600 Gossypium hirsutum HOM05D004847 ORTHO05D005856 4.9e-29 131.7 155 52.9
Gorai.004G241800 Gossypium raimondii HOM05D004847 ORTHO05D005856 4.9e-29 131.7 155 52.9
RcHm_v2.0_Chr3g0454731 Rosa chinensis HOM05D004847 ORTHO05D005856 8.3e-29 131.0 163 51.5
Lalb_Chr04g0260731 Lupinus albus HOM05D004847 ORTHO05D005856 1.1e-28 130.6 123 60.2
Sabra05G0035400 Salix brachista HOM05D004847 ORTHO05D005856 1.1e-28 130.6 154 53.2
Aqoxy5G00505 Aquilegia oxysepala HOM05D004847 ORTHO05D005856 1.8e-28 129.8 155 51.0
Thhalv10020613m.g Eutrema salsugineum HOM05D004847 ORTHO05D005856 1.8e-28 129.8 106 63.2
Sed0004129 Sechium edule HOM05D004847 ORTHO05D005856 1.8e-28 129.8 166 50.6
Carub.0003s0461 Capsella rubella HOM05D004847 ORTHO05D005856 2.4e-28 129.4 106 63.2
Duzib128G0091 Durio zibethinus HOM05D004847 ORTHO05D005856 2.4e-28 129.4 157 52.2
Lj5A533T17 Lonicera japonica HOM05D004847 ORTHO05D005856 2.4e-28 129.4 157 50.3
TWI12G0805 Tripterygium wilfordii HOM05D004847 ORTHO05D005856 3.2e-28 129.0 158 50.0
AL3G15780 Arabidopsis lyrata HOM05D004847 ORTHO05D005856 4.1e-28 128.6 106 63.2
Medtr7g113510 Medicago truncatula HOM05D004847 ORTHO05D005856 4.1e-28 128.6 158 51.3
BcaC05g30136 Brassica carinata HOM05D004847 ORTHO05D005856 5.4e-28 128.3 106 62.3
Cc11_g03560 Coffea canephora HOM05D004847 ORTHO05D005856 5.4e-28 128.3 105 63.8
CsaV3_2G005250 Cucumis sativus L. HOM05D004847 ORTHO05D005856 5.4e-28 128.3 106 67.0
PSO210G5284 Papaver somniferum HOM05D004847 ORTHO05D005856 5.4e-28 128.3 161 52.2
Sc16g0008460 Simmondsia chinensis HOM05D004847 ORTHO05D005856 5.4e-28 128.3 104 66.3
TPR.G6113 Trifolium pratense HOM05D006420 ORTHO05D008009 5.4e-28 128.3 162 51.9
BcaC05g30154 Brassica carinata HOM05D004847 ORTHO05D005856 7.0e-28 127.9 106 62.3
Sp3g04200 Schrenkiella parvula HOM05D004847 ORTHO05D005856 7.0e-28 127.9 159 47.2
AT3G05330 Arabidopsis thaliana HOM05D004847 ORTHO05D005856 9.2e-28 127.5 159 47.8
Glyma.19G235300 Glycine max HOM05D004847 ORTHO05D005856 1.2e-27 127.1 161 51.6
Gohir.A08G210800 Gossypium hirsutum HOM05D004847 ORTHO05D005856 1.2e-27 127.1 157 51.0
BNapus_Darmor_BZH_scaffold_114p00170 Brassica napus HOM05D004847 ORTHO05D005856 2.0e-27 126.3 106 62.3
BraSC132t45510Z Brassica rapa HOM05D004847 ORTHO05D005856 2.0e-27 126.3 106 62.3
Dinv23942 Davidia involucrata HOM05D004847 ORTHO05D005856 2.7e-27 125.9 157 51.6
BolC1t05700H Brassica oleracea HOM05D004847 ORTHO05D005856 3.5e-27 125.6 159 47.8
TPR.G33190 Trifolium pratense HOM05D004847 ORTHO05D005856 3.5e-27 125.6 105 65.7
CARHR079680 Cardamine hirsuta HOM05D004847 ORTHO05D005856 4.6e-27 125.2 106 60.4
A05p42290 Brassica napus HOM05D004847 ORTHO05D005856 5.9e-27 124.8 106 60.4
C05p61870 Brassica napus HOM05D004847 ORTHO05D005856 5.9e-27 124.8 160 46.9
BolC5t34847H Brassica oleracea HOM05D004847 ORTHO05D005856 5.9e-27 124.8 160 46.9
BraA05t23024Z Brassica rapa HOM05D004847 ORTHO05D005856 5.9e-27 124.8 106 60.4
Migut.B01038 Erythranthe guttata HOM05D004847 ORTHO05D005856 5.9e-27 124.8 107 65.4
CiPaw.07G017600 Carya illinoinensis HOM05D004847 ORTHO05D005856 7.8e-27 124.4 98 71.4
DCAR_003332 Daucus carota HOM05D004847 ORTHO05D005856 2.3e-26 122.9 98 65.3
Sabra13G0024700 Salix brachista HOM05D004847 ORTHO05D005856 3.0e-26 122.5 103 67.0
Aa31LG5G15720 Aethionema arabicum HOM05D000141 ORTHO05D001311 3.9e-26 122.1 153 47.1
AUR62000830 Chenopodium quinoa HOM05D004847 ORTHO05D005856 3.9e-26 122.1 155 47.7
AUR62005144 Chenopodium quinoa HOM05D004847 ORTHO05D005856 8.6e-26 120.9 99 64.6
Lsat_1_v5_gn_9_123520 Lactuca sativa HOM05D004847 ORTHO05D005856 1.1e-25 120.6 156 48.7
ATR0626G214 Amborella trichopoda HOM05D004847 ORTHO05D005856 1.9e-25 119.8 99 63.6
Medtr1g082940 Medicago truncatula HOM05D004847 ORTHO05D005856 2.5e-25 119.4 98 68.4
vmacro19624 Vaccinium macrocarpon HOM05D004847 ORTHO05D005856 3.3e-25 119.0 161 50.3
Hund07068 Selenicereus undatus HOM05D004847 ORTHO05D005856 4.3e-25 118.6 158 47.5
Ah.06g189340 Amaranthus hybridus HOM05D004847 ORTHO05D005856 7.3e-25 117.9 155 46.5
SalBow3G4161 Salvia bowleyana HOM05D004847 ORTHO05D005856 9.5e-25 117.5 102 62.7
PGR083G0144 Punica granatum HOM05D004847 ORTHO05D005856 1.2e-24 117.1 157 51.0
DCAR_029413 Daucus carota HOM05D004847 ORTHO05D005856 6.2e-24 114.8 103 59.2
EL10Ac4g09352 Beta vulgaris HOM05D004847 ORTHO05D005856 2.3e-23 112.8 99 63.6
Haze_04198 Corylus avellana HOM05D004847 ORTHO05D005856 3.1e-23 112.5 155 49.7
ECA240G3864 Erigeron canadensis HOM05D004847 ORTHO05D005856 5.2e-23 111.7 103 61.2
Glyma.03G237700 Glycine max HOM05D004847 ORTHO05D005856 8.9e-23 110.9 101 65.3
MSTRG.27999 Avicennia marina HOM05D004847 ORTHO05D005856 1.5e-22 110.2 162 43.2
ClCG02G015810 Citrullus lanatus HOM05D000141 ORTHO05D001311 1.3e-21 107.1 90 65.6
Hma1.2p1_0928F.1_g237810 Hydrangea macrophylla HOM05D004847 ORTHO05D005856 1.3e-21 107.1 156 49.4
HPP92_003277 Vanilla planifolia HOM05D004847 ORTHO05D005856 1.7e-21 106.7 159 44.7
Lj5g0019148 Lotus japonicus HOM05D004847 ORTHO05D005856 3.7e-21 105.5 93 68.8
Phvul.006G091600 Phaseolus vulgaris HOM05D004847 ORTHO05D005856 4.9e-21 105.1 106 59.4
Ciclev10003680m.g Citrus clementina HOM05D004847 ORTHO05D001311 6.4e-21 104.8 159 47.2
Zm00001eb286860 Zea mays HOM05D004847 ORTHO05D005856 1.2e-19 100.5 199 42.2
Migut.N02003 Erythranthe guttata HOM05D004847 ORTHO05D005856 1.6e-19 100.1 99 57.6
Migut.O00711 Erythranthe guttata HOM05D004847 ORTHO05D005856 5.0e-18 95.1 155 40.6
HanXRQChr09g0248411 Helianthus annuus HOM05D004847 ORTHO05D005856 1.5e-17 93.6 157 41.4
Gohir.D12G153350 Gossypium hirsutum HOM05D004847 ORTHO05D005856 1.9e-17 93.2 67 67.2
Gorai.004G124500 Gossypium raimondii HOM05D004847 ORTHO05D005856 5.6e-17 91.7 72 61.1
VMungo0540G0069 Vigna mungo HOM05D004847 ORTHO05D005856 1.2e-16 90.5 102 54.9
SGA_v2.0_scaffold80G25911 Striga asiatica HOM05D004847 ORTHO05D005856 3.6e-16 89.0 105 53.3
MD00G1120700 Malus domestica HOM05D004847 ORTHO05D005856 1.1e-15 87.4 67 61.2
MD02G1275700 Malus domestica HOM05D004847 ORTHO05D005856 1.4e-15 87.0 67 59.7
Ca_09354_v3 Cicer arietinum L. HOM05D004847 ORTHO05D005856 1.8e-15 86.7 77 59.7
Cpa.g.sc48.49 Carica papaya HOM05D004847 ORTHO05D005856 6.8e-15 84.7 104 49.0
SEGI_00809 Sequoiadendron giganteum HOM05D004847 ORTHO05D005856 1.2e-14 84.0 121 44.6
Oeu017487.1 Olea europaea HOM05D004847 ORTHO05D005856 1.5e-14 83.6 97 56.7
Lalb_Chr02g0148231 Lupinus albus HOM05D004847 ORTHO05D005856 2.6e-14 82.8 158 40.5
Gohir.D08G115550 Gossypium hirsutum HOM05D004847 ORTHO05D005856 1.7e-13 80.1 59 62.7
Manes.08G120800 Manihot esculenta HOM05D004847 ORTHO05D005856 1.7e-13 80.1 99 50.5
GSVIVG01000050001 Vitis vinifera HOM05D000141 ORTHO05D001311 1.9e-12 76.6 102 47.1
SGA_v2.0_scaffold81G26072 Striga asiatica HOM05D004847 ORTHO05D005856 5.4e-12 75.1 102 49.0
Actinidia19789 Actinidia chinensis HOM05D004847 ORTHO05D005856 8.6e-10 67.8 66 60.6
Rhsim05G0141800 Rhododendron simsii HOM05D004847 ORTHO05D005856 2.5e-09 66.2 156 37.8
Actinidia28666 Actinidia chinensis HOM05D004847 ORTHO05D005856 4.3e-09 65.5 60 63.3
Psat3g073720 Pisum sativum HOM05D004847 ORTHO05D005856 4.7e-08 62.0 60 58.3
SEGI_03169 Sequoiadendron giganteum HOM05D004847 ORTHO05D005856 1.5e-06 57.0 122 41.0


User provided reference genes

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