Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0721 Ceratophyllum demersum HOM05D003602 ORTHO05D004808 0.0e+00 1215.3 621 100.0
CDE10G0625 Ceratophyllum demersum HOM05D003602 ORTHO05D004808 1.9e-246 855.9 571 81.4
Nn1g00272 Nelumbo nucifera HOM05D003602 ORTHO05D004808 5.8e-243 844.3 657 65.8
Duzib133G0673 Durio zibethinus HOM05D003602 ORTHO05D004808 1.7e-234 816.2 643 63.5
Gohir.A07G137000 Gossypium hirsutum HOM05D003602 ORTHO05D004808 1.2e-232 810.1 643 63.1
Gorai.001G154000 Gossypium raimondii HOM05D003602 ORTHO05D004808 6.0e-232 807.7 643 63.1
Gohir.D07G142200 Gossypium hirsutum HOM05D003602 ORTHO05D004808 3.0e-231 805.4 643 63.0
Duzib138G1559 Durio zibethinus HOM05D003602 ORTHO05D004808 1.5e-230 803.1 656 61.6
Actinidia17298 Actinidia chinensis HOM05D003602 ORTHO05D004808 1.9e-230 802.7 632 63.9
Dinv34217 Davidia involucrata HOM05D003602 ORTHO05D004808 3.3e-230 802.0 632 64.4
vmacro07844 Vaccinium macrocarpon HOM05D003602 ORTHO05D004808 5.6e-230 801.2 632 63.9
Thecc.01G340800 Theobroma cacao HOM05D003602 ORTHO05D004808 7.3e-230 800.8 642 62.6
CSS0032390 Camellia sinensis var. sinensis HOM05D003602 ORTHO05D004808 2.1e-229 799.3 632 64.4
Lj7P499T29 Lonicera japonica HOM05D003602 ORTHO05D004808 4.7e-229 798.1 657 62.7
THA.LOC104817368 Tarenaya hassleriana HOM05D003602 ORTHO05D004808 1.8e-228 796.2 632 63.3
Hma1.2p1_0390F.1_g142640 Hydrangea macrophylla HOM05D003602 ORTHO05D004808 3.1e-228 795.4 632 63.6
Aqoxy7G00067 Aquilegia oxysepala HOM05D003602 ORTHO05D004808 6.9e-228 794.3 658 61.6
ATR0605G321 Amborella trichopoda HOM05D003602 ORTHO05D004808 1.2e-227 793.5 656 62.3
CANSAT56G2221 Cannabis sativa HOM05D003602 ORTHO05D004808 1.5e-227 793.1 631 63.2
COL.COLO4_06273 Corchorus olitorius HOM05D003602 ORTHO05D004808 3.8e-226 788.5 644 62.4
ClCG05G000750 Citrullus lanatus HOM05D003602 ORTHO05D004808 6.4e-226 787.7 632 63.1
arahy.Tifrunner.gnm1.ann1.M38EY0 Arachis hypogaea HOM05D003602 ORTHO05D004808 8.4e-226 787.3 632 62.7
Sed0022447 Sechium edule HOM05D003602 ORTHO05D004808 1.4e-225 786.6 632 63.4
arahy.Tifrunner.gnm1.ann1.100NT6 Arachis hypogaea HOM05D003602 ORTHO05D004808 2.1e-224 782.7 632 62.2
Manes.05G021800 Manihot esculenta HOM05D003602 ORTHO05D004808 7.8e-224 780.8 656 60.1
PGSC0003DMG401000117 Solanum tuberosum HOM05D003602 ORTHO05D004808 1.0e-223 780.4 632 62.2
Manes.01G245400 Manihot esculenta HOM05D003602 ORTHO05D004808 1.3e-223 780.0 656 60.4
Nitab4.5_0001763g0060 Nicotiana tabacum HOM05D003602 ORTHO05D004808 1.3e-223 780.0 632 62.3
Sed0018077 Sechium edule HOM05D003602 ORTHO05D004808 1.7e-223 779.6 632 62.8
Rhsim03G0025100 Rhododendron simsii HOM05D003602 ORTHO05D004808 2.3e-223 779.2 632 61.6
Solyc01g096060.4 Solanum lycopersicum HOM05D003602 ORTHO05D004808 3.0e-223 778.9 632 62.2
CSS0048042 Camellia sinensis var. sinensis HOM05D003602 ORTHO05D004808 5.1e-223 778.1 639 62.1
CsaV3_3G007970 Cucumis sativus L. HOM05D003602 ORTHO05D004808 5.1e-223 778.1 632 62.3
CAN.G1415.23 Capsicum annuum HOM05D003602 ORTHO05D004808 8.7e-223 777.3 632 62.0
CiPaw.01G077200 Carya illinoinensis HOM05D003602 ORTHO05D004808 1.1e-222 776.9 632 61.6
MELO3C006015.2 Cucumis melo HOM05D003602 ORTHO05D004808 1.1e-222 776.9 632 62.2
Sopen01g039780 Solanum pennellii HOM05D003602 ORTHO05D004808 1.1e-222 776.9 632 62.0
Nitab4.5_0002614g0030 Nicotiana tabacum HOM05D003602 ORTHO05D004808 3.3e-222 775.4 632 61.9
QL08p045638 Quercus lobata HOM05D003602 ORTHO05D004808 2.1e-221 772.7 635 62.4
Lalb_Chr04g0254381 Lupinus albus HOM05D003602 ORTHO05D004808 8.1e-221 770.8 632 61.2
Peaxi162Scf00345g00023 Petunia axillaris HOM05D003602 ORTHO05D004808 1.8e-220 769.6 632 61.6
TWI59G0599 Tripterygium wilfordii HOM05D003602 ORTHO05D004808 1.8e-220 769.6 656 59.8
Cfa003788 Carpinus fangiana HOM05D003602 ORTHO05D004808 5.3e-220 768.1 632 61.4
Ciclev10018709m.g Citrus clementina HOM05D003602 ORTHO05D004808 6.9e-220 767.7 643 60.3
Migut.N01537 Erythranthe guttata HOM05D003602 ORTHO05D004808 6.9e-220 767.7 649 60.4
Potri.014G100000 Populus trichocarpa HOM05D003602 ORTHO05D004808 9.0e-220 767.3 632 61.9
Glyma.16G023700 Glycine max HOM05D003602 ORTHO05D004808 1.5e-219 766.5 632 60.8
Lalb_Chr17g0342751 Lupinus albus HOM05D003602 ORTHO05D004808 1.5e-219 766.5 632 60.6
TPR.G20226 Trifolium pratense HOM05D003602 ORTHO05D004808 2.0e-219 766.1 632 61.2
Sabra14G0073400 Salix brachista HOM05D003602 ORTHO05D004808 2.6e-219 765.8 632 61.7
Potri.002G172700 Populus trichocarpa HOM05D003602 ORTHO05D004808 4.5e-219 765.0 656 59.8
PGR042G2389 Punica granatum HOM05D003602 ORTHO05D004808 4.5e-219 765.0 634 62.5
Eucgr.D02383 Eucalyptus grandis HOM05D003602 ORTHO05D004808 5.8e-219 764.6 632 60.8
Prupe.2G190300 Prunus persica HOM05D003602 ORTHO05D004808 1.3e-218 763.5 656 58.4
DCAR_008665 Daucus carota HOM05D003602 ORTHO05D004808 1.7e-218 763.1 632 61.9
Haze_15672 Corylus avellana HOM05D003602 ORTHO05D004808 3.8e-218 761.9 632 60.9
Glyma.07G054900 Glycine max HOM05D003602 ORTHO05D004808 6.4e-218 761.1 632 60.3
RcHm_v2.0_Chr1g0360031 Rosa chinensis HOM05D003602 ORTHO05D004808 1.1e-217 760.4 656 58.5
Sabra02G0140500 Salix brachista HOM05D003602 ORTHO05D004808 3.2e-217 758.8 656 59.5
VMungo0540G0473 Vigna mungo HOM05D003602 ORTHO05D004808 3.2e-217 758.8 632 60.6
MD01G1083100 Malus domestica HOM05D003602 ORTHO05D004808 9.3e-217 757.3 656 58.4
SEGI_02600 Sequoiadendron giganteum HOM05D003602 ORTHO05D004808 1.2e-216 756.9 629 60.4
VMungo0540G0209 Vigna mungo HOM05D003602 ORTHO05D004808 1.2e-216 756.9 632 60.8
Oeu043228.1 Olea europaea HOM05D003602 ORTHO05D004808 1.0e-215 753.8 632 60.6
MSTRG.17352 Avicennia marina HOM05D003602 ORTHO05D004808 1.3e-215 753.4 632 59.8
Medtr8g027450 Medicago truncatula HOM05D003602 ORTHO05D004808 2.3e-215 752.7 656 58.5
PSO135G0828 Papaver somniferum HOM05D003602 ORTHO05D004808 2.3e-215 752.7 633 59.1
Thhalv10001293m.g Eutrema salsugineum HOM05D003602 ORTHO05D004808 3.0e-215 752.3 643 58.5
Carub.0004s2923 Capsella rubella HOM05D003602 ORTHO05D004808 3.9e-215 751.9 657 57.2
AL4G45940 Arabidopsis lyrata HOM05D003602 ORTHO05D004808 1.1e-214 750.4 657 57.4
PSO384G3294 Papaver somniferum HOM05D003602 ORTHO05D004808 1.9e-214 749.6 633 58.8
CARHR141850 Cardamine hirsuta HOM05D003602 ORTHO05D004808 2.5e-214 749.2 643 58.5
FvH4_7g16830 Fragaria vesca HOM05D003602 ORTHO05D004808 2.5e-214 749.2 657 58.4
Lj3g0012795 Lotus japonicus HOM05D003602 ORTHO05D004808 5.6e-214 748.0 638 59.9
Sp4g28560 Schrenkiella parvula HOM05D003602 ORTHO05D004808 9.6e-214 747.3 643 58.6
FAN06G4341 Fragaria x ananassa HOM05D003602 ORTHO05D004808 1.6e-213 746.5 657 58.3
FAN10G3025 Fragaria x ananassa HOM05D003602 ORTHO05D004808 2.1e-213 746.1 657 58.1
FAN01G1925 Fragaria x ananassa HOM05D003602 ORTHO05D004808 3.7e-213 745.3 657 58.0
Phvul.006G114200 Phaseolus vulgaris HOM05D003602 ORTHO05D004808 4.8e-213 745.0 632 59.7
FAN03G2718 Fragaria x ananassa HOM05D003602 ORTHO05D004808 6.2e-213 744.6 657 58.0
FAN06G1715 Fragaria x ananassa HOM05D003602 ORTHO05D004808 8.1e-213 744.2 657 58.1
FAN10G2704 Fragaria x ananassa HOM05D003602 ORTHO05D004808 1.1e-212 743.8 657 58.0
AT2G46520 Arabidopsis thaliana HOM05D003602 ORTHO05D004808 2.4e-212 742.7 644 57.6
Phvul.006G114111 Phaseolus vulgaris HOM05D003602 ORTHO05D004808 2.4e-212 742.7 632 59.2
QL11p045606 Quercus lobata HOM05D003602 ORTHO05D004808 2.4e-212 742.7 679 57.6
A05p01280 Brassica napus HOM05D003602 ORTHO05D004808 2.0e-211 739.6 643 58.5
BraA05t19126Z Brassica rapa HOM05D003602 ORTHO05D004808 2.0e-211 739.6 643 58.5
SGA_v2.0_scaffold22G09976 Striga asiatica HOM05D003602 ORTHO05D004808 2.6e-211 739.2 632 59.3
SGA_v2.0_scaffold22G09979 Striga asiatica HOM05D003602 ORTHO05D004808 4.5e-211 738.4 632 59.0
TAR375G0067 Trochodendron aralioides HOM05D003602 ORTHO05D004808 4.5e-211 738.4 498 73.9
Cc02_g39500 Coffea canephora HOM05D003602 ORTHO05D004808 5.8e-211 738.0 632 59.7
Aqoxy4G00207 Aquilegia oxysepala HOM05D003602 ORTHO05D004808 7.6e-211 737.6 663 57.6
HanXRQChr04g0120491 Helianthus annuus HOM05D003602 ORTHO05D004808 1.1e-209 733.8 652 57.7
Lsat_1_v5_gn_7_961 Lactuca sativa HOM05D003602 ORTHO05D004808 2.7e-208 729.2 636 59.1
Oeu007881.3 Olea europaea HOM05D003602 ORTHO05D004808 5.6e-206 721.5 704 54.4
ECA236G0047 Erigeron canadensis HOM05D003602 ORTHO05D004808 1.5e-203 713.4 632 58.1
Ca_23524_v3 Cicer arietinum L. HOM05D003602 ORTHO05D004808 3.4e-203 712.2 631 57.7
unitig_736.g22809 Utricularia gibba HOM05D003602 ORTHO05D004808 8.4e-202 707.6 632 56.8
Actinidia39220 Actinidia chinensis HOM05D003602 ORTHO05D004808 1.6e-200 703.4 632 58.9
HPP92_002938 Vanilla planifolia HOM05D003602 ORTHO05D004808 1.6e-200 703.4 668 55.8
Migut.B01885 Erythranthe guttata HOM05D003602 ORTHO05D004808 8.7e-199 697.6 501 66.3
Aa31LG1G27870 Aethionema arabicum HOM05D003602 ORTHO05D004808 1.5e-198 696.8 643 56.5
SalBow2G0371 Salvia bowleyana HOM05D003602 ORTHO05D004808 4.8e-197 691.8 635 57.2
Sc02g0002440 Simmondsia chinensis HOM05D003602 ORTHO05D004808 9.0e-196 687.6 657 53.6
Sc02g0002490 Simmondsia chinensis HOM05D003602 ORTHO05D004808 9.0e-196 687.6 657 53.6
Dinv32601 Davidia involucrata HOM05D003602 ORTHO05D004808 1.2e-195 687.2 632 58.2
C04p01410 Brassica napus HOM05D003602 ORTHO05D004808 2.2e-194 682.9 643 55.1
BolC4t21795H Brassica oleracea HOM05D003602 ORTHO05D004808 2.9e-194 682.6 643 55.1
BcaC02g12682 Brassica carinata HOM05D003602 ORTHO05D004808 4.2e-193 678.7 621 56.7
Hund27357 Selenicereus undatus HOM05D003602 ORTHO05D004808 2.7e-192 676.0 651 52.8
Mapoly0156s0024 Marchantia polymorpha HOM05D003602 ORTHO05D004808 6.7e-191 671.4 629 55.2
AUR62020311 Chenopodium quinoa HOM05D003602 ORTHO05D004808 6.9e-188 661.4 652 51.5
EL10Ac6g13271 Beta vulgaris HOM05D003602 ORTHO05D004808 9.4e-185 651.0 648 51.1
Ah.03g136880 Amaranthus hybridus HOM05D003602 ORTHO05D004808 1.0e-183 647.5 648 50.8
Ah.14g081150 Amaranthus hybridus HOM05D003602 ORTHO05D004808 1.4e-183 647.1 648 50.9
Pp3c16_3270 Physcomitrium patens HOM05D003602 ORTHO05D004808 3.3e-182 642.5 629 52.6
Pp3c27_3380 Physcomitrium patens HOM05D003602 ORTHO05D004808 1.2e-179 634.0 629 52.1
CARHR195690 Cardamine hirsuta HOM05D003602 ORTHO05D004808 4.7e-176 622.1 547 57.2
SHI11330 Sapria himalayana HOM05D003602 ORTHO05D004808 6.7e-175 618.2 641 49.6
Carub.0001s3638 Capsella rubella HOM05D003602 ORTHO05D004808 1.5e-174 617.1 641 51.2
Zm00001eb055080 Zea mays HOM05D003602 ORTHO05D004808 7.7e-171 604.7 633 49.6
TAR371G1016 Trochodendron aralioides HOM05D003602 ORTHO05D004808 2.2e-170 603.2 481 63.6
EL10Ac8g18571 Beta vulgaris HOM05D003602 ORTHO05D004808 8.5e-170 601.3 654 48.3
CARHR193560 Cardamine hirsuta HOM05D003602 ORTHO05D004808 7.2e-169 598.2 657 48.9
Zm00001eb216140 Zea mays HOM05D003602 ORTHO05D004808 3.0e-167 592.8 625 49.8
SMO364G0669 Selaginella moellendorffii HOM05D003602 ORTHO05D004808 2.6e-166 589.7 633 47.9
BcaC03g13954 Brassica carinata HOM05D003602 ORTHO05D004808 3.7e-165 585.9 648 48.9
A02p08760 Brassica napus HOM05D003602 ORTHO05D004808 1.9e-161 573.5 641 49.0
BraA02t05946Z Brassica rapa HOM05D003602 ORTHO05D004808 3.7e-157 559.3 642 48.3
AagrBONN_evm.TU.Sc2ySwM_228.4084 Anthoceros agrestis HOM05D003602 ORTHO05D004808 6.3e-157 558.5 454 61.2
Medtr6g051660 Medicago truncatula HOM05D003602 ORTHO05D004808 1.2e-155 554.3 465 60.2
CBR_g50023 Chara braunii HOM05D003602 ORTHO05D004808 2.9e-154 549.7 653 45.2
Psat4g162200 Pisum sativum HOM05D003602 ORTHO05D004808 2.5e-153 546.6 407 66.8
GSVIVG01027164001 Vitis vinifera HOM05D003602 ORTHO05D004808 2.3e-151 540.0 351 74.1
AagrBONN_evm.TU.Sc2ySwM_368.664__665 Anthoceros agrestis HOM05D003602 ORTHO05D004808 2.9e-146 523.1 463 57.7
MD07G1151800 Malus domestica HOM05D003602 ORTHO05D004808 1.9e-145 520.4 389 64.5
TPR.G33518 Trifolium pratense HOM05D003602 ORTHO05D004808 2.4e-132 476.9 600 46.2
SMO358G0230 Selaginella moellendorffii HOM05D003602 ORTHO05D004808 4.1e-132 476.1 627 42.6
MCO04G210 Micromonas commoda HOM05D003602 ORTHO05D004808 1.1e-129 468.0 518 45.4
FAN17G1261 Fragaria x ananassa HOM05D003602 ORTHO05D004808 9.2e-124 448.4 508 48.6
Cre16.g685901 Chlamydomonas reinhardtii HOM05D003602 ORTHO05D004808 1.3e-122 444.5 521 43.4
PRCOL_00001712 Prasinoderma coloniale HOM05D003602 ORTHO05D004808 1.8e-119 434.1 517 43.9
AUR62011778 Chenopodium quinoa HOM05D003602 ORTHO05D004808 5.2e-119 432.6 577 43.0
Os01g0235400 Oryza sativa ssp. japonica HOM05D003602 ORTHO05D004808 2.5e-105 387.1 457 46.0
Thhalv10019782m.g Eutrema salsugineum HOM05D003602 ORTHO05D004808 1.1e-103 381.7 496 44.6
SalBow3G0266 Salvia bowleyana HOM05D003602 ORTHO05D004808 1.3e-88 331.6 342 50.0
Lsat_1_v5_gn_2_68180 Lactuca sativa HOM05D003602 ORTHO05D004808 7.9e-83 312.4 251 62.5
QL06p027270 Quercus lobata HOM05D004207 ORTHO05D005188 2.5e-81 307.4 214 70.1
QL04p077689 Quercus lobata HOM05D003602 ORTHO05D002925 8.5e-69 265.8 206 62.6
Lj9C388G20 Lonicera japonica HOM05D003602 ORTHO05D004808 1.9e-68 264.6 193 67.4
Cfa023442 Carpinus fangiana HOM05D003602 ORTHO05D004808 2.5e-68 264.2 527 30.4
QL10p039122 Quercus lobata HOM05D003602 ORTHO05D004808 1.7e-61 241.5 180 63.9
Cpa.g.sc18.79 Carica papaya HOM05D003602 ORTHO05D004808 3.8e-61 240.4 246 54.1
BolC2t07237H Brassica oleracea HOM05D003602 ORTHO05D004808 1.0e-58 232.3 277 46.6
BcaB03g13365 Brassica carinata HOM05D003602 ORTHO05D004808 1.4e-58 231.9 430 37.2
ECA240G0654 Erigeron canadensis HOM05D003602 ORTHO05D004808 4.4e-57 226.9 285 50.2
BcaC03g15021 Brassica carinata HOM05D003602 ORTHO05D018547 4.1e-55 220.3 521 33.6
Psat4g156360 Pisum sativum HOM05D003602 ORTHO05D004808 1.2e-54 218.8 218 51.8
QL02p042411 Quercus lobata HOM05D002707 ORTHO05D002925 5.2e-50 203.4 194 54.6
BolC2t07236H Brassica oleracea HOM05D003602 ORTHO05D004808 9.8e-49 199.1 196 52.0
Lj9A388T38 Lonicera japonica HOM05D003602 ORTHO05D004808 1.2e-38 165.6 141 61.0
QL05p088277 Quercus lobata HOM05D003602 ORTHO05D007458 1.2e-35 155.6 143 56.6
Prupe.2G190900 Prunus persica HOM05D003602 ORTHO05D004808 3.4e-33 147.5 221 38.9
AagrBONN_evm.TU.Sc2ySwM_368.663 Anthoceros agrestis HOM05D003602 ORTHO05D004808 4.9e-32 143.7 132 56.1
BolC2t08632H Brassica oleracea HOM05D003602 ORTHO05D004808 1.1e-28 132.5 244 36.1
AL350U10020 Arabidopsis lyrata HOM05D003602 ORTHO05D004808 2.8e-27 127.9 437 25.2
Dinv07459 Davidia involucrata HOM05D003602 ORTHO05D004808 3.1e-18 97.8 88 53.4
Lsat_1_v5_gn_2_108301 Lactuca sativa HOM05D003602 ORTHO05D004808 1.2e-17 95.9 204 34.3
Oeu004956.1 Olea europaea HOM05D003602 ORTHO05D004808 1.3e-16 92.4 275 29.8
Psat0s1548g0040 Pisum sativum HOM05D000278 ORTHO05D015036 2.9e-16 91.3 65 61.5
CAN.G1045.28 Capsicum annuum HOM05D003602 ORTHO05D004808 9.2e-15 86.3 159 37.7
SEGI_28185 Sequoiadendron giganteum HOM05D000644 ORTHO05D000504 2.8e-11 74.7 172 30.2
Lsat_1_v5_gn_2_118340 Lactuca sativa HOM05D003602 ORTHO05D004808 3.1e-10 71.2 84 46.4
FAN22G1715 Fragaria x ananassa HOM05D003602 ORTHO05D020334 9.9e-09 66.2 63 55.6
FAN17G1901 Fragaria x ananassa HOM05D003602 ORTHO05D020334 3.7e-08 64.3 68 52.9
FAN12G2779 Fragaria x ananassa HOM05D003602 ORTHO05D004808 2.7e-06 58.2 63 46.0


User provided reference genes

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