Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0717 Ceratophyllum demersum HOM05D000141 ORTHO05D004993 0.0e+00 1572.0 861 100.0
CDE10G0963 Ceratophyllum demersum HOM05D000141 ORTHO05D004993 0.0e+00 1391.7 862 89.6
MBI02_g32604_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004993 0.0e+00 1100.9 874 71.5
TAR376G1001 Trochodendron aralioides HOM05D000141 ORTHO05D004993 0.0e+00 1076.2 866 70.1
Aqoxy6G01438 Aquilegia oxysepala HOM05D000141 ORTHO05D004993 0.0e+00 1075.8 866 68.6
vmacro13004 Vaccinium macrocarpon HOM05D000141 ORTHO05D004993 9.9e-310 1066.6 865 68.2
PSO675G5554 Papaver somniferum HOM05D000141 ORTHO05D004993 2.9e-309 1065.1 864 67.8
TWI77G1015 Tripterygium wilfordii HOM05D000141 ORTHO05D004993 1.0e-306 1056.6 866 67.9
PSO541G3987 Papaver somniferum HOM05D000141 ORTHO05D004993 1.1e-305 1053.1 866 67.2
Atru.chr3.1257 Acer truncatum HOM05D000141 ORTHO05D004993 3.3e-305 1051.6 871 66.9
Thecc.01G091400 Theobroma cacao HOM05D000141 ORTHO05D004993 1.3e-304 1049.7 865 68.9
Ciclev10024724m.g Citrus clementina HOM05D000141 ORTHO05D004993 2.8e-304 1048.5 870 66.9
Potri.007G010700 Populus trichocarpa HOM05D000141 ORTHO05D004993 3.7e-304 1048.1 865 66.6
Eucgr.I00545 Eucalyptus grandis HOM05D000141 ORTHO05D004993 6.2e-304 1047.3 864 68.4
Hund14088 Selenicereus undatus HOM05D000141 ORTHO05D004993 1.4e-303 1046.2 869 68.5
TWI74G0717 Tripterygium wilfordii HOM05D000141 ORTHO05D004993 4.0e-303 1044.6 862 67.3
COL.COLO4_27349 Corchorus olitorius HOM05D000141 ORTHO05D004993 4.5e-302 1041.2 866 66.7
CiPaw.07G048100 Carya illinoinensis HOM05D000141 ORTHO05D004993 2.9e-301 1038.5 875 66.5
Prupe.6G198800 Prunus persica HOM05D000141 ORTHO05D004993 1.4e-300 1036.2 867 66.1
Gorai.007G233100 Gossypium raimondii HOM05D000141 ORTHO05D004993 3.2e-300 1035.0 864 68.6
Gohir.A11G206600 Gossypium hirsutum HOM05D000141 ORTHO05D004993 5.5e-300 1034.2 864 68.8
Cpa.g.sc55.32 Carica papaya HOM05D000141 ORTHO05D004993 1.0e-298 1030.0 866 68.4
FvH4_1g19720 Fragaria vesca HOM05D000141 ORTHO05D004993 1.0e-298 1030.0 866 66.2
FAN26G1575 Fragaria x ananassa HOM05D000141 ORTHO05D004993 2.3e-298 1028.9 866 66.1
ATR0665G420 Amborella trichopoda HOM05D000141 ORTHO05D004993 3.0e-298 1028.5 867 66.4
CANSAT54G0158 Cannabis sativa HOM05D000141 ORTHO05D004993 6.7e-298 1027.3 865 67.4
Rhsim10G0172400 Rhododendron simsii HOM05D000141 ORTHO05D004993 1.1e-297 1026.5 918 64.5
FAN28G0107 Fragaria x ananassa HOM05D000141 ORTHO05D004993 2.5e-297 1025.4 866 66.1
EL10Ac6g15211 Beta vulgaris HOM05D000141 ORTHO05D004993 4.3e-297 1024.6 868 65.8
FAN19G2112 Fragaria x ananassa HOM05D000141 ORTHO05D004993 4.3e-297 1024.6 866 66.1
Manes.12G126900 Manihot esculenta HOM05D000141 ORTHO05D004993 4.3e-297 1024.6 870 65.4
RcHm_v2.0_Chr2g0111301 Rosa chinensis HOM05D000141 ORTHO05D004993 4.3e-297 1024.6 863 66.0
AUR62003657 Chenopodium quinoa HOM05D000141 ORTHO05D004993 7.4e-297 1023.8 869 65.2
Duzib147G0545 Durio zibethinus HOM05D000141 ORTHO05D004993 2.8e-296 1021.9 865 67.2
MD00G1019700 Malus domestica HOM05D000141 ORTHO05D004993 3.7e-296 1021.5 868 65.9
Cfa006890 Carpinus fangiana HOM05D000141 ORTHO05D004993 6.2e-296 1020.8 869 66.3
VMungo0251G3517 Vigna mungo HOM05D000141 ORTHO05D004993 1.8e-295 1019.2 865 64.7
Phvul.003G289200 Phaseolus vulgaris HOM05D000141 ORTHO05D004993 5.3e-295 1017.7 869 66.5
Sabra07G0008100 Salix brachista HOM05D000141 ORTHO05D004993 6.9e-295 1017.3 949 61.4
arahy.Tifrunner.gnm1.ann1.029WE6 Arachis hypogaea HOM05D000141 ORTHO05D004993 1.0e-293 1013.4 860 65.0
arahy.Tifrunner.gnm1.ann1.46GERB Arachis hypogaea HOM05D000141 ORTHO05D004993 2.9e-293 1011.9 860 64.9
Glyma.18G146600 Glycine max HOM05D000141 ORTHO05D004993 3.8e-293 1011.5 867 65.9
PGR031G3531 Punica granatum HOM05D000141 ORTHO05D004993 3.8e-293 1011.5 862 65.8
TPR.G14602 Trifolium pratense HOM05D000141 ORTHO05D004993 3.8e-293 1011.5 868 64.5
Migut.K00793 Erythranthe guttata HOM05D000141 ORTHO05D004993 8.4e-293 1010.4 869 64.7
Peaxi162Scf00778g00009 Petunia axillaris HOM05D000141 ORTHO05D004993 3.5e-291 1005.0 866 66.9
Medtr8g471180 Medicago truncatula HOM05D000141 ORTHO05D004993 4.6e-291 1004.6 875 63.8
Sc16g0000540 Simmondsia chinensis HOM05D006593 ORTHO05D004993 1.8e-290 1002.7 854 66.2
Ca_22599_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004993 5.1e-290 1001.1 872 63.9
MSTRG.15690 Avicennia marina HOM05D000141 ORTHO05D004993 2.5e-289 998.8 868 64.5
Glyma.08G279800 Glycine max HOM05D000141 ORTHO05D004993 4.8e-288 994.6 867 63.7
Lj4g0027101 Lotus japonicus HOM05D000141 ORTHO05D004993 6.3e-288 994.2 866 63.7
Actinidia25312 Actinidia chinensis HOM05D000141 ORTHO05D004993 1.1e-287 993.4 863 65.1
Glyma.01G023600 Glycine max HOM05D000141 ORTHO05D004993 1.4e-287 993.0 867 63.7
CsaV3_6G045040 Cucumis sativus L. HOM05D000141 ORTHO05D004993 2.4e-287 992.3 867 66.1
Glyma.02G041400 Glycine max HOM05D000141 ORTHO05D004993 4.1e-287 991.5 867 63.7
ClCG01G018390 Citrullus lanatus HOM05D000141 ORTHO05D004993 1.2e-286 989.9 867 65.6
Zm00001eb372980 Zea mays HOM05D000141 ORTHO05D004993 2.0e-286 989.2 868 63.8
MELO3C007717.2 Cucumis melo HOM05D000141 ORTHO05D004993 2.6e-286 988.8 868 66.1
Dinv13609 Davidia involucrata HOM05D000141 ORTHO05D004993 2.6e-286 988.8 866 64.2
Sed0001145 Sechium edule HOM05D000141 ORTHO05D004993 7.7e-286 987.3 867 65.7
AUR62017965 Chenopodium quinoa HOM05D000141 ORTHO05D004993 2.9e-285 985.3 868 63.4
Phvul.002G147700 Phaseolus vulgaris HOM05D000141 ORTHO05D004993 3.8e-285 984.9 863 63.5
AL8G43040 Arabidopsis lyrata HOM05D000141 ORTHO05D004993 8.5e-285 983.8 864 64.2
Lalb_Chr05g0228501 Lupinus albus HOM05D000141 ORTHO05D004993 1.1e-284 983.4 866 62.9
Sopen11g005360 Solanum pennellii HOM05D000141 ORTHO05D004993 9.4e-284 980.3 867 65.4
Carub.0008s2631 Capsella rubella HOM05D000141 ORTHO05D004993 4.6e-283 978.0 866 63.4
AT5G65460 Arabidopsis thaliana HOM05D000141 ORTHO05D004993 7.9e-283 977.2 864 64.4
C03p60620 Brassica napus HOM05D000141 ORTHO05D004993 1.8e-282 976.1 865 63.4
Sp2g28540 Schrenkiella parvula HOM05D000141 ORTHO05D004993 1.8e-282 976.1 868 63.8
Solyc11g010560.3 Solanum lycopersicum HOM05D000141 ORTHO05D004993 3.0e-282 975.3 867 65.1
BraA06t26155Z Brassica rapa HOM05D000141 ORTHO05D004993 2.5e-281 972.2 865 63.2
SalBow5G1291 Salvia bowleyana HOM05D000141 ORTHO05D004993 4.3e-281 971.5 900 61.4
A06p32290 Brassica napus HOM05D000141 ORTHO05D004993 5.7e-281 971.1 865 63.2
BolC3t18317H Brassica oleracea HOM05D000141 ORTHO05D004993 2.8e-280 968.8 865 63.1
Lalb_Chr05g0216301 Lupinus albus HOM05D000141 ORTHO05D004993 2.8e-280 968.8 868 62.1
Aa31LG1G16550 Aethionema arabicum HOM05D000141 ORTHO05D004993 1.4e-279 966.5 864 63.7
AL6G20990 Arabidopsis lyrata HOM05D000141 ORTHO05D004993 1.8e-279 966.1 864 62.7
Carub.0006s0895 Capsella rubella HOM05D000141 ORTHO05D004993 6.9e-279 964.1 858 63.2
BcaB01g05532 Brassica carinata HOM05D000141 ORTHO05D004993 2.2e-277 959.1 858 62.2
C03p05120 Brassica napus HOM05D000141 ORTHO05D004993 2.9e-277 958.7 855 62.1
AT5G10470 Arabidopsis thaliana HOM05D000141 ORTHO05D004993 3.8e-277 958.4 864 62.2
BraA03t09798Z Brassica rapa HOM05D000141 ORTHO05D004993 1.1e-276 956.8 855 62.0
A03p04560 Brassica napus HOM05D000141 ORTHO05D004993 3.2e-276 955.3 855 62.0
arahy.Tifrunner.gnm1.ann1.52WN7P Arachis hypogaea HOM05D000141 ORTHO05D004993 5.5e-276 954.5 863 62.6
arahy.Tifrunner.gnm1.ann1.5SKZ26 Arachis hypogaea HOM05D000141 ORTHO05D004993 5.5e-276 954.5 863 62.6
Sp6g32970 Schrenkiella parvula HOM05D000141 ORTHO05D004993 7.2e-276 954.1 856 62.4
Thhalv10012459m.g Eutrema salsugineum HOM05D000141 ORTHO05D004993 9.4e-276 953.7 864 61.8
DCAR_003449 Daucus carota HOM05D000141 ORTHO05D004993 1.6e-275 953.0 869 61.3
CARHR279440 Cardamine hirsuta HOM05D000141 ORTHO05D004993 4.7e-275 951.4 864 62.0
BcaB01g06283 Brassica carinata HOM05D000141 ORTHO05D004993 7.9e-275 950.7 862 61.6
ECA246G1560 Erigeron canadensis HOM05D006593 ORTHO05D004993 1.4e-274 949.9 860 62.3
THA.LOC104819293 Tarenaya hassleriana HOM05D000141 ORTHO05D004993 8.8e-274 947.2 879 62.5
CARHR202820 Cardamine hirsuta HOM05D000141 ORTHO05D004993 2.6e-273 945.7 863 61.5
SGA_v2.0_scaffold45G17236 Striga asiatica HOM05D000141 ORTHO05D004993 3.3e-273 945.3 863 61.5
Ah.03g140120 Amaranthus hybridus HOM05D000141 ORTHO05D004993 5.7e-273 944.5 924 59.2
CAN.G1344.1 Capsicum annuum HOM05D000141 ORTHO05D004993 1.9e-268 929.5 866 63.4
HanXRQChr13g0405071 Helianthus annuus HOM05D000141 ORTHO05D004993 1.9e-268 929.5 867 62.2
THA.LOC104801691 Tarenaya hassleriana HOM05D000141 ORTHO05D004993 8.2e-264 914.1 793 65.1
Aa31LG3G16690 Aethionema arabicum HOM05D000141 ORTHO05D004993 1.4e-263 913.3 860 59.4
unitig_748.g7037 Utricularia gibba HOM05D000141 ORTHO05D004993 1.6e-262 909.8 853 60.6
Lsat_1_v5_gn_3_61481 Lactuca sativa HOM05D000141 ORTHO05D004993 4.2e-260 901.7 870 60.1
Lj2C535G3 Lonicera japonica HOM05D000141 ORTHO05D004993 3.1e-255 885.6 829 63.6
CSS0021935 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004993 6.1e-235 818.1 652 70.2
DCAR_016619 Daucus carota HOM05D000141 ORTHO05D004993 1.0e-234 817.4 867 55.8
Gohir.D11G217000 Gossypium hirsutum HOM05D000141 ORTHO05D004993 1.0e-234 817.4 713 67.7
SMO169G0019 Selaginella moellendorffii HOM05D000141 ORTHO05D004993 1.4e-226 790.4 866 53.2
Psat4g119320 Pisum sativum HOM05D000141 ORTHO05D004993 2.0e-225 786.6 760 60.4
Dinv36920 Davidia involucrata HOM05D000141 ORTHO05D004993 6.8e-218 761.5 717 62.2
CSS0023880 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004993 9.2e-215 751.1 662 66.2
AagrBONN_evm.TU.Sc2ySwM_228.4409 Anthoceros agrestis HOM05D000141 ORTHO05D004993 7.8e-214 748.0 888 51.4
TAR628G0162 Trochodendron aralioides HOM05D000141 ORTHO05D004993 1.9e-212 743.4 616 70.8
HPP92_005965 Vanilla planifolia HOM05D000141 ORTHO05D004993 1.1e-210 737.6 552 72.5
QL06p035637 Quercus lobata HOM05D000141 ORTHO05D004993 1.5e-209 733.8 534 72.8
Pp3c4_24010 Physcomitrium patens HOM05D000141 ORTHO05D004993 1.1e-207 727.6 908 48.8
GSVIVG01005935001 Vitis vinifera HOM05D000141 ORTHO05D004993 2.2e-200 703.4 586 70.6
Pp3c3_10921 Physcomitrium patens HOM05D000141 ORTHO05D004993 2.1e-198 696.8 906 48.0
Pp3c3_10920 Physcomitrium patens HOM05D000141 ORTHO05D004993 3.5e-198 696.0 905 48.0
SMO337G0058 Selaginella moellendorffii HOM05D000141 ORTHO05D004993 1.8e-194 683.7 878 49.2
unitig_0.g1718 Utricularia gibba HOM05D000141 ORTHO05D004993 1.8e-194 683.7 646 62.4
Eucgr.I00476 Eucalyptus grandis HOM05D000141 ORTHO05D004993 1.2e-190 671.0 614 63.2
Thhalv10003525m.g Eutrema salsugineum HOM05D000141 ORTHO05D004993 5.6e-188 662.1 614 61.6
Haze_03862 Corylus avellana HOM05D000141 ORTHO05D004993 2.8e-187 659.8 586 64.5
SEGI_00023 Sequoiadendron giganteum HOM05D000141 ORTHO05D004993 1.7e-176 624.0 534 63.9
Mapoly0022s0156 Marchantia polymorpha HOM05D000141 ORTHO05D004993 2.2e-171 607.1 761 49.1
VMungo1215G2324 Vigna mungo HOM05D000141 ORTHO05D004993 4.8e-171 605.9 640 55.8
Oeu012465.2 Olea europaea HOM05D000141 ORTHO05D004993 7.4e-164 582.0 932 43.7
FAN23G0308 Fragaria x ananassa HOM05D000404 ORTHO05D004993 5.3e-162 575.9 488 67.0
FAN23G1526 Fragaria x ananassa HOM05D000141 ORTHO05D004993 2.0e-161 573.9 465 69.5
Nitab4.5_0025132g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004993 2.6e-153 547.0 400 70.8
MD15G1313400 Malus domestica HOM05D000141 ORTHO05D004993 1.8e-149 534.3 522 60.5
Nitab4.5_0004153g0030 Nicotiana tabacum HOM05D000141 ORTHO05D004993 1.2e-132 478.4 467 65.1
Nitab4.5_0001468g0110 Nicotiana tabacum HOM05D000141 ORTHO05D004993 3.7e-131 473.4 467 64.7
CBR_g78819 Chara braunii HOM05D000141 ORTHO05D004993 4.6e-121 439.9 1048 34.3
Haze_03861 Corylus avellana HOM05D000141 ORTHO05D004993 6.6e-104 382.9 284 71.1
GSVIVG01006736001 Vitis vinifera HOM05D000141 ORTHO05D004993 1.1e-103 382.1 283 71.4
VMungo1215G0183 Vigna mungo HOM05D000141 ORTHO05D004993 1.2e-97 362.1 284 68.3
Os06g0217600 Oryza sativa ssp. japonica HOM05D000141 ORTHO05D004993 4.9e-75 287.0 250 60.8
Dinv36919 Davidia involucrata HOM05D000141 ORTHO05D004993 4.8e-54 217.2 150 71.3
MD15G1313600 Malus domestica HOM05D000141 ORTHO05D004993 8.5e-51 206.5 152 65.8
Psat0ss29278g0040 Pisum sativum HOM05D000141 ORTHO05D004993 5.7e-47 193.7 202 58.4
Psat6g213040 Pisum sativum HOM05D000141 ORTHO05D004993 5.7e-47 193.7 146 74.0
QL10p045557 Quercus lobata HOM05D000141 ORTHO05D004993 5.3e-45 187.2 145 62.8
Psat0ss29278g0080 Pisum sativum HOM05D000141 ORTHO05D004993 1.2e-44 186.0 202 56.4
QL10p044591 Quercus lobata HOM05D006593 ORTHO05D004993 2.6e-44 184.9 145 62.1
CSS0025143 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004993 5.9e-44 183.7 152 63.2
SEGI_29645 Sequoiadendron giganteum HOM05D000141 ORTHO05D004993 1.2e-41 176.0 244 47.5
Psat0s1531g0080 Pisum sativum HOM05D000141 ORTHO05D017607 3.6e-41 174.5 364 38.7
PGSC0003DMG400031414 Solanum tuberosum HOM05D000141 ORTHO05D004993 1.5e-39 169.1 117 73.5
HPP92_005964 Vanilla planifolia HOM05D000141 ORTHO05D004993 1.5e-39 169.1 216 46.8
MD15G1313500 Malus domestica HOM05D000141 ORTHO05D017607 2.4e-37 161.8 119 73.9
Lsat_1_v5_gn_1_89581 Lactuca sativa HOM05D000041 ORTHO05D000452 2.2e-35 155.2 121 62.8
CBR_g8597 Chara braunii HOM05D000141 ORTHO05D004993 1.2e-33 149.4 276 36.6
TPR.G36254 Trifolium pratense HOM05D000141 ORTHO05D004993 6.1e-33 147.1 94 85.1
SHI12213 Sapria himalayana HOM05D000141 ORTHO05D004993 8.0e-33 146.7 134 59.0
unitig_0.g1717 Utricularia gibba HOM05D000141 ORTHO05D004993 1.8e-32 145.6 152 52.0
Psat4g119360 Pisum sativum HOM05D000141 ORTHO05D004993 3.6e-25 121.3 102 59.8
COL.COLO4_22337 Corchorus olitorius HOM05D000141 ORTHO05D004993 2.9e-19 101.7 105 55.2
HanXRQChr11g0343651 Helianthus annuus HOM05D001440 ORTHO05D001119 5.0e-19 100.9 69 76.8
Lj2A535G40 Lonicera japonica HOM05D000141 ORTHO05D004993 4.2e-18 97.8 59 83.1
Eucgr.J00708 Eucalyptus grandis HOM05D000329 ORTHO05D045324 5.5e-18 97.4 79 73.4
PSO384G2912 Papaver somniferum HOM05D000141 ORTHO05D004993 2.7e-17 95.1 147 43.5
Eucgr.J00931 Eucalyptus grandis HOM05D000329 ORTHO05D045324 5.2e-16 90.9 60 85.0
SEGI_40086 Sequoiadendron giganteum HOM05D000141 ORTHO05D004993 5.4e-13 80.9 52 75.0
AUR62008555 Chenopodium quinoa HOM05D000874 ORTHO05D001267 4.5e-12 77.8 120 42.5
AUR62039646 Chenopodium quinoa HOM05D000874 ORTHO05D001267 4.5e-12 77.8 120 42.5
AUR62039650 Chenopodium quinoa HOM05D000874 ORTHO05D001267 4.5e-12 77.8 120 42.5
CAN.G1724.1 Capsicum annuum HOM05D000141 ORTHO05D004993 5.0e-11 74.3 54 64.8
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 1.5e-10 72.8 74 55.4
BolC6t38880H Brassica oleracea HOM05D000141 ORTHO05D017607 2.5e-10 72.0 61 63.9
BcaC08g45984 Brassica carinata HOM05D000141 ORTHO05D017607 1.8e-08 65.9 56 66.1
Eucgr.D01644 Eucalyptus grandis HOM05D001632 ORTHO05D001534 5.7e-07 60.8 73 42.5
C06p37770 Brassica napus HOM05D000141 ORTHO05D017607 1.7e-06 59.3 53 66.0
A04p04820 Brassica napus HOM05D000141 ORTHO05D017607 2.9e-06 58.5 72 52.8
A09p34930 Brassica napus HOM05D000141 ORTHO05D017607 6.4e-06 57.4 51 66.7
A09p55270 Brassica napus HOM05D000141 ORTHO05D017607 6.4e-06 57.4 51 66.7
Eucgr.C00013 Eucalyptus grandis HOM05D002279 ORTHO05D002644 8.3e-06 57.0 51 62.7
MBI15_g27814_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D001420 8.3e-06 57.0 34 85.3


User provided reference genes

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