Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0581 Ceratophyllum demersum HOM05D004867 ORTHO05D005729 1.6e-239 832.4 426 100.0
Nn2g15647 Nelumbo nucifera HOM05D004867 ORTHO05D005729 5.5e-51 206.1 463 36.7
TAR369G0777 Trochodendron aralioides HOM05D004867 ORTHO05D005729 1.0e-49 201.8 457 35.2
TAR633G0624 Trochodendron aralioides HOM05D004867 ORTHO05D005729 9.4e-43 178.7 456 33.8
ATR0605G176 Amborella trichopoda HOM05D004867 ORTHO05D005729 3.6e-42 176.8 478 34.1
PSO339G0402 Papaver somniferum HOM05D004867 ORTHO05D005729 3.6e-42 176.8 465 34.2
PSO384G4425 Papaver somniferum HOM05D004867 ORTHO05D005729 1.0e-41 175.3 466 34.1
Sopen01g033570 Solanum pennellii HOM05D004867 ORTHO05D005729 2.5e-40 170.6 459 32.9
PGSC0003DMG402006333 Solanum tuberosum HOM05D004867 ORTHO05D005729 4.3e-40 169.9 459 32.7
CSS0003709 Camellia sinensis var. sinensis HOM05D004867 ORTHO05D005729 5.7e-40 169.5 457 31.7
Prupe.2G004800 Prunus persica HOM05D004867 ORTHO05D005729 5.7e-40 169.5 465 34.0
Oeu013590.1 Olea europaea HOM05D004867 ORTHO05D005729 8.2e-39 165.6 457 31.9
CiPaw.13G001300 Carya illinoinensis HOM05D004867 ORTHO05D005729 1.4e-38 164.9 458 32.5
FvH4_7g00210 Fragaria vesca HOM05D004867 ORTHO05D005729 1.8e-38 164.5 459 34.2
Solyc01g074010.4 Solanum lycopersicum HOM05D004867 ORTHO05D005729 5.3e-38 162.9 461 32.5
COL.COLO4_23912 Corchorus olitorius HOM05D001227 ORTHO05D005729 2.0e-37 161.0 457 33.0
Duzib138G1711 Durio zibethinus HOM05D004867 ORTHO05D005729 2.0e-37 161.0 464 32.1
Ciclev10030862m.g Citrus clementina HOM05D004867 ORTHO05D005729 5.9e-37 159.5 463 32.0
Thecc.01G415900 Theobroma cacao HOM05D004867 ORTHO05D005729 1.3e-36 158.3 455 31.6
Nitab4.5_0000892g0050 Nicotiana tabacum HOM05D004867 ORTHO05D005729 2.9e-36 157.1 471 32.9
Nitab4.5_0003792g0030 Nicotiana tabacum HOM05D004867 ORTHO05D005729 2.9e-36 157.1 462 32.9
CANSAT11G0209 Cannabis sativa HOM05D004867 ORTHO05D005729 6.5e-36 156.0 460 33.3
Cfa010718 Carpinus fangiana HOM05D004867 ORTHO05D005729 6.5e-36 156.0 461 32.3
Sp4g15230 Schrenkiella parvula HOM05D004867 ORTHO05D005729 2.5e-35 154.1 463 31.7
Atru.chr11.2686 Acer truncatum HOM05D004867 ORTHO05D005729 5.5e-35 152.9 464 31.7
CSS0017046 Camellia sinensis var. sinensis HOM05D004867 ORTHO05D005729 5.5e-35 152.9 459 31.8
Peaxi162Scf00058g00820 Petunia axillaris HOM05D004867 ORTHO05D005729 9.4e-35 152.1 491 31.4
DCAR_029621 Daucus carota HOM05D004867 ORTHO05D005729 1.2e-34 151.8 451 30.6
SEGI_25422 Sequoiadendron giganteum HOM05D004867 ORTHO05D005729 1.2e-34 151.8 508 28.5
Actinidia21571 Actinidia chinensis HOM05D004867 ORTHO05D005729 2.1e-34 151.0 384 32.8
Cpa.g.sc189.30 Carica papaya HOM05D004867 ORTHO05D005729 6.1e-34 149.4 469 31.6
Aqoxy2G00085 Aquilegia oxysepala HOM05D004867 ORTHO05D005729 7.9e-34 149.1 454 32.6
Oeu046529.3 Olea europaea HOM05D004867 ORTHO05D005729 1.4e-33 148.3 466 30.3
SalBow5G2297 Salvia bowleyana HOM05D004867 ORTHO05D005729 1.4e-33 148.3 464 31.2
VMungo1080G0666 Vigna mungo HOM05D004867 ORTHO05D005729 3.9e-33 146.7 460 31.5
Zm00001eb183460 Zea mays HOM05D004867 ORTHO05D005729 3.9e-33 146.7 446 31.2
Migut.B01348 Erythranthe guttata HOM05D004867 ORTHO05D005729 6.7e-33 146.0 446 30.0
AT2G32850 Arabidopsis thaliana HOM05D004867 ORTHO05D005729 1.5e-32 144.8 445 30.3
Lj3g0015556 Lotus japonicus HOM05D004867 ORTHO05D005729 1.5e-32 144.8 458 31.2
Thhalv10016354m.g Eutrema salsugineum HOM05D004867 ORTHO05D005729 2.6e-32 144.1 367 32.7
Phvul.005G063700 Phaseolus vulgaris HOM05D004867 ORTHO05D005729 2.6e-32 144.1 455 31.6
MELO3C023945.2 Cucumis melo HOM05D004867 ORTHO05D005729 3.3e-32 143.7 462 31.6
ECA234G3341 Erigeron canadensis HOM05D004867 ORTHO05D005729 3.3e-32 143.7 450 29.6
Carub.0004s1428 Capsella rubella HOM05D004867 ORTHO05D005729 4.4e-32 143.3 459 29.0
PGR031G3548 Punica granatum HOM05D004867 ORTHO05D005729 4.4e-32 143.3 466 30.5
Rhsim01G0132300 Rhododendron simsii HOM05D004867 ORTHO05D005729 7.4e-32 142.5 465 30.8
Eucgr.I00278 Eucalyptus grandis HOM05D004867 ORTHO05D005729 2.8e-31 140.6 462 30.7
CsaV3_3G032420 Cucumis sativus L. HOM05D004867 ORTHO05D005729 4.8e-31 139.8 463 30.7
Glyma.08G150000 Glycine max HOM05D004867 ORTHO05D005729 4.8e-31 139.8 452 31.2
Haze_03260 Corylus avellana HOM05D004867 ORTHO05D005729 6.3e-31 139.4 483 30.6
Psat5g206720 Pisum sativum HOM05D004867 ORTHO05D005729 6.3e-31 139.4 458 29.7
CAN.G1393.5 Capsicum annuum HOM05D004867 ORTHO05D005729 8.2e-31 139.0 447 31.1
CAN.G3313.1 Capsicum annuum HOM05D004867 ORTHO05D005729 8.2e-31 139.0 447 31.1
FAN06G4114 Fragaria x ananassa HOM05D004867 ORTHO05D005729 8.2e-31 139.0 465 32.0
Gohir.D08G062800 Gossypium hirsutum HOM05D004867 ORTHO05D005729 1.8e-30 137.9 454 30.4
Zm00001eb094370 Zea mays HOM05D004867 ORTHO05D005729 1.8e-30 137.9 468 29.1
FAN03G1960 Fragaria x ananassa HOM05D004867 ORTHO05D005729 4.1e-30 136.7 458 32.5
RcHm_v2.0_Chr1g0313621 Rosa chinensis HOM05D004867 ORTHO05D005729 4.1e-30 136.7 348 35.6
FAN10G1317 Fragaria x ananassa HOM05D000038 ORTHO05D005729 7.0e-30 136.0 450 32.2
AL4G28350 Arabidopsis lyrata HOM05D004867 ORTHO05D005729 9.1e-30 135.6 370 30.8
Gorai.004G065000 Gossypium raimondii HOM05D004867 ORTHO05D005729 1.2e-29 135.2 455 30.3
MD14G1085700 Malus domestica HOM05D004867 ORTHO05D005729 1.2e-29 135.2 337 35.0
TWI53G1678 Tripterygium wilfordii HOM05D004867 ORTHO05D005729 1.2e-29 135.2 463 28.7
Sed0010975 Sechium edule HOM05D004867 ORTHO05D005729 2.0e-29 134.4 456 29.6
Sed0025822 Sechium edule HOM05D004867 ORTHO05D005729 7.7e-29 132.5 457 32.4
Gohir.A08G053200 Gossypium hirsutum HOM05D004867 ORTHO05D005729 1.7e-28 131.3 456 30.7
Cc02_g27130 Coffea canephora HOM05D004867 ORTHO05D005729 2.2e-28 131.0 342 31.9
THA.LOC104801018 Tarenaya hassleriana HOM05D004867 ORTHO05D005729 2.9e-28 130.6 367 31.6
Potri.001G228100 Populus trichocarpa HOM05D004867 ORTHO05D005729 6.5e-28 129.4 458 29.7
AUR62008272 Chenopodium quinoa HOM05D004867 ORTHO05D005729 8.5e-28 129.0 439 28.7
SGA_v2.0_scaffold5G03115 Striga asiatica HOM05D004867 ORTHO05D005729 8.5e-28 129.0 466 29.2
GSVIVG01001400001 Vitis vinifera HOM05D004867 ORTHO05D005729 8.5e-28 129.0 337 34.1
Sc01g0010400 Simmondsia chinensis HOM05D004867 ORTHO05D005729 4.2e-27 126.7 456 29.8
Manes.07G001200 Manihot esculenta HOM05D004867 ORTHO05D005729 5.5e-27 126.3 467 28.7
Dinv43921 Davidia involucrata HOM05D004867 ORTHO05D005729 7.2e-27 125.9 158 49.4
Medtr3g026250 Medicago truncatula HOM05D004867 ORTHO05D005729 9.4e-27 125.6 458 28.4
QL04p000390 Quercus lobata HOM05D004867 ORTHO05D005729 9.4e-27 125.6 345 33.0
FAN01G2199 Fragaria x ananassa HOM05D004867 ORTHO05D005729 1.2e-26 125.2 398 33.9
arahy.Tifrunner.gnm1.ann1.8L40SG Arachis hypogaea HOM05D004867 ORTHO05D005729 1.6e-26 124.8 448 28.8
BcaB01g03940 Brassica carinata HOM05D004867 ORTHO05D005729 2.7e-26 124.0 455 29.2
AUR62031032 Chenopodium quinoa HOM05D004867 ORTHO05D005729 2.7e-26 124.0 445 29.2
QL04p002433 Quercus lobata HOM05D004867 ORTHO05D005729 2.7e-26 124.0 345 32.8
Zm00001eb344610 Zea mays HOM05D004867 ORTHO05D005729 2.7e-26 124.0 259 37.1
Glyma.15G269800 Glycine max HOM05D004867 ORTHO05D005729 3.6e-26 123.6 430 30.2
Lalb_Chr25g0283491 Lupinus albus HOM05D004867 ORTHO05D005729 4.7e-26 123.2 378 32.5
Hund24874 Selenicereus undatus HOM05D004867 ORTHO05D005729 6.1e-26 122.9 406 31.0
Aa31LG5G4500 Aethionema arabicum HOM05D004867 ORTHO05D005729 8.0e-26 122.5 448 28.3
SGA_v2.0_scaffold260G45878 Striga asiatica HOM05D004867 ORTHO05D005729 8.0e-26 122.5 461 28.0
TWI73G0181 Tripterygium wilfordii HOM05D004867 ORTHO05D005729 1.8e-25 121.3 461 28.6
HanXRQChr17g0560591 Helianthus annuus HOM05D004867 ORTHO05D005729 2.3e-25 120.9 453 27.4
CARHR126800 Cardamine hirsuta HOM05D004867 ORTHO05D005729 1.5e-24 118.2 459 28.8
BcaC01g05864 Brassica carinata HOM05D004867 ORTHO05D005729 2.0e-24 117.9 462 27.7
ClCG10G012610 Citrullus lanatus HOM05D004867 ORTHO05D005729 3.3e-24 117.1 346 32.1
Lj7A565T27 Lonicera japonica HOM05D004867 ORTHO05D005729 9.7e-24 115.5 463 28.7
EL10Ac3g04943 Beta vulgaris HOM05D004867 ORTHO05D005729 1.3e-23 115.2 406 28.6
C03p21620 Brassica napus HOM05D004867 ORTHO05D005729 2.8e-23 114.0 454 26.2
BolC3t14546H Brassica oleracea HOM05D004867 ORTHO05D005729 2.8e-23 114.0 454 26.2
THA.LOC104816028 Tarenaya hassleriana HOM05D004867 ORTHO05D005729 2.8e-23 114.0 446 28.7
Peaxi162Scf00081g00024 Petunia axillaris HOM05D004867 ORTHO05D005729 3.7e-23 113.6 453 28.9
Sabra16G0136000 Salix brachista HOM05D004867 ORTHO05D005729 4.8e-23 113.2 459 29.0
A03p18560 Brassica napus HOM05D004867 ORTHO05D005729 8.2e-23 112.5 367 29.4
C04p16700 Brassica napus HOM05D004867 ORTHO05D005729 1.4e-22 111.7 442 26.9
Duzib133G0042 Durio zibethinus HOM05D004867 ORTHO05D005729 9.1e-22 109.0 456 27.9
BraA03t11115Z Brassica rapa HOM05D004867 ORTHO05D005729 1.2e-21 108.6 368 28.3
CDE07G1317 Ceratophyllum demersum HOM05D004867 ORTHO05D005729 2.0e-21 107.8 445 28.1
Lsat_1_v5_gn_4_46360 Lactuca sativa HOM05D001227 ORTHO05D005729 5.0e-20 103.2 436 25.7
Ca_25995_v3 Cicer arietinum L. HOM05D004867 ORTHO05D005729 6.5e-20 102.8 472 27.3
Actinidia15860 Actinidia chinensis HOM05D004867 ORTHO05D005729 5.5e-19 99.8 208 38.0
Ah.13g072190 Amaranthus hybridus HOM05D004867 ORTHO05D005729 5.5e-19 99.8 444 26.4
CDE04G1629 Ceratophyllum demersum HOM05D004867 ORTHO05D005729 1.2e-18 98.6 444 26.8
unitig_749.g13484 Utricularia gibba HOM05D004867 ORTHO05D005729 3.6e-18 97.1 325 30.5
TPR.G12241 Trifolium pratense HOM05D004867 ORTHO05D005729 8.0e-18 95.9 459 27.2
EL10Ac5g10816 Beta vulgaris HOM05D004867 ORTHO05D005729 1.4e-17 95.1 459 29.2
Pp3c8_15370 Physcomitrium patens HOM05D004867 ORTHO05D005729 5.2e-17 93.2 381 29.1
Lj9C624G5 Lonicera japonica HOM05D004867 ORTHO05D005729 2.8e-15 87.4 234 34.2
HPP92_023783 Vanilla planifolia HOM05D004867 ORTHO05D005729 3.1e-14 84.0 428 24.5
Mapoly0022s0104 Marchantia polymorpha HOM05D004867 ORTHO05D005729 4.5e-13 80.1 445 24.0
Lalb_Chr19g0131991 Lupinus albus HOM05D004867 ORTHO05D005729 1.7e-12 78.2 446 25.8
Zm00001eb245770 Zea mays HOM05D004867 ORTHO05D005729 8.8e-09 65.9 282 28.4
HanXRQChr01g0018711 Helianthus annuus HOM05D004867 ORTHO05D005729 1.1e-06 58.9 184 29.9
SMO147G0308 Selaginella moellendorffii HOM05D004867 ORTHO05D005729 1.4e-06 58.5 181 35.4


User provided reference genes

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