Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 9.1e-136 486.9 241 100.0
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 1.9e-80 303.1 207 71.0
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 3.2e-80 302.4 207 68.1
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 6.0e-79 298.1 214 69.6
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 2.3e-78 296.2 223 64.1
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 3.9e-78 295.4 214 69.2
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 1.1e-77 293.9 207 66.7
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 5.6e-77 291.6 204 68.6
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 9.6e-77 290.8 207 66.7
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 1.2e-76 290.4 206 66.5
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 2.8e-76 289.3 206 67.0
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 3.6e-76 288.9 207 66.2
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 3.6e-76 288.9 210 66.7
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 4.7e-76 288.5 207 67.1
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 6.2e-76 288.1 207 67.1
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 8.1e-76 287.7 224 61.2
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 1.4e-75 287.0 221 62.9
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 1.8e-75 286.6 207 65.2
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 2.4e-75 286.2 223 63.7
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 3.1e-75 285.8 206 65.5
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 3.1e-75 285.8 207 65.7
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 5.2e-75 285.0 207 65.2
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 6.8e-75 284.6 208 66.3
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 1.5e-74 283.5 207 66.2
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 2.6e-74 282.7 207 67.1
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 2.6e-74 282.7 207 63.8
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 2.6e-74 282.7 206 66.5
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 3.4e-74 282.3 206 64.1
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 4.4e-74 282.0 207 67.1
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 4.4e-74 282.0 212 63.2
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 4.4e-74 282.0 207 64.3
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 4.4e-74 282.0 215 65.1
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 7.6e-74 281.2 206 63.1
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 7.6e-74 281.2 207 65.2
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.3e-73 280.4 207 64.7
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 1.7e-73 280.0 209 65.6
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 2.9e-73 279.3 207 63.3
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 4.9e-73 278.5 207 65.7
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 6.4e-73 278.1 207 64.3
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.1e-72 277.3 208 63.9
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 1.9e-72 276.6 215 61.4
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 1.9e-72 276.6 194 68.0
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 1.9e-72 276.6 207 64.3
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 2.4e-72 276.2 206 62.6
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 2.4e-72 276.2 208 63.0
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 3.2e-72 275.8 208 63.5
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 3.2e-72 275.8 208 63.5
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 3.2e-72 275.8 210 62.4
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 4.2e-72 275.4 208 63.0
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 1.6e-71 273.5 207 61.8
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 2.7e-71 272.7 207 62.8
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 3.5e-71 272.3 207 62.8
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 4.6e-71 271.9 207 61.8
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 6.0e-71 271.6 207 64.7
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 1.3e-70 270.4 208 63.0
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 1.3e-70 270.4 207 61.8
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 3.9e-70 268.9 193 66.3
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 3.9e-70 268.9 207 62.3
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 6.6e-70 268.1 211 62.6
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 8.7e-70 267.7 211 63.0
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 1.5e-69 266.9 207 60.9
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 1.9e-69 266.5 208 61.1
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 1.9e-69 266.5 207 60.9
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 1.9e-69 266.5 207 60.9
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 2.5e-69 266.2 215 62.8
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 2.5e-69 266.2 207 59.9
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 4.3e-69 265.4 209 60.8
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 7.3e-69 264.6 207 60.9
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 1.6e-68 263.5 207 61.4
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 2.1e-68 263.1 227 58.1
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 2.8e-68 262.7 207 59.4
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 4.8e-68 261.9 228 57.9
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 1.1e-67 260.8 208 60.6
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 1.4e-67 260.4 207 59.9
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 1.4e-67 260.4 207 59.9
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.4e-67 260.4 208 63.5
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 3.1e-67 259.2 208 63.0
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 3.1e-67 259.2 207 60.4
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 4.0e-67 258.8 207 59.4
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 4.0e-67 258.8 207 59.9
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 5.3e-67 258.5 207 58.9
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 6.9e-67 258.1 223 57.0
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 1.2e-66 257.3 210 59.0
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 2.0e-66 256.5 208 59.6
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 3.4e-66 255.8 208 57.7
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 4.4e-66 255.4 211 60.2
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 9.9e-66 254.2 207 58.9
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 1.3e-65 253.8 207 57.0
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 6.4e-65 251.5 208 61.5
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 1.4e-64 250.4 206 61.7
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 2.4e-64 249.6 208 59.6
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 1.2e-63 247.3 206 60.2
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 7.6e-58 228.0 180 60.0
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 6.0e-55 218.4 232 49.1
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 1.1e-51 207.6 178 61.2
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 3.4e-50 202.6 207 50.7
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 2.3e-46 189.9 146 58.9
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 5.1e-46 188.7 134 66.4
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 5.1e-46 188.7 218 41.7
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 2.5e-40 169.9 205 41.5
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 1.3e-38 164.1 146 57.5
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 1.5e-37 160.6 146 53.4
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 1.6e-36 157.1 125 57.6
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 2.2e-36 156.8 206 40.8
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 3.9e-30 136.0 211 35.1
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 1.1e-29 134.4 185 40.5
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 2.0e-29 133.7 118 54.2
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 2.6e-29 133.3 210 33.3
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 7.4e-29 131.7 208 34.1
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 2.2e-25 120.2 110 55.5
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 1.9e-24 117.1 72 72.2
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 6.1e-23 112.1 162 38.9
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 8.8e-22 108.2 74 68.9
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 2.5e-16 90.1 211 26.5
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 7.7e-10 68.6 89 47.2
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 7.7e-10 68.6 89 47.2


User provided reference genes

Program Settings