Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 7.5e-167 590.5 310 100.0
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 1.1e-90 337.4 213 85.0
CDE10G0809 Ceratophyllum demersum HOM05D000070 ORTHO05D006683 2.6e-34 150.2 87 88.5
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 2.8e-20 103.6 235 40.9
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 3.6e-20 103.2 242 40.1
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 6.2e-20 102.4 212 41.0
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.1e-19 101.7 212 40.6
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 1.4e-19 101.3 238 39.9
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 1.8e-19 100.9 243 44.0
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 1.8e-19 100.9 233 40.8
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 1.8e-19 100.9 218 42.2
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 2.4e-19 100.5 236 37.7
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 4.0e-19 99.8 229 40.6
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 1.5e-18 97.8 240 37.5
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 2.6e-18 97.1 237 38.4
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 5.8e-18 95.9 234 43.6
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 7.6e-18 95.5 222 39.2
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 9.9e-18 95.1 210 40.0
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 1.3e-17 94.7 235 36.2
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 1.7e-17 94.4 254 40.2
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 4.9e-17 92.8 224 38.4
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 8.4e-17 92.0 220 38.2
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 3.2e-16 90.1 223 39.9
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 3.2e-16 90.1 207 39.1
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 7.1e-16 89.0 213 38.5
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 7.1e-16 89.0 215 39.1
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 4.6e-15 86.3 221 37.1
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 6.0e-15 85.9 219 36.5
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 1.7e-14 84.3 235 37.4
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 2.3e-14 84.0 195 37.4
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 2.3e-14 84.0 222 38.7
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 2.3e-14 84.0 222 38.3
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 3.0e-14 83.6 148 39.2
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 6.6e-14 82.4 232 37.1
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 6.6e-14 82.4 206 40.3
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 8.7e-14 82.0 221 38.5
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 1.1e-13 81.6 239 34.3
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 1.9e-13 80.9 211 34.1
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 3.3e-13 80.1 210 37.1
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 4.3e-13 79.7 215 41.4
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 4.3e-13 79.7 222 36.5
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 2.8e-12 77.0 236 32.2
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 4.8e-12 76.3 237 36.7
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 4.8e-12 76.3 212 36.3
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 8.1e-12 75.5 158 38.6
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 8.1e-12 75.5 208 37.5
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 1.1e-11 75.1 237 35.0
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 4.0e-11 73.2 236 34.3
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 4.0e-11 73.2 227 33.5
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 5.3e-11 72.8 225 36.0
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 5.3e-11 72.8 223 35.9
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 1.2e-10 71.6 216 35.6
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 1.5e-10 71.2 220 37.3
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 2.0e-10 70.9 196 35.2
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 3.4e-10 70.1 216 35.6
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 3.4e-10 70.1 219 35.2
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 3.4e-10 70.1 216 35.6
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 3.4e-10 70.1 216 35.6
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 3.4e-10 70.1 225 36.9
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 4.5e-10 69.7 160 41.2
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 4.5e-10 69.7 226 36.3
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 5.8e-10 69.3 217 36.9
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 7.6e-10 68.9 225 36.9
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 9.9e-10 68.6 227 34.8
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 1.7e-09 67.8 234 36.8
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 2.9e-09 67.0 262 32.4
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 2.9e-09 67.0 148 41.9
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 3.8e-09 66.6 232 36.2
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 5.4e-08 62.8 229 33.6
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 9.3e-08 62.0 170 36.5
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 9.3e-08 62.0 241 32.0
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 1.2e-07 61.6 172 36.0
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 2.1e-07 60.8 229 36.2
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 3.5e-07 60.1 227 38.3
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 3.5e-07 60.1 155 38.1
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 4.6e-07 59.7 211 33.2
ATR0602G239 Amborella trichopoda HOM05D007603 ORTHO05D009604 4.6e-07 59.7 309 29.1
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 7.9e-07 58.9 236 36.9
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 2.3e-06 57.4 243 35.4
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 3.0e-06 57.0 208 31.7
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 3.0e-06 57.0 188 31.4


User provided reference genes

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