Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 2.0e-47 192.2 102 100.0
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 5.3e-37 157.5 101 81.2
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 1.2e-36 156.4 101 78.2
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 2.7e-36 155.2 101 78.2
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 1.0e-35 153.3 101 77.2
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 2.2e-35 152.1 100 77.0
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 2.2e-35 152.1 101 76.2
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 2.9e-35 151.8 101 76.2
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 6.5e-35 150.6 101 75.2
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 6.5e-35 150.6 101 75.2
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 8.5e-35 150.2 101 73.3
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 1.1e-34 149.8 101 77.2
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 1.1e-34 149.8 101 75.2
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 1.1e-34 149.8 101 75.2
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 1.5e-34 149.4 101 76.2
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 1.5e-34 149.4 101 74.3
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 1.9e-34 149.1 101 74.3
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 2.5e-34 148.7 101 77.2
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 2.5e-34 148.7 101 74.3
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 2.5e-34 148.7 101 76.2
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 2.5e-34 148.7 101 75.2
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 3.2e-34 148.3 101 73.3
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 3.2e-34 148.3 101 73.3
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 3.2e-34 148.3 101 73.3
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 4.2e-34 147.9 101 74.3
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 4.2e-34 147.9 101 74.3
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 4.2e-34 147.9 101 74.3
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 4.2e-34 147.9 101 74.3
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 4.2e-34 147.9 101 74.3
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 5.5e-34 147.5 101 73.3
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 7.2e-34 147.1 101 75.2
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 7.2e-34 147.1 101 73.3
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 9.4e-34 146.7 101 73.3
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 9.4e-34 146.7 101 73.3
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 9.4e-34 146.7 101 73.3
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 1.2e-33 146.4 101 70.3
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 1.6e-33 146.0 101 73.3
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 1.6e-33 146.0 101 74.3
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 1.6e-33 146.0 101 72.3
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 1.6e-33 146.0 101 73.3
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 2.1e-33 145.6 101 73.3
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 2.1e-33 145.6 101 72.3
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 2.7e-33 145.2 101 72.3
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 2.7e-33 145.2 101 73.3
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 3.6e-33 144.8 101 74.3
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 4.7e-33 144.4 101 74.3
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.7e-33 144.4 101 74.3
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 4.7e-33 144.4 101 71.3
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 4.7e-33 144.4 101 72.3
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 4.7e-33 144.4 101 73.3
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 4.7e-33 144.4 101 74.3
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 6.1e-33 144.1 101 73.3
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 6.1e-33 144.1 101 71.3
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 6.1e-33 144.1 100 73.0
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 6.1e-33 144.1 101 71.3
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 6.1e-33 144.1 101 72.3
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 6.1e-33 144.1 101 72.3
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 8.0e-33 143.7 101 72.3
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 8.0e-33 143.7 101 74.3
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 8.0e-33 143.7 101 72.3
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 1.0e-32 143.3 101 73.3
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 1.0e-32 143.3 101 71.3
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.0e-32 143.3 101 71.3
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 1.0e-32 143.3 101 74.3
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 1.4e-32 142.9 101 75.2
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 1.8e-32 142.5 101 72.3
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 1.8e-32 142.5 101 71.3
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 1.8e-32 142.5 101 72.3
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 2.3e-32 142.1 101 70.3
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 2.3e-32 142.1 101 75.2
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 3.0e-32 141.7 101 70.3
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 4.0e-32 141.4 101 70.3
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 4.0e-32 141.4 101 73.3
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 5.2e-32 141.0 101 72.3
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 5.2e-32 141.0 101 72.3
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 5.2e-32 141.0 101 72.3
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 6.8e-32 140.6 101 69.3
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 6.8e-32 140.6 101 71.3
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 8.8e-32 140.2 101 69.3
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.2e-31 139.8 100 72.0
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 1.2e-31 139.8 101 71.3
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 2.0e-31 139.0 101 71.3
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 2.6e-31 138.7 101 67.3
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 2.6e-31 138.7 101 71.3
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 4.4e-31 137.9 100 69.0
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 4.4e-31 137.9 101 67.3
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 5.7e-31 137.5 101 66.3
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 7.5e-31 137.1 102 69.6
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 9.8e-31 136.7 101 70.3
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 1.3e-30 136.3 101 71.3
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 2.2e-30 135.6 101 67.3
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 2.2e-30 135.6 101 65.3
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 2.8e-30 135.2 102 66.7
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 3.7e-30 134.8 101 68.3
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 6.3e-30 134.0 122 62.3
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 1.4e-29 132.9 97 73.2
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 3.1e-29 131.7 102 65.7
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 9.1e-29 130.2 128 57.0
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 5.9e-28 127.5 114 62.3
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 2.3e-24 115.5 101 54.5
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 6.3e-22 107.5 70 74.3
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 1.8e-21 105.9 101 51.5
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 2.3e-19 99.0 101 49.5
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 3.8e-19 98.2 108 50.9
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 2.5e-18 95.5 101 43.6
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 4.9e-14 81.3 54 74.1
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 1.0e-11 73.6 55 65.5
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 6.8e-08 60.8 55 56.4
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 5.8e-07 57.8 39 76.9


User provided reference genes

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