Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0488 Ceratophyllum demersum HOM05D005057 ORTHO05D006570 8.0e-244 846.7 426 100.0
PSO063G4235 Papaver somniferum HOM05D005057 ORTHO05D006570 1.6e-172 609.8 399 77.4
Aqoxy4G00443 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 3.4e-170 602.1 360 83.9
ClCG03G007800 Citrullus lanatus HOM05D005057 ORTHO05D006570 1.3e-169 600.1 409 75.1
MD10G1281300 Malus domestica HOM05D005057 ORTHO05D006570 1.7e-169 599.7 366 80.1
Prupe.4G059900 Prunus persica HOM05D005057 ORTHO05D006570 1.7e-169 599.7 405 75.3
Migut.H01447 Erythranthe guttata HOM05D005057 ORTHO05D006570 2.9e-169 599.0 427 72.8
MELO3C002642.2 Cucumis melo HOM05D005057 ORTHO05D006570 4.9e-169 598.2 363 82.4
Actinidia16804 Actinidia chinensis HOM05D005057 ORTHO05D006570 1.1e-168 597.0 357 82.6
CiPaw.09G069000 Carya illinoinensis HOM05D005057 ORTHO05D006570 3.2e-168 595.5 420 72.9
CsaV3_1G033430 Cucumis sativus L. HOM05D005057 ORTHO05D006570 1.2e-167 593.6 369 80.5
CANSAT35G0522 Cannabis sativa HOM05D005057 ORTHO05D006570 1.6e-167 593.2 369 79.9
Thecc.06G172400 Theobroma cacao HOM05D005057 ORTHO05D006570 3.5e-167 592.0 376 78.5
Hma1.2p1_0155F.1_g068170 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 7.9e-167 590.9 364 80.2
HanXRQChr13g0397391 Helianthus annuus HOM05D005057 ORTHO05D006570 2.3e-166 589.3 385 77.1
Atru.chr10.1683 Acer truncatum HOM05D005057 ORTHO05D006570 8.7e-166 587.4 362 80.1
Gorai.010G158900 Gossypium raimondii HOM05D005057 ORTHO05D006570 2.5e-165 585.9 362 80.4
GSVIVG01021196001 Vitis vinifera HOM05D005057 ORTHO05D006570 3.3e-165 585.5 407 73.2
Ciclev10014965m.g Citrus clementina HOM05D005057 ORTHO05D006570 9.7e-165 583.9 360 80.6
RcHm_v2.0_Chr5g0010551 Rosa chinensis HOM05D005057 ORTHO05D006570 9.7e-165 583.9 404 74.0
Gohir.A06G130800 Gossypium hirsutum HOM05D005057 ORTHO05D006570 8.2e-164 580.9 376 77.7
Medtr2g015860 Medicago truncatula HOM05D005057 ORTHO05D006570 8.2e-164 580.9 398 74.6
FvH4_3g07940 Fragaria vesca HOM05D005057 ORTHO05D006570 2.4e-163 579.3 359 80.2
PGR004G2757 Punica granatum HOM05D005057 ORTHO05D006570 2.4e-163 579.3 360 80.6
Manes.16G037800 Manihot esculenta HOM05D005057 ORTHO05D006570 3.1e-163 578.9 368 78.5
SalBow7G0088 Salvia bowleyana HOM05D005057 ORTHO05D006570 4.1e-163 578.6 416 71.9
Ca_00428_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 9.0e-163 577.4 369 78.6
FAN07G2484 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.2e-162 577.0 357 79.3
Sp4g16440 Schrenkiella parvula HOM05D005057 ORTHO05D006570 1.2e-162 577.0 392 75.5
Potri.011G065000 Populus trichocarpa HOM05D005057 ORTHO05D006570 2.0e-162 576.2 421 70.3
Sabra11G0046800 Salix brachista HOM05D005057 ORTHO05D006570 2.0e-162 576.2 389 74.0
Eucgr.D00512 Eucalyptus grandis HOM05D005057 ORTHO05D006570 2.6e-162 575.9 369 76.7
Rhsim13G0191300 Rhododendron simsii HOM05D005057 ORTHO05D006570 3.4e-162 575.5 352 81.0
Cc02_g14710 Coffea canephora HOM05D005057 ORTHO05D006570 1.3e-161 573.5 395 74.2
Sopen02g021880 Solanum pennellii HOM05D005057 ORTHO05D006570 1.7e-161 573.2 383 77.0
Lalb_Chr15g0089481 Lupinus albus HOM05D005057 ORTHO05D006570 2.2e-161 572.8 370 76.8
AL4G30000 Arabidopsis lyrata HOM05D005057 ORTHO05D006570 3.8e-161 572.0 383 76.5
BcaB02g10615 Brassica carinata HOM05D005057 ORTHO05D006570 5.0e-161 571.6 358 79.9
ATR0602G189 Amborella trichopoda HOM05D005057 ORTHO05D006570 8.5e-161 570.9 379 76.8
ECA236G3111 Erigeron canadensis HOM05D005057 ORTHO05D006570 8.5e-161 570.9 393 74.8
Carub.0004s1572 Capsella rubella HOM05D005057 ORTHO05D006570 1.1e-160 570.5 368 78.0
CAN.G370.63 Capsicum annuum HOM05D005057 ORTHO05D006570 1.1e-160 570.5 352 80.1
BraA05t20104Z Brassica rapa HOM05D005057 ORTHO05D006570 1.4e-160 570.1 383 76.0
Thhalv10016658m.g Eutrema salsugineum HOM05D005057 ORTHO05D006570 1.4e-160 570.1 383 76.5
A05p11560 Brassica napus HOM05D005057 ORTHO05D006570 2.7e-159 565.8 376 76.3
AT2G34090 Arabidopsis thaliana HOM05D005057 ORTHO05D006570 4.6e-159 565.1 399 74.4
THA.LOC104814250 Tarenaya hassleriana HOM05D005057 ORTHO05D006570 4.6e-159 565.1 414 71.5
Glyma.13G230500 Glycine max HOM05D005057 ORTHO05D006570 1.0e-158 563.9 358 79.1
TWI38G0714 Tripterygium wilfordii HOM05D005057 ORTHO05D006570 1.8e-158 563.1 404 72.3
arahy.Tifrunner.gnm1.ann1.9TM733 Arachis hypogaea HOM05D005057 ORTHO05D006570 3.0e-158 562.4 356 78.1
arahy.Tifrunner.gnm1.ann1.E17GNY Arachis hypogaea HOM05D005057 ORTHO05D006570 3.0e-158 562.4 356 78.1
Lj6g0017686 Lotus japonicus HOM05D005057 ORTHO05D006570 1.1e-157 560.5 430 69.5
Aa31LG9G13900 Aethionema arabicum HOM05D005057 ORTHO05D006570 4.3e-157 558.5 397 72.3
C04p15030 Brassica napus HOM05D005057 ORTHO05D006570 2.2e-156 556.2 399 72.4
Sc12g0008060 Simmondsia chinensis HOM05D005057 ORTHO05D006570 2.2e-156 556.2 365 76.4
CARHR128190 Cardamine hirsuta HOM05D005057 ORTHO05D006570 1.1e-155 553.9 352 79.0
DCAR_004016 Daucus carota HOM05D005057 ORTHO05D006570 1.8e-155 553.1 367 76.8
Oeu041787.3 Olea europaea HOM05D005057 ORTHO05D006570 4.1e-155 552.0 351 78.3
BolC4t23078H Brassica oleracea HOM05D005057 ORTHO05D006570 1.2e-154 550.4 411 71.3
Lj2A297G103 Lonicera japonica HOM05D005057 ORTHO05D006570 1.2e-154 550.4 374 74.3
AUR62031175 Chenopodium quinoa HOM05D005057 ORTHO05D006570 5.9e-154 548.1 350 77.7
VMungo0540G0206 Vigna mungo HOM05D005057 ORTHO05D006570 8.5e-153 544.3 367 75.7
SGA_v2.0_scaffold307G48045 Striga asiatica HOM05D005057 ORTHO05D006570 1.4e-152 543.5 442 65.6
Ah.09g233650 Amaranthus hybridus HOM05D005057 ORTHO05D006570 4.7e-151 538.5 372 73.9
vmacro03932 Vaccinium macrocarpon HOM05D005057 ORTHO05D006570 6.1e-151 538.1 377 75.3
FvH4_4g20380 Fragaria vesca HOM05D005057 ORTHO05D006570 3.9e-150 535.4 337 77.7
Aqoxy12s001 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 3.3e-149 532.3 347 79.5
EL10Ac8g20510 Beta vulgaris HOM05D005057 ORTHO05D006570 1.2e-146 523.9 393 69.0
MBI06_g25988_MAGBIO Magnolia biondii HOM05D005057 ORTHO05D006570 2.5e-144 516.2 381 72.2
MSTRG.13217 Avicennia marina HOM05D005057 ORTHO05D006570 9.4e-144 514.2 369 71.5
Haze_06250 Corylus avellana HOM05D005057 ORTHO05D006570 2.1e-143 513.1 387 70.5
Gohir.D06G136700 Gossypium hirsutum HOM05D005057 ORTHO05D006570 6.1e-143 511.5 362 71.8
Phvul.006G176700 Phaseolus vulgaris HOM05D005057 ORTHO05D006570 2.3e-142 509.6 370 71.6
AagrBONN_evm.TU.Sc2ySwM_344.2851 Anthoceros agrestis HOM05D005057 ORTHO05D006570 5.7e-141 505.0 367 69.2
Mapoly0152s0011 Marchantia polymorpha HOM05D005057 ORTHO05D006570 5.9e-138 495.0 389 66.3
Lsat_1_v5_gn_7_23040 Lactuca sativa HOM05D005057 ORTHO05D006570 1.1e-136 490.7 394 66.5
Dinv04618 Davidia involucrata HOM05D005057 ORTHO05D006570 1.9e-136 490.0 373 70.2
Pp3c16_13000 Physcomitrium patens HOM05D005057 ORTHO05D006570 1.6e-135 486.9 366 68.0
Zm00001eb162010 Zea mays HOM05D005057 ORTHO05D006570 3.6e-135 485.7 292 82.2
FAN11G1223 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.8e-134 483.4 401 64.6
SMO142G0032 Selaginella moellendorffii HOM05D005057 ORTHO05D006570 1.7e-132 476.9 353 67.7
FAN25G1331 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.1e-131 474.2 392 64.5
Hma1.2p1_0155F.1_g068180 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 6.5e-129 464.9 349 68.8
Sed0014368 Sechium edule HOM05D005057 ORTHO05D006570 8.5e-129 464.5 408 62.3
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 3.2e-128 462.6 351 68.9
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 1.5e-125 453.8 389 62.5
FAN16G2413 Fragaria x ananassa HOM05D005057 ORTHO05D006570 9.8e-125 451.1 353 67.1
Hund21184 Selenicereus undatus HOM05D005057 ORTHO05D006570 9.8e-125 451.1 386 63.0
PSO782G3653 Papaver somniferum HOM05D005057 ORTHO05D006570 3.7e-124 449.1 342 70.2
Duzib160G0357 Durio zibethinus HOM05D005057 ORTHO05D006570 2.5e-120 436.4 362 62.4
Cpa.g.sc7.56 Carica papaya HOM05D005057 ORTHO05D006570 1.4e-118 430.6 369 62.9
Psat1g199000 Pisum sativum HOM05D005057 ORTHO05D006570 6.1e-111 405.2 251 81.3
PRCOL_00006187 Prasinoderma coloniale HOM05D005057 ORTHO05D006570 3.7e-108 396.0 368 56.5
MCO11G641 Micromonas commoda HOM05D005057 ORTHO05D006570 6.0e-106 388.7 366 56.3
Cre01.g033700 Chlamydomonas reinhardtii HOM05D005057 ORTHO05D006570 6.2e-103 378.6 431 50.3
Nn1g09052 Nelumbo nucifera HOM05D005057 ORTHO05D006570 6.0e-98 362.1 223 82.1
TPR.G11697 Trifolium pratense HOM05D005057 ORTHO05D006570 1.0e-89 334.7 222 75.7
Solyc02g076950.2 Solanum lycopersicum HOM05D005057 ORTHO05D006570 3.6e-87 326.2 213 78.9
Nitab4.5_0000681g0230 Nicotiana tabacum HOM05D005057 ORTHO05D006570 1.9e-80 303.9 223 72.6
Nitab4.5_0003322g0070 Nicotiana tabacum HOM05D005057 ORTHO05D006570 1.8e-78 297.4 233 68.2
Lalb_Chr18g0059151 Lupinus albus HOM05D005057 ORTHO05D006570 1.5e-77 294.3 237 68.4
TAR626G1061 Trochodendron aralioides HOM05D005057 ORTHO05D006570 1.2e-69 268.1 173 77.5
Peaxi162Scf00261g01011 Petunia axillaris HOM05D005057 ORTHO05D006570 1.9e-67 260.8 169 74.0
unitig_22.g6755 Utricularia gibba HOM05D005057 ORTHO05D006570 2.1e-66 257.3 155 81.9
Nn1g09100 Nelumbo nucifera HOM05D005057 ORTHO05D006570 4.6e-66 256.1 159 81.1
QL05p046461 Quercus lobata HOM05D005057 ORTHO05D006570 5.6e-64 249.2 169 76.9
MD05G1302500 Malus domestica HOM05D005057 ORTHO05D006570 4.8e-63 246.1 339 45.7
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 1.8e-62 244.2 496 36.1
TPR.G30010 Trifolium pratense HOM05D005057 ORTHO05D006570 6.9e-62 242.3 216 61.6
Os01g0613900 Oryza sativa ssp. japonica HOM05D005057 ORTHO05D006570 9.0e-62 241.9 137 85.4
BcaC04g22954 Brassica carinata HOM05D005057 ORTHO05D006570 1.9e-59 234.2 218 62.4
C09p55570 Brassica napus HOM05D005057 ORTHO05D006570 1.9e-59 234.2 218 62.4
BolC9t54241H Brassica oleracea HOM05D005057 ORTHO05D006570 1.9e-59 234.2 218 62.4
BcaC01g06160 Brassica carinata HOM05D005057 ORTHO05D006570 1.3e-57 228.0 221 63.3
Ca_30957_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 1.3e-55 221.5 164 69.5
Nitab4.5_0003322g0060 Nicotiana tabacum HOM05D005057 ORTHO05D006570 3.7e-55 219.9 151 72.2
Nitab4.5_0000681g0220 Nicotiana tabacum HOM05D005057 ORTHO05D006570 4.8e-55 219.5 151 71.5
Lalb_Chr18g0059161 Lupinus albus HOM05D005057 ORTHO05D006570 3.8e-52 209.9 151 69.5
TAR626G0988 Trochodendron aralioides HOM05D005057 ORTHO05D006570 1.2e-45 188.3 137 73.7
HPP92_020166 Vanilla planifolia HOM05D005057 ORTHO05D006570 5.5e-43 179.5 139 67.6
HPP92_020184 Vanilla planifolia HOM05D005057 ORTHO05D006570 6.1e-42 176.0 128 69.5
SEGI_02925 Sequoiadendron giganteum HOM05D005057 ORTHO05D006570 1.7e-36 157.9 105 73.3
unitig_22.g6756 Utricularia gibba HOM05D005057 ORTHO05D006570 1.6e-34 151.4 141 60.3
Psat1g199040 Pisum sativum HOM05D005057 ORTHO05D006570 7.0e-30 136.0 95 68.4
BolC4t26729H Brassica oleracea HOM05D005057 ORTHO05D006570 2.6e-29 134.0 102 71.6
BolC7t41970H Brassica oleracea HOM05D005057 ORTHO05D006570 1.0e-28 132.1 102 70.6
COL.COLO4_25087 Corchorus olitorius HOM05D005057 ORTHO05D006570 5.0e-28 129.8 79 75.9
Glyma.14G170500 Glycine max HOM05D005057 ORTHO05D006570 2.7e-26 124.0 151 49.0
RcHm_v2.0_Chr5g0010591 Rosa chinensis HOM05D005057 ORTHO05D006570 4.4e-24 116.7 72 76.4
CSS0031450 Camellia sinensis var. sinensis HOM05D005057 ORTHO05D006570 9.7e-24 115.5 85 67.1
HPP92_020183 Vanilla planifolia HOM05D005057 ORTHO05D006570 5.9e-21 106.3 86 61.6
unitig_22.g6754 Utricularia gibba HOM05D005057 ORTHO05D006570 1.9e-19 101.3 108 48.1
MD16G1033100 Malus domestica HOM05D005057 ORTHO05D006570 2.7e-18 97.4 62 74.2
PSO063G0949 Papaver somniferum HOM05D005057 ORTHO05D006570 7.5e-16 89.4 179 38.0
Medtr2g015780 Medicago truncatula HOM05D005057 ORTHO05D006570 2.2e-12 77.8 58 65.5
BcaC01g03610 Brassica carinata HOM05D005057 ORTHO05D019871 5.5e-11 73.2 73 52.1
BolC8t49834H Brassica oleracea HOM05D005057 ORTHO05D019871 4.4e-08 63.5 132 35.6
CDE04G0254 Ceratophyllum demersum HOM05D001182 ORTHO05D008051 9.1e-06 55.8 26 96.2


User provided reference genes

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