Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 9.6e-101 370.2 187 100.0
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 1.7e-65 253.1 171 73.1
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 7.2e-64 247.7 169 74.6
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 2.1e-63 246.1 170 72.9
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 2.7e-63 245.7 169 71.6
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 3.6e-63 245.4 193 67.4
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 1.4e-62 243.4 169 74.0
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 1.8e-62 243.0 170 73.5
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 8.8e-62 240.7 170 70.6
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 1.5e-61 240.0 193 66.8
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 9.7e-61 237.3 170 71.2
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 1.3e-60 236.9 170 67.6
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 2.8e-60 235.7 169 70.4
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 7.0e-59 231.1 168 69.6
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 2.0e-58 229.6 172 66.9
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 2.6e-58 229.2 172 66.9
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 4.5e-58 228.4 185 65.9
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 4.5e-58 228.4 169 70.4
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 5.0e-57 224.9 171 69.0
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 5.0e-57 224.9 181 64.6
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 5.0e-57 224.9 161 70.8
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 6.5e-57 224.6 168 68.5
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 8.5e-57 224.2 171 67.3
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 2.5e-56 222.6 171 67.3
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 2.5e-56 222.6 173 64.2
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 3.2e-56 222.2 171 66.1
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 3.2e-56 222.2 192 64.1
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 4.2e-56 221.9 190 61.1
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 4.2e-56 221.9 171 66.1
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 1.2e-55 220.3 188 64.4
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 1.6e-55 219.9 186 61.3
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 1.6e-55 219.9 168 65.5
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 1.6e-55 219.9 168 66.1
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 2.1e-55 219.5 171 64.9
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 2.7e-55 219.2 196 62.2
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 4.7e-55 218.4 170 64.7
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 1.8e-54 216.5 171 64.9
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 2.3e-54 216.1 167 65.3
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 2.3e-54 216.1 170 67.6
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 2.3e-54 216.1 178 61.2
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 3.0e-54 215.7 168 64.3
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 3.0e-54 215.7 185 61.6
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 3.0e-54 215.7 168 68.5
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 3.0e-54 215.7 184 62.5
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 4.0e-54 215.3 192 64.6
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 4.0e-54 215.3 186 60.2
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 4.0e-54 215.3 179 62.6
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 8.8e-54 214.2 179 60.9
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 8.8e-54 214.2 179 60.9
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 1.2e-53 213.8 165 64.8
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 1.5e-53 213.4 170 67.6
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 2.0e-53 213.0 188 61.2
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 2.6e-53 212.6 176 64.2
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 2.6e-53 212.6 192 58.9
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 3.4e-53 212.2 172 64.5
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 4.4e-53 211.8 191 58.1
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 5.7e-53 211.5 173 65.3
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 7.5e-53 211.1 191 60.2
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 3.7e-52 208.8 171 66.1
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 4.8e-52 208.4 172 64.0
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 8.3e-52 207.6 172 63.4
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 8.3e-52 207.6 184 59.8
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 8.3e-52 207.6 175 61.7
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 2.4e-51 206.1 175 62.9
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 3.1e-51 205.7 177 58.8
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 1.2e-50 203.8 169 64.5
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 1.2e-50 203.8 169 62.1
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 2.7e-50 202.6 168 64.9
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 3.5e-50 202.2 186 60.8
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 3.5e-50 202.2 170 63.5
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 7.7e-50 201.1 170 62.9
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 7.7e-50 201.1 168 63.7
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 1.0e-49 200.7 186 58.6
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 1.0e-49 200.7 168 62.5
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 1.0e-49 200.7 168 61.3
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.3e-49 200.3 181 58.0
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.7e-49 199.9 194 56.2
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 2.9e-49 199.1 173 62.4
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 5.0e-49 198.4 177 62.1
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 6.5e-49 198.0 168 61.3
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 8.5e-49 197.6 194 55.7
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 1.5e-48 196.8 167 59.9
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 1.9e-48 196.4 168 61.3
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 2.1e-47 193.0 168 62.5
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 2.1e-47 193.0 168 57.7
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 3.6e-47 192.2 171 62.6
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 3.6e-47 192.2 132 68.9
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.8e-46 189.9 179 55.3
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 2.3e-46 189.5 168 57.7
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 5.2e-46 188.3 165 60.6
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 1.5e-45 186.8 112 77.7
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 4.4e-45 185.3 168 58.9
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 9.8e-45 184.1 161 62.1
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 2.8e-44 182.6 113 77.0
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 6.3e-44 181.4 190 56.3
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 8.3e-44 181.0 113 75.2
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 4.1e-43 178.7 113 74.3
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 5.4e-43 178.3 170 58.2
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 7.0e-43 177.9 223 49.3
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 9.1e-43 177.6 169 57.4
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 3.5e-42 175.6 186 53.8
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 4.5e-42 175.3 113 72.6
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 7.7e-42 174.5 112 72.3
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 2.8e-39 166.0 118 66.9
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 3.6e-39 165.6 147 57.8
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 3.6e-39 165.6 168 53.6
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 8.9e-38 161.0 145 62.8
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 4.4e-37 158.7 145 62.1
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 6.4e-36 154.8 98 72.4
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 2.4e-35 152.9 92 77.2
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 2.4e-35 152.9 110 63.6
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 2.0e-34 149.8 92 76.1
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 3.0e-33 146.0 102 72.5
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 1.5e-32 143.7 130 54.6
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 7.3e-32 141.4 113 66.4
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 4.7e-31 138.7 92 70.7
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 3.4e-29 132.5 100 58.0
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 1.4e-27 127.1 126 61.1
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 3.2e-27 125.9 89 62.9
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 8.6e-25 117.9 97 53.6
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 2.5e-24 116.3 70 72.9
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 2.5e-24 116.3 70 72.9
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 7.3e-24 114.8 101 49.5
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 8.1e-23 111.3 97 49.5
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 1.8e-22 110.2 108 48.1
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 5.8e-21 105.1 81 58.0
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 4.6e-18 95.5 92 52.2


User provided reference genes

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