Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0411 Ceratophyllum demersum HOM05D002446 ORTHO05D130345 5.2e-34 147.1 73 100.0
CDE10G0662 Ceratophyllum demersum HOM05D002446 ORTHO05D002941 5.4e-15 84.0 48 85.4
AUR62029202 Chenopodium quinoa HOM05D002446 ORTHO05D002941 1.7e-13 79.0 48 75.0
QL01p015626 Quercus lobata HOM05D002446 ORTHO05D002941 3.9e-13 77.8 48 75.0
AL4G22060 Arabidopsis lyrata HOM05D002446 ORTHO05D002941 5.0e-13 77.4 48 75.0
Aqoxy2G01739 Aquilegia oxysepala HOM05D002446 ORTHO05D002941 8.6e-13 76.6 63 63.5
AT2G28100 Arabidopsis thaliana HOM05D002446 ORTHO05D002941 8.6e-13 76.6 48 75.0
EL10Ac9g22590 Beta vulgaris HOM05D002446 ORTHO05D002941 1.1e-12 76.3 48 70.8
CiPaw.13G124800 Carya illinoinensis HOM05D002446 ORTHO05D002941 1.1e-12 76.3 48 72.9
AUR62014939 Chenopodium quinoa HOM05D002446 ORTHO05D002941 1.5e-12 75.9 48 70.8
THA.LOC104826383 Tarenaya hassleriana HOM05D002446 ORTHO05D002941 1.5e-12 75.9 48 75.0
PSO339G6334 Papaver somniferum HOM05D002446 ORTHO05D002941 1.9e-12 75.5 48 72.9
Carub.0004s0887 Capsella rubella HOM05D002446 ORTHO05D002941 3.3e-12 74.7 48 72.9
CARHR120860 Cardamine hirsuta HOM05D002446 ORTHO05D002941 3.3e-12 74.7 48 72.9
CsaV3_6G014260 Cucumis sativus L. HOM05D002446 ORTHO05D002941 3.3e-12 74.7 48 72.9
Prupe.6G109300 Prunus persica HOM05D002446 ORTHO05D002941 3.3e-12 74.7 48 72.9
Sed0004628 Sechium edule HOM05D002446 ORTHO05D002941 3.3e-12 74.7 48 72.9
TWI31G1393 Tripterygium wilfordii HOM05D002446 ORTHO05D002941 3.3e-12 74.7 48 72.9
Ciclev10028210m.g Citrus clementina HOM05D002446 ORTHO05D002941 4.3e-12 74.3 48 70.8
Oeu029890.1 Olea europaea HOM05D002446 ORTHO05D002941 4.3e-12 74.3 48 70.8
Sabra09G0004000 Salix brachista HOM05D002446 ORTHO05D002941 4.3e-12 74.3 48 70.8
ClCG02G021470 Citrullus lanatus HOM05D002446 ORTHO05D002941 5.6e-12 73.9 48 70.8
Sp4g10900 Schrenkiella parvula HOM05D002446 ORTHO05D002941 5.6e-12 73.9 48 72.9
Hund01470 Selenicereus undatus HOM05D002446 ORTHO05D002941 5.6e-12 73.9 48 70.8
Migut.D02281 Erythranthe guttata HOM05D002446 ORTHO05D002941 7.3e-12 73.6 48 70.8
Lsat_1_v5_gn_6_44060 Lactuca sativa HOM05D002446 ORTHO05D002941 7.3e-12 73.6 48 72.9
Ah.01g003200 Amaranthus hybridus HOM05D002446 ORTHO05D002941 9.5e-12 73.2 48 70.8
Cc01_g10480 Coffea canephora HOM05D002446 ORTHO05D002941 9.5e-12 73.2 48 72.9
COL.COLO4_11064 Corchorus olitorius HOM05D002446 ORTHO05D002941 9.5e-12 73.2 48 68.8
MELO3C026905.2 Cucumis melo HOM05D002446 ORTHO05D002941 9.5e-12 73.2 48 70.8
BcaB06g28187 Brassica carinata HOM05D002446 ORTHO05D002941 1.2e-11 72.8 48 70.8
ECA233G0707 Erigeron canadensis HOM05D002446 ORTHO05D002941 1.2e-11 72.8 48 72.9
Eucgr.J00367 Eucalyptus grandis HOM05D002446 ORTHO05D002941 1.2e-11 72.8 48 70.8
Eucgr.J00379 Eucalyptus grandis HOM05D002446 ORTHO05D002941 1.2e-11 72.8 48 70.8
Thhalv10016468m.g Eutrema salsugineum HOM05D002446 ORTHO05D002941 1.2e-11 72.8 48 72.9
Gohir.A08G200300 Gossypium hirsutum HOM05D002446 ORTHO05D002941 1.2e-11 72.8 48 68.8
Gohir.D08G217500 Gossypium hirsutum HOM05D002446 ORTHO05D002941 1.2e-11 72.8 48 68.8
Gorai.004G231200 Gossypium raimondii HOM05D002446 ORTHO05D002941 1.2e-11 72.8 48 68.8
HanXRQChr10g0313301 Helianthus annuus HOM05D002446 ORTHO05D002941 1.2e-11 72.8 48 72.9
MBI19_g35849_MAGBIO Magnolia biondii HOM05D002446 ORTHO05D002941 1.2e-11 72.8 48 68.8
MD00G1032500 Malus domestica HOM05D002446 ORTHO05D002941 1.2e-11 72.8 48 72.9
TAR633G0467 Trochodendron aralioides HOM05D002446 ORTHO05D002941 1.2e-11 72.8 48 70.8
arahy.Tifrunner.gnm1.ann1.KSB81E Arachis hypogaea HOM05D002446 ORTHO05D002941 1.6e-11 72.4 48 68.8
arahy.Tifrunner.gnm1.ann1.XALJ0Y Arachis hypogaea HOM05D002446 ORTHO05D002941 1.6e-11 72.4 48 68.8
BcaC02g08208 Brassica carinata HOM05D002446 ORTHO05D002941 1.6e-11 72.4 48 70.8
A04p21330 Brassica napus HOM05D002446 ORTHO05D002941 1.6e-11 72.4 48 70.8
C04p57250 Brassica napus HOM05D002446 ORTHO05D002941 1.6e-11 72.4 48 70.8
BolC4t27251H Brassica oleracea HOM05D002446 ORTHO05D002941 1.6e-11 72.4 48 70.8
BraA04t17699Z Brassica rapa HOM05D002446 ORTHO05D002941 1.6e-11 72.4 48 70.8
Lalb_Chr14g0374471 Lupinus albus HOM05D002446 ORTHO05D002941 1.6e-11 72.4 48 70.8
Potri.009G006900 Populus trichocarpa HOM05D002446 ORTHO05D002941 1.6e-11 72.4 48 70.8
ATR0680G222 Amborella trichopoda HOM05D002446 ORTHO05D002941 2.8e-11 71.6 48 70.8
Cfa010305 Carpinus fangiana HOM05D002446 ORTHO05D002941 2.8e-11 71.6 48 68.8
Haze_23730 Corylus avellana HOM05D002446 ORTHO05D002941 2.8e-11 71.6 48 68.8
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 3.6e-11 71.2 48 70.8
DCAR_018779 Daucus carota HOM05D002446 ORTHO05D002941 3.6e-11 71.2 48 70.8
Hma1.2p1_0051F.1_g029290 Hydrangea macrophylla HOM05D002446 ORTHO05D002941 3.6e-11 71.2 48 68.8
Oeu018478.1 Olea europaea HOM05D002446 ORTHO05D002941 3.6e-11 71.2 48 70.8
RcHm_v2.0_Chr5g0057471 Rosa chinensis HOM05D002446 ORTHO05D002941 3.6e-11 71.2 48 70.8
TPR.G11628 Trifolium pratense HOM05D002446 ORTHO05D002941 4.7e-11 70.9 48 64.6
FvH4_3g30940 Fragaria vesca HOM05D002446 ORTHO05D002941 6.1e-11 70.5 48 70.8
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 6.1e-11 70.5 48 70.8
FAN25G2647 Fragaria x ananassa HOM05D002446 ORTHO05D002941 6.1e-11 70.5 48 70.8
Medtr2g095700 Medicago truncatula HOM05D002446 ORTHO05D002941 6.1e-11 70.5 48 68.8
GSVIVG01031495001 Vitis vinifera HOM05D002446 ORTHO05D002941 8.0e-11 70.1 48 68.8
FAN16G1400 Fragaria x ananassa HOM05D002446 ORTHO05D002941 1.0e-10 69.7 48 70.8
Duzib168G0452 Durio zibethinus HOM05D002446 ORTHO05D002941 1.4e-10 69.3 48 64.6
PGR119G2270 Punica granatum HOM05D002446 ORTHO05D002941 1.4e-10 69.3 48 66.7
Rhsim13G0099400 Rhododendron simsii HOM05D002446 ORTHO05D002941 1.4e-10 69.3 48 66.7
Nitab4.5_0011893g0010 Nicotiana tabacum HOM05D002446 ORTHO05D002941 2.3e-10 68.6 48 66.7
Sc21g0007230 Simmondsia chinensis HOM05D002446 ORTHO05D002941 2.3e-10 68.6 48 64.6
SGA_v2.0_scaffold1625G54002 Striga asiatica HOM05D002446 ORTHO05D002941 2.3e-10 68.6 48 70.8
SGA_v2.0_scaffold263G45966 Striga asiatica HOM05D002446 ORTHO05D002941 2.3e-10 68.6 48 70.8
ATR0680G102 Amborella trichopoda HOM05D002446 ORTHO05D002941 3.1e-10 68.2 48 66.7
Lj2A1012T37 Lonicera japonica HOM05D002446 ORTHO05D002941 3.1e-10 68.2 48 68.8
Nitab4.5_0000329g0260 Nicotiana tabacum HOM05D002446 ORTHO05D002941 3.1e-10 68.2 48 66.7
Solyc11g069010.2 Solanum lycopersicum HOM05D002446 ORTHO05D002941 3.1e-10 68.2 48 68.8
Sopen11g027720 Solanum pennellii HOM05D002446 ORTHO05D002941 3.1e-10 68.2 48 68.8
vmacro03266 Vaccinium macrocarpon HOM05D002446 ORTHO05D002941 3.1e-10 68.2 48 64.6
Actinidia24135 Actinidia chinensis HOM05D002446 ORTHO05D002941 4.0e-10 67.8 48 66.7
CSS0041005 Camellia sinensis var. sinensis HOM05D002446 ORTHO05D002941 4.0e-10 67.8 48 66.7
CSS0045964 Camellia sinensis var. sinensis HOM05D002446 ORTHO05D002941 4.0e-10 67.8 48 66.7
Lj3g0002991 Lotus japonicus HOM05D002446 ORTHO05D002941 4.0e-10 67.8 48 64.6
Peaxi162Scf00892g00124 Petunia axillaris HOM05D002446 ORTHO05D002941 4.0e-10 67.8 48 66.7
PGSC0003DMG400019638 Solanum tuberosum HOM05D002446 ORTHO05D002941 4.0e-10 67.8 48 66.7
Dinv29363 Davidia involucrata HOM05D002446 ORTHO05D002941 5.2e-10 67.4 49 69.4
SEGI_04257 Sequoiadendron giganteum HOM05D002446 ORTHO05D002941 5.2e-10 67.4 48 62.5
CANSAT80G1262 Cannabis sativa HOM05D002446 ORTHO05D002941 6.8e-10 67.0 48 64.6
CANSAT80G1316 Cannabis sativa HOM05D002446 ORTHO05D002941 6.8e-10 67.0 48 64.6
CANSAT80G1879 Cannabis sativa HOM05D002446 ORTHO05D002941 6.8e-10 67.0 48 64.6
CAN.G546.18 Capsicum annuum HOM05D002446 ORTHO05D002941 6.8e-10 67.0 48 68.8
Cpa.g.sc65.36 Carica papaya HOM05D002446 ORTHO05D002941 6.8e-10 67.0 48 66.7
SalBow3G4404 Salvia bowleyana HOM05D002446 ORTHO05D002941 6.8e-10 67.0 48 68.8
Lj2A1013T24 Lonicera japonica HOM05D002446 ORTHO05D002941 1.5e-09 65.9 48 66.7
unitig_0.g1500 Utricularia gibba HOM05D002446 ORTHO05D002941 2.6e-09 65.1 48 62.5
Manes.04G014700 Manihot esculenta HOM05D002446 ORTHO05D002941 3.4e-09 64.7 48 66.7
Ca_01373_v3 Cicer arietinum L. HOM05D002446 ORTHO05D002941 5.8e-09 63.9 48 64.6
Glyma.13G322800 Glycine max HOM05D002446 ORTHO05D002941 1.3e-08 62.8 48 60.4
Thecc.09G349400 Theobroma cacao HOM05D002446 ORTHO05D002941 1.7e-08 62.4 48 60.4
Thecc.09G349200 Theobroma cacao HOM05D002446 ORTHO05D002941 2.2e-08 62.0 48 58.3
arahy.Tifrunner.gnm1.ann1.BS651N Arachis hypogaea HOM05D002446 ORTHO05D023759 2.9e-08 61.6 41 65.9
Os04g0560400 Oryza sativa ssp. japonica HOM05D002446 ORTHO05D002941 3.7e-08 61.2 48 64.6
Phvul.005G131200 Phaseolus vulgaris HOM05D002446 ORTHO05D002941 3.7e-08 61.2 63 54.0
ATR0723G074 Amborella trichopoda HOM05D002446 ORTHO05D002941 6.4e-08 60.5 48 62.5
arahy.Tifrunner.gnm1.ann1.JQQ4L1 Arachis hypogaea HOM05D002446 ORTHO05D001054 1.1e-07 59.7 41 65.9
VMungo1080G0537 Vigna mungo HOM05D002446 ORTHO05D002941 1.4e-07 59.3 63 54.0
Psat5g281200 Pisum sativum HOM05D002446 ORTHO05D002941 5.4e-07 57.4 48 60.4
COL.COLO4_11063 Corchorus olitorius HOM05D002446 ORTHO05D002941 9.2e-07 56.6 48 56.2
HPP92_022581 Vanilla planifolia HOM05D002446 ORTHO05D002941 9.2e-07 56.6 48 62.5
Mapoly0037s0106 Marchantia polymorpha HOM05D002446 ORTHO05D002941 1.6e-06 55.8 48 54.2
SMO200G0089 Selaginella moellendorffii HOM05D002446 ORTHO05D002941 2.0e-06 55.5 48 56.2
SMO338G0027 Selaginella moellendorffii HOM05D002446 ORTHO05D002941 2.0e-06 55.5 48 56.2


User provided reference genes

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