Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0400 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 1.6e-246 855.5 401 100.0
CANSAT64G1787 Cannabis sativa HOM05D005523 ORTHO05D007089 1.5e-74 284.3 347 42.1
PSO478G5042 Papaver somniferum HOM05D005523 ORTHO05D007089 5.7e-74 282.3 344 45.3
PSO017G3752 Papaver somniferum HOM05D005523 ORTHO05D007089 1.3e-73 281.2 344 45.1
Ciclev10033727m.g Citrus clementina HOM05D005523 ORTHO05D007089 2.1e-73 280.4 376 42.6
Cfa008872 Carpinus fangiana HOM05D005523 ORTHO05D007089 5.3e-72 275.8 355 45.9
arahy.Tifrunner.gnm1.ann1.5T11RT Arachis hypogaea HOM05D005523 ORTHO05D007089 3.4e-71 273.1 348 44.8
arahy.Tifrunner.gnm1.ann1.1A68HA Arachis hypogaea HOM05D005523 ORTHO05D007089 5.9e-71 272.3 380 42.6
Rhsim09G0126700 Rhododendron simsii HOM05D005523 ORTHO05D007089 7.6e-71 271.9 349 44.7
Medtr4g083180 Medicago truncatula HOM05D005523 ORTHO05D007089 2.2e-70 270.4 351 45.6
Rhsim02G0238300 Rhododendron simsii HOM05D005523 ORTHO05D007089 2.2e-70 270.4 359 43.2
Psat7g133840 Pisum sativum HOM05D005523 ORTHO05D007089 1.1e-69 268.1 381 42.3
Nn4g23450 Nelumbo nucifera HOM05D005523 ORTHO05D007089 1.4e-69 267.7 359 42.9
Glyma.20G025400 Glycine max HOM05D005523 ORTHO05D007089 1.9e-69 267.3 345 44.3
COL.COLO4_27873 Corchorus olitorius HOM05D005523 ORTHO05D007089 3.2e-69 266.5 347 43.2
GSVIVG01012228001 Vitis vinifera HOM05D005523 ORTHO05D007089 3.2e-69 266.5 343 43.1
TWI79G0260 Tripterygium wilfordii HOM05D005523 ORTHO05D007089 5.5e-69 265.8 347 42.7
Ca_18798_v3 Cicer arietinum L. HOM05D005523 ORTHO05D007089 9.3e-69 265.0 329 44.4
QL03p074443 Quercus lobata HOM05D005523 ORTHO05D007089 1.2e-68 264.6 404 40.3
Haze_11899 Corylus avellana HOM05D005523 ORTHO05D007089 2.1e-68 263.8 306 48.4
QL03p074024 Quercus lobata HOM05D005523 ORTHO05D007089 7.9e-68 261.9 404 40.1
Thecc.02G329500 Theobroma cacao HOM05D005523 ORTHO05D007089 7.9e-68 261.9 375 41.3
PGSC0003DMG400028314 Solanum tuberosum HOM05D005523 ORTHO05D007089 1.8e-67 260.8 351 43.0
vmacro10430 Vaccinium macrocarpon HOM05D005523 ORTHO05D007089 2.3e-67 260.4 362 42.5
VMungo0251G1186 Vigna mungo HOM05D005523 ORTHO05D007089 3.0e-67 260.0 354 43.8
Gohir.D12G164000 Gossypium hirsutum HOM05D005523 ORTHO05D007089 6.7e-67 258.8 343 43.1
ATR0177G042 Amborella trichopoda HOM05D005523 ORTHO05D007089 1.5e-66 257.7 423 39.2
Aqoxy3G00520 Aquilegia oxysepala HOM05D005523 ORTHO05D007089 1.5e-66 257.7 364 40.1
Peaxi162Scf00175g00035 Petunia axillaris HOM05D005523 ORTHO05D007089 1.5e-66 257.7 372 43.3
Lj4g0005251 Lotus japonicus HOM05D005523 ORTHO05D007089 2.5e-66 256.9 347 42.9
Duzib251G0966 Durio zibethinus HOM05D005523 ORTHO05D007089 3.3e-66 256.5 348 44.0
Gorai.008G176600 Gossypium raimondii HOM05D005523 ORTHO05D007089 5.7e-66 255.8 343 42.6
Lsat_1_v5_gn_4_11761 Lactuca sativa HOM05D005523 ORTHO05D007089 5.7e-66 255.8 368 39.1
Sed0024899 Sechium edule HOM05D005523 ORTHO05D007089 7.4e-66 255.4 388 39.7
Sc14g0007970 Simmondsia chinensis HOM05D005523 ORTHO05D007089 1.3e-65 254.6 364 40.9
EL10Ac6g15006 Beta vulgaris HOM05D005523 ORTHO05D007089 2.2e-65 253.8 359 39.3
CAN.G707.6 Capsicum annuum HOM05D005523 ORTHO05D007089 2.8e-65 253.4 382 42.1
Cc11_g11910 Coffea canephora HOM05D005523 ORTHO05D007089 2.8e-65 253.4 353 40.8
Phvul.002G101900 Phaseolus vulgaris HOM05D005523 ORTHO05D007089 4.8e-65 252.7 352 42.0
MD13G1061700 Malus domestica HOM05D005523 ORTHO05D007089 6.3e-65 252.3 355 40.3
Potri.010G157700 Populus trichocarpa HOM05D005523 ORTHO05D007089 6.3e-65 252.3 349 42.1
Solyc05g012200.3 Solanum lycopersicum HOM05D005523 ORTHO05D007089 6.3e-65 252.3 348 42.5
MBI19_g25293_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 1.4e-64 251.1 429 38.5
Lalb_Chr05g0219911 Lupinus albus HOM05D005523 ORTHO05D007089 5.3e-64 249.2 383 39.4
Nitab4.5_0007061g0020 Nicotiana tabacum HOM05D005523 ORTHO05D007089 5.3e-64 249.2 354 41.8
RcHm_v2.0_Chr4g0438141 Rosa chinensis HOM05D005523 ORTHO05D007089 9.1e-64 248.4 365 39.5
SGA_v2.0_scaffold16G07795 Striga asiatica HOM05D005523 ORTHO05D007089 1.2e-63 248.1 348 42.5
HanXRQChr17g0552771 Helianthus annuus HOM05D005523 ORTHO05D007089 2.0e-63 247.3 342 40.6
MD16G1060200 Malus domestica HOM05D005523 ORTHO05D007089 5.9e-63 245.7 358 40.8
Nitab4.5_0000231g0170 Nicotiana tabacum HOM05D005523 ORTHO05D007089 7.7e-63 245.4 353 42.8
Migut.L01183 Erythranthe guttata HOM05D005523 ORTHO05D007089 1.0e-62 245.0 353 40.5
CiPaw.05G124500 Carya illinoinensis HOM05D005523 ORTHO05D007089 1.7e-62 244.2 361 41.0
Aa31LG2G7010 Aethionema arabicum HOM05D005523 ORTHO05D007089 2.2e-62 243.8 323 41.5
CsaV3_5G033360 Cucumis sativus L. HOM05D005523 ORTHO05D007089 6.5e-62 242.3 359 39.3
TPR.G34024 Trifolium pratense HOM05D005523 ORTHO05D007089 6.5e-62 242.3 345 41.7
Lj6A778G61 Lonicera japonica HOM05D005523 ORTHO05D007089 8.5e-62 241.9 423 35.9
MELO3C012156.2 Cucumis melo HOM05D005523 ORTHO05D007089 1.4e-61 241.1 362 38.4
DCAR_026677 Daucus carota HOM05D005523 ORTHO05D007089 3.2e-61 240.0 323 41.8
ECA234G2689 Erigeron canadensis HOM05D005523 ORTHO05D007089 4.2e-61 239.6 348 39.1
FAN12G2921 Fragaria x ananassa HOM05D005523 ORTHO05D007089 4.2e-61 239.6 363 38.8
Atru.chr11.1618 Acer truncatum HOM05D005523 ORTHO05D007089 9.4e-61 238.4 347 40.9
FvH4_4g29880 Fragaria vesca HOM05D005523 ORTHO05D007089 9.4e-61 238.4 363 38.6
FAN17G1793 Fragaria x ananassa HOM05D005523 ORTHO05D007089 9.4e-61 238.4 372 37.9
Manes.05G109800 Manihot esculenta HOM05D005523 ORTHO05D007089 1.2e-60 238.0 348 40.8
Oeu021803.1 Olea europaea HOM05D005523 ORTHO05D007089 1.2e-60 238.0 378 37.8
Oeu021804.1 Olea europaea HOM05D005523 ORTHO05D007089 1.2e-60 238.0 378 37.8
Prupe.1G288300 Prunus persica HOM05D005523 ORTHO05D007089 1.2e-60 238.0 351 40.7
SalBow2G2481 Salvia bowleyana HOM05D005523 ORTHO05D007089 2.7e-60 236.9 349 41.3
FAN07G2138 Fragaria x ananassa HOM05D005523 ORTHO05D007089 1.0e-59 235.0 367 38.7
FAN22G0589 Fragaria x ananassa HOM05D005523 ORTHO05D007089 2.3e-59 233.8 365 37.5
AL5G13440 Arabidopsis lyrata HOM05D005523 ORTHO05D007089 3.9e-59 233.0 373 38.1
Carub.0005s0279 Capsella rubella HOM05D005523 ORTHO05D007089 3.9e-59 233.0 345 40.9
Sopen05g007030 Solanum pennellii HOM05D005523 ORTHO05D007089 5.1e-59 232.6 224 53.6
CARHR145990 Cardamine hirsuta HOM05D005523 ORTHO05D007089 8.8e-59 231.9 351 39.0
AUR62007908 Chenopodium quinoa HOM05D005523 ORTHO05D007089 2.6e-58 230.3 334 40.1
Thhalv10003838m.g Eutrema salsugineum HOM05D005523 ORTHO05D007089 2.6e-58 230.3 373 38.1
AT2G03667 Arabidopsis thaliana HOM05D005523 ORTHO05D007089 3.3e-58 229.9 372 38.4
C07p34020 Brassica napus HOM05D005523 ORTHO05D007089 5.7e-58 229.2 371 37.2
BolC7t43916H Brassica oleracea HOM05D005523 ORTHO05D007089 9.7e-58 228.4 371 37.2
AUR62003091 Chenopodium quinoa HOM05D005523 ORTHO05D007089 1.3e-57 228.0 336 40.5
HPP92_001825 Vanilla planifolia HOM05D005523 ORTHO05D007089 2.2e-57 227.3 295 42.4
THA.LOC104805203 Tarenaya hassleriana HOM05D005523 ORTHO05D007089 8.2e-57 225.3 344 38.7
A06p43010 Brassica napus HOM05D005523 ORTHO05D007089 1.1e-56 224.9 360 37.5
Sp2g14490 Schrenkiella parvula HOM05D005523 ORTHO05D007089 2.6e-55 220.3 380 35.8
Hund25171 Selenicereus undatus HOM05D005523 ORTHO05D007089 3.4e-55 219.9 383 38.9
BcaB07g30661 Brassica carinata HOM05D005523 ORTHO05D007089 2.9e-54 216.9 346 38.2
Cc03_g11190 Coffea canephora HOM05D005523 ORTHO05D007089 2.1e-52 210.7 203 49.8
Pp3c13_5080 Physcomitrium patens HOM05D005523 ORTHO05D007089 1.3e-49 201.4 358 36.3
PGR119G1690 Punica granatum HOM05D005523 ORTHO05D007089 3.7e-49 199.9 260 45.8
AagrBONN_evm.TU.Sc2ySwM_228.676 Anthoceros agrestis HOM05D005523 ORTHO05D007089 3.8e-46 189.9 370 36.2
ClCG05G023660 Citrullus lanatus HOM05D005523 ORTHO05D007089 8.0e-44 182.2 403 31.0
SMO364G0955 Selaginella moellendorffii HOM05D005523 ORTHO05D007089 1.3e-41 174.9 292 36.0
Zm00001eb029510 Zea mays HOM05D005523 ORTHO05D007089 2.8e-41 173.7 240 40.4
Cpa.g.sc1.132 Carica papaya HOM05D005523 ORTHO05D007089 6.1e-36 156.0 232 42.2
TAR374G1311 Trochodendron aralioides HOM05D005523 ORTHO05D007089 6.3e-33 146.0 225 41.8
unitig_26.g10286 Utricularia gibba HOM05D005523 ORTHO05D007089 9.1e-32 142.1 189 42.3
CSS0024141 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 4.5e-31 139.8 110 60.9
CBR_g50115 Chara braunii HOM05D005523 ORTHO05D007089 1.3e-30 138.3 142 45.8
CSS0004547 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 8.6e-30 135.6 110 60.9
Os12g0574900 Oryza sativa ssp. japonica HOM05D005523 ORTHO05D007089 7.2e-29 132.5 233 36.9
SEGI_10872 Sequoiadendron giganteum HOM05D005523 ORTHO05D007089 2.0e-26 124.4 96 61.5
CSS0023178 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 5.7e-26 122.9 110 54.5
Eucgr.G02442 Eucalyptus grandis HOM05D005523 ORTHO05D007089 3.1e-24 117.1 136 44.9
CSS0028074 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D026295 1.2e-18 98.6 110 46.4
Cre07.g321050 Chlamydomonas reinhardtii HOM05D005523 ORTHO05D007089 5.9e-15 86.3 98 41.8
PRCOL_00003408 Prasinoderma coloniale HOM05D005523 ORTHO05D007089 1.0e-14 85.5 154 31.8
Mapoly0013s0146 Marchantia polymorpha HOM05D005523 ORTHO05D007089 1.3e-14 85.1 174 30.5
MBI19_g26864_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 4.3e-13 80.1 208 33.2
EL10Ac6g15009 Beta vulgaris HOM05D005523 ORTHO05D007089 1.2e-12 78.6 220 27.7
Actinidia12916 Actinidia chinensis HOM05D005523 ORTHO05D007089 2.3e-11 74.3 270 26.7
HanXRQChr15g0470871 Helianthus annuus HOM05D005523 ORTHO05D007089 3.1e-11 73.9 85 43.5
CAN.G553.8 Capsicum annuum HOM05D001766 ORTHO05D043404 1.5e-10 71.6 116 37.9
CSS0034602 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 3.2e-08 63.9 58 48.3
TAR374G1461 Trochodendron aralioides HOM05D005523 ORTHO05D007089 4.6e-07 60.1 82 30.5
CiPaw.04G124200 Carya illinoinensis HOM05D005523 ORTHO05D007089 2.3e-06 57.8 72 44.4


User provided reference genes

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