Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 1.3e-42 176.0 90 100.0
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 1.2e-16 89.7 90 58.9
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 1.9e-14 82.4 83 56.6
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 9.6e-14 80.1 75 61.3
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 1.2e-13 79.7 82 57.3
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 1.2e-13 79.7 86 54.7
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 1.2e-13 79.7 78 56.4
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.6e-13 79.3 78 57.7
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 2.1e-13 79.0 78 56.4
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 8.1e-13 77.0 81 50.6
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 1.1e-12 76.6 87 55.2
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.4e-12 76.3 78 56.4
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 1.4e-12 76.3 78 57.7
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 1.8e-12 75.9 78 56.4
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 2.4e-12 75.5 78 57.7
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 5.3e-12 74.3 75 56.0
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 5.3e-12 74.3 78 55.1
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 6.9e-12 73.9 78 53.8
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 6.9e-12 73.9 81 50.6
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 6.9e-12 73.9 86 54.7
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 9.0e-12 73.6 85 50.6
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 9.0e-12 73.6 78 55.1
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 9.0e-12 73.6 78 55.1
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 1.2e-11 73.2 80 57.5
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 1.2e-11 73.2 78 52.6
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 1.5e-11 72.8 79 58.2
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 1.5e-11 72.8 80 58.8
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 1.5e-11 72.8 78 56.4
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 2.0e-11 72.4 80 57.5
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 2.0e-11 72.4 78 52.6
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 2.6e-11 72.0 79 48.1
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 2.6e-11 72.0 81 51.9
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 3.4e-11 71.6 85 52.9
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 3.4e-11 71.6 81 50.6
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 3.4e-11 71.6 79 51.9
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 4.4e-11 71.2 87 51.7
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 9.9e-11 70.1 49 69.4
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 9.9e-11 70.1 78 51.3
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 9.9e-11 70.1 84 52.4
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 1.7e-10 69.3 87 44.8
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 1.7e-10 69.3 87 43.7
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.7e-10 69.3 81 51.9
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 2.9e-10 68.6 78 52.6
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 3.8e-10 68.2 80 47.5
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 4.9e-10 67.8 80 53.8
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 4.9e-10 67.8 80 53.8
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 1.1e-09 66.6 78 48.7
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 1.1e-09 66.6 81 51.9
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.4e-09 66.2 78 50.0
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 1.9e-09 65.9 78 51.3
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 4.2e-09 64.7 83 47.0
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 5.4e-09 64.3 78 48.7
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 5.4e-09 64.3 38 73.7
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 7.1e-09 63.9 77 51.9
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 7.1e-09 63.9 37 75.7
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 9.3e-09 63.5 46 63.0
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 1.2e-08 63.2 78 50.0
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 1.2e-08 63.2 34 79.4
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 1.2e-08 63.2 80 47.5
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 1.6e-08 62.8 75 49.3
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 2.1e-08 62.4 78 50.0
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.1e-08 62.4 77 48.1
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 2.1e-08 62.4 79 45.6
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 2.1e-08 62.4 80 42.5
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 2.1e-08 62.4 78 52.6
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 2.7e-08 62.0 81 44.4
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 3.5e-08 61.6 78 48.7
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 6.0e-08 60.8 78 47.4
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.0e-07 60.1 77 46.8
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 1.7e-07 59.3 78 47.4
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 1.7e-07 59.3 78 47.4
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 1.7e-07 59.3 78 47.4
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 2.3e-07 58.9 78 50.0
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 3.0e-07 58.5 78 47.4
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 3.0e-07 58.5 78 47.4
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 5.1e-07 57.8 77 41.6
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 8.7e-07 57.0 80 41.2
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 5.6e-06 54.3 78 43.6


User provided reference genes

Program Settings