Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 1.6e-97 359.4 178 100.0
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 3.7e-49 198.7 187 61.5
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 4.8e-49 198.4 185 60.0
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 5.3e-48 194.9 181 59.7
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 6.9e-48 194.5 183 62.3
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 9.0e-48 194.1 185 58.9
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 1.2e-47 193.7 183 60.1
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 1.5e-47 193.4 188 61.2
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 1.5e-47 193.4 183 60.1
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 2.0e-47 193.0 187 59.4
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 2.6e-47 192.6 184 59.8
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 7.6e-47 191.0 187 59.4
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 7.6e-47 191.0 187 59.9
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 9.9e-47 190.7 187 61.0
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 2.2e-46 189.5 187 59.9
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 2.2e-46 189.5 187 58.8
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 2.2e-46 189.5 179 59.2
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 2.9e-46 189.1 200 55.0
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 3.8e-46 188.7 189 57.7
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 4.9e-46 188.3 191 56.5
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 6.4e-46 188.0 188 59.0
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 6.4e-46 188.0 185 56.8
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 6.4e-46 188.0 184 58.7
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 6.4e-46 188.0 184 58.7
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 8.4e-46 187.6 185 56.8
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 8.4e-46 187.6 189 60.3
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 1.1e-45 187.2 193 54.9
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.4e-45 186.8 184 59.8
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 1.9e-45 186.4 183 57.9
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.9e-45 186.4 187 59.9
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.9e-45 186.4 187 59.9
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 2.4e-45 186.0 187 58.3
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 3.2e-45 185.7 186 58.6
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 4.2e-45 185.3 189 56.6
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 5.5e-45 184.9 183 56.8
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 7.1e-45 184.5 184 58.7
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 7.1e-45 184.5 187 57.2
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 7.1e-45 184.5 187 57.2
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 9.3e-45 184.1 178 59.6
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 9.3e-45 184.1 183 56.8
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 9.3e-45 184.1 183 56.8
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 1.2e-44 183.7 185 55.7
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 1.2e-44 183.7 183 56.8
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 1.2e-44 183.7 182 57.7
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 2.1e-44 183.0 182 58.8
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 3.5e-44 182.2 187 56.1
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 3.5e-44 182.2 187 56.7
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 4.6e-44 181.8 187 56.7
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 4.6e-44 181.8 187 56.1
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 6.0e-44 181.4 202 52.5
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 7.9e-44 181.0 179 58.1
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 7.9e-44 181.0 183 57.4
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 1.0e-43 180.6 190 56.8
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 1.0e-43 180.6 185 55.1
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.3e-43 180.3 184 56.5
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.8e-43 179.9 190 56.8
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.8e-43 179.9 190 56.8
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 1.8e-43 179.9 187 55.6
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 2.3e-43 179.5 187 57.2
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 3.0e-43 179.1 186 54.8
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 5.1e-43 178.3 219 50.7
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 6.7e-43 177.9 182 59.3
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 1.1e-42 177.2 186 54.3
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 1.5e-42 176.8 183 54.1
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 1.5e-42 176.8 190 52.6
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.9e-42 176.4 186 54.3
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 4.3e-42 175.3 190 56.8
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 7.4e-42 174.5 183 56.3
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 9.6e-42 174.1 186 54.8
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 1.6e-41 173.3 188 57.4
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 1.6e-41 173.3 183 53.0
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 2.8e-41 172.6 172 56.4
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 2.8e-41 172.6 234 47.4
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 4.8e-41 171.8 187 55.1
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 1.1e-40 170.6 183 53.6
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 1.1e-40 170.6 183 50.8
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 1.4e-40 170.2 184 53.3
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.8e-40 169.9 234 47.0
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 2.4e-40 169.5 187 56.7
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 5.3e-40 168.3 187 52.4
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 6.9e-40 167.9 187 52.4
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.2e-39 167.2 183 51.4
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 1.2e-39 167.2 181 55.8
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 1.5e-39 166.8 187 51.9
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 1.7e-38 163.3 235 48.1
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 2.2e-38 162.9 178 54.5
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.9e-38 162.5 185 50.3
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 4.9e-38 161.8 187 51.3
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 9.3e-37 157.5 182 51.6
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 1.5e-34 150.2 133 59.4
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 5.7e-34 148.3 144 57.6
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 4.1e-32 142.1 186 48.4
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 2.0e-31 139.8 182 48.9
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 1.7e-30 136.7 185 44.9
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 1.4e-29 133.7 174 47.1
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 4.2e-29 132.1 185 45.4
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 5.7e-26 121.7 105 63.8
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 2.8e-25 119.4 169 46.2
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 3.7e-25 119.0 94 64.9
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.4e-24 117.1 105 61.9
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 3.1e-24 115.9 145 49.7
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 6.9e-24 114.8 105 60.0
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.4e-21 107.1 105 56.2
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 3.2e-21 105.9 205 35.6
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 7.9e-20 101.3 158 36.1
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.0e-19 100.9 202 36.6
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 1.4e-19 100.5 94 55.3
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 6.7e-19 98.2 145 39.3
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 3.3e-18 95.9 178 38.8
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 1.7e-17 93.6 170 38.2
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 6.5e-14 81.6 92 47.8
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 8.5e-14 81.3 53 73.6
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 8.5e-14 81.3 50 74.0
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 2.1e-12 76.6 50 68.0
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.0e-11 74.3 110 48.2
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 3.3e-10 69.3 82 52.4
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 2.2e-09 66.6 201 27.9


User provided reference genes

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