Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0299 Ceratophyllum demersum HOM05D005007 ORTHO05D006053 8.9e-50 199.9 97 100.0
CDE10G1215 Ceratophyllum demersum HOM05D005007 ORTHO05D006053 1.3e-21 106.3 54 92.6
MBI06_g18688_MAGBIO Magnolia biondii HOM05D005007 ORTHO05D006053 7.4e-20 100.5 79 59.5
Dinv12754 Davidia involucrata HOM05D005007 ORTHO05D006053 6.2e-19 97.4 94 52.1
Actinidia35601 Actinidia chinensis HOM05D005007 ORTHO05D006053 2.4e-18 95.5 94 52.1
GSVIVG01021255001 Vitis vinifera HOM05D005007 ORTHO05D006053 2.4e-18 95.5 88 55.7
Thecc.07G118400 Theobroma cacao HOM05D005007 ORTHO05D006053 4.0e-18 94.7 87 50.6
Dinv32340 Davidia involucrata HOM05D005007 ORTHO05D006053 1.5e-17 92.8 86 51.2
Lalb_Chr03g0031211 Lupinus albus HOM05D005007 ORTHO05D006053 2.6e-17 92.0 97 48.5
Manes.15G095801 Manihot esculenta HOM05D005007 ORTHO05D006053 3.4e-17 91.7 91 48.4
TWI09G0208 Tripterygium wilfordii HOM05D005007 ORTHO05D006053 3.4e-17 91.7 104 48.1
Haze_05357 Corylus avellana HOM05D005007 ORTHO05D006053 4.5e-17 91.3 89 49.4
Medtr8g087320 Medicago truncatula HOM05D005007 ORTHO05D006053 5.8e-17 90.9 90 48.9
Lalb_Chr01g0006861 Lupinus albus HOM05D005007 ORTHO05D006053 7.6e-17 90.5 76 51.3
Haze_09314 Corylus avellana HOM05D005007 ORTHO05D006053 1.0e-16 90.1 83 49.4
Nn3g21105 Nelumbo nucifera HOM05D005007 ORTHO05D006053 1.0e-16 90.1 90 51.1
MD10G1275600 Malus domestica HOM05D005007 ORTHO05D006053 1.7e-16 89.4 85 51.8
Duzib192G0425 Durio zibethinus HOM05D005007 ORTHO05D006053 2.2e-16 89.0 87 48.3
Potri.011G070400 Populus trichocarpa HOM05D005007 ORTHO05D006053 2.2e-16 89.0 77 51.9
Thecc.06G165800 Theobroma cacao HOM05D005007 ORTHO05D006053 3.8e-16 88.2 90 50.0
COL.COLO4_31238 Corchorus olitorius HOM05D005007 ORTHO05D006053 8.4e-16 87.0 97 44.3
Prupe.4G066600 Prunus persica HOM05D005007 ORTHO05D006053 8.4e-16 87.0 79 51.9
MD00G1009400 Malus domestica HOM05D005007 ORTHO05D006053 1.1e-15 86.7 81 50.6
MD05G1295500 Malus domestica HOM05D005007 ORTHO05D006053 1.1e-15 86.7 81 50.6
QL05p049974 Quercus lobata HOM05D005007 ORTHO05D006053 1.1e-15 86.7 83 49.4
SalBow7G2341 Salvia bowleyana HOM05D005007 ORTHO05D006053 1.1e-15 86.7 87 48.3
Manes.16G043000 Manihot esculenta HOM05D005007 ORTHO05D006053 1.9e-15 85.9 79 54.4
Manes.17G059100 Manihot esculenta HOM05D005007 ORTHO05D006053 1.9e-15 85.9 81 54.3
PGR042G3787 Punica granatum HOM05D005007 ORTHO05D006053 1.9e-15 85.9 80 53.8
Actinidia39520 Actinidia chinensis HOM05D005007 ORTHO05D006053 3.2e-15 85.1 83 48.2
COL.COLO4_17528 Corchorus olitorius HOM05D005007 ORTHO05D006053 3.2e-15 85.1 88 50.0
Duzib160G0236 Durio zibethinus HOM05D005007 ORTHO05D006053 3.2e-15 85.1 77 50.6
Oeu060171.1 Olea europaea HOM05D005007 ORTHO05D006053 3.2e-15 85.1 85 50.6
Sed0017213 Sechium edule HOM05D005007 ORTHO05D006053 3.2e-15 85.1 85 50.6
Actinidia35210 Actinidia chinensis HOM05D005007 ORTHO05D006053 4.2e-15 84.7 66 57.6
Cpa.g.sc77.26 Carica papaya HOM05D005007 ORTHO05D006053 4.2e-15 84.7 78 51.3
Glyma.06G227850 Glycine max HOM05D005007 ORTHO05D006053 4.2e-15 84.7 96 44.8
Glyma.06G227900 Glycine max HOM05D005007 ORTHO05D006053 4.2e-15 84.7 96 44.8
Sabra04G0040400 Salix brachista HOM05D005007 ORTHO05D006053 4.2e-15 84.7 79 49.4
DCAR_003989 Daucus carota HOM05D005007 ORTHO05D006053 5.5e-15 84.3 90 47.8
Sabra11G0055100 Salix brachista HOM05D005007 ORTHO05D006053 5.5e-15 84.3 77 54.5
Gohir.A06G133600 Gossypium hirsutum HOM05D005007 ORTHO05D006053 7.1e-15 84.0 82 52.4
CiPaw.12G113100 Carya illinoinensis HOM05D005007 ORTHO05D006053 9.3e-15 83.6 84 47.6
Glyma.12G156400 Glycine max HOM05D005007 ORTHO05D006053 1.6e-14 82.8 82 48.8
Lalb_Chr13g0295281 Lupinus albus HOM05D005007 ORTHO05D006053 1.6e-14 82.8 87 48.3
Potri.004G061100 Populus trichocarpa HOM05D005007 ORTHO05D006053 1.6e-14 82.8 85 45.9
arahy.Tifrunner.gnm1.ann1.G1B0F8 Arachis hypogaea HOM05D005007 ORTHO05D006053 2.1e-14 82.4 85 47.1
CiPaw.09G137100 Carya illinoinensis HOM05D005007 ORTHO05D006053 2.1e-14 82.4 75 50.7
Gohir.D06G138700 Gossypium hirsutum HOM05D005007 ORTHO05D006053 2.1e-14 82.4 82 51.2
QL08p025919 Quercus lobata HOM05D005007 ORTHO05D006053 2.1e-14 82.4 61 60.7
ATR0012G015 Amborella trichopoda HOM05D005007 ORTHO05D006053 2.7e-14 82.0 89 49.4
Ciclev10017907m.g Citrus clementina HOM05D005007 ORTHO05D006053 2.7e-14 82.0 70 54.3
Gorai.010G161300 Gossypium raimondii HOM05D005007 ORTHO05D006053 2.7e-14 82.0 82 51.2
Ciclev10022947m.g Citrus clementina HOM05D005007 ORTHO05D006053 3.5e-14 81.6 75 52.0
Peaxi162Scf00202g00119 Petunia axillaris HOM05D005007 ORTHO05D006053 3.5e-14 81.6 84 51.2
VMungo1127G1862 Vigna mungo HOM05D005007 ORTHO05D006053 3.5e-14 81.6 77 50.6
Atru.chr10.1572 Acer truncatum HOM05D005007 ORTHO05D006053 4.6e-14 81.3 97 40.2
BcaB04g18501 Brassica carinata HOM05D005007 ORTHO05D006053 4.6e-14 81.3 88 46.6
Sabra11G0058300 Salix brachista HOM05D005007 ORTHO05D006053 4.6e-14 81.3 74 54.1
Phvul.011G165600 Phaseolus vulgaris HOM05D005007 ORTHO05D006053 6.0e-14 80.9 78 48.7
Aqoxy4G00249 Aquilegia oxysepala HOM05D005007 ORTHO05D006053 7.9e-14 80.5 83 54.2
Rhsim06G0209000 Rhododendron simsii HOM05D005007 ORTHO05D006053 7.9e-14 80.5 67 55.2
vmacro11948 Vaccinium macrocarpon HOM05D005007 ORTHO05D006053 7.9e-14 80.5 72 54.2
Cc02_g15570 Coffea canephora HOM05D005007 ORTHO05D006053 1.3e-13 79.7 74 52.7
Gohir.D01G042700 Gossypium hirsutum HOM05D005007 ORTHO05D006053 1.3e-13 79.7 91 46.2
Gorai.002G053600 Gossypium raimondii HOM05D005007 ORTHO05D006053 1.3e-13 79.7 91 46.2
Oeu039881.1 Olea europaea HOM05D005007 ORTHO05D006053 1.3e-13 79.7 71 50.7
ClCG07G010220 Citrullus lanatus HOM05D005007 ORTHO05D006053 1.8e-13 79.3 76 52.6
MELO3C007199.2 Cucumis melo HOM05D005007 ORTHO05D006053 2.3e-13 79.0 76 51.3
CsaV3_6G051040 Cucumis sativus L. HOM05D005007 ORTHO05D006053 2.3e-13 79.0 76 51.3
Hma1.2p1_0934F.1_g238510 Hydrangea macrophylla HOM05D005007 ORTHO05D006053 2.3e-13 79.0 81 46.9
TWI39G0558 Tripterygium wilfordii HOM05D005007 ORTHO05D006053 2.3e-13 79.0 63 57.1
CANSAT35G0905 Cannabis sativa HOM05D005007 ORTHO05D006053 3.0e-13 78.6 54 63.0
Duzib235G0435 Durio zibethinus HOM05D005007 ORTHO05D006053 3.0e-13 78.6 80 47.5
Sabra16G0257800 Salix brachista HOM05D005007 ORTHO05D006053 3.0e-13 78.6 72 52.8
Lsat_1_v5_gn_7_25701 Lactuca sativa HOM05D005007 ORTHO05D006053 3.9e-13 78.2 61 59.0
Rhsim02G0146700 Rhododendron simsii HOM05D005007 ORTHO05D006053 3.9e-13 78.2 78 48.7
Sed0011988 Sechium edule HOM05D005007 ORTHO05D006053 5.1e-13 77.8 90 43.3
Ca_17898_v3 Cicer arietinum L. HOM05D005007 ORTHO05D006053 6.7e-13 77.4 86 43.0
Glyma.05G160900 Glycine max HOM05D005007 ORTHO05D006053 6.7e-13 77.4 74 48.6
Migut.H01413 Erythranthe guttata HOM05D005007 ORTHO05D006053 8.7e-13 77.0 80 46.2
Prupe.4G161500 Prunus persica HOM05D005007 ORTHO05D006053 8.7e-13 77.0 68 54.4
SalBow8G4395 Salvia bowleyana HOM05D005007 ORTHO05D006053 8.7e-13 77.0 82 43.9
arahy.Tifrunner.gnm1.ann1.VZS9XU Arachis hypogaea HOM05D005007 ORTHO05D006053 1.1e-12 76.6 89 44.9
CSS0021075 Camellia sinensis var. sinensis HOM05D005007 ORTHO05D006053 1.1e-12 76.6 81 50.6
Gohir.A01G053200 Gossypium hirsutum HOM05D005007 ORTHO05D006053 1.1e-12 76.6 91 45.1
Sp7g17510 Schrenkiella parvula HOM05D005007 ORTHO05D006053 1.1e-12 76.6 82 46.3
CSS0026874 Camellia sinensis var. sinensis HOM05D005007 ORTHO05D006053 1.5e-12 76.3 79 49.4
Carub.0007s2243 Capsella rubella HOM05D005007 ORTHO05D006053 1.5e-12 76.3 92 42.4
Thhalv10027446m.g Eutrema salsugineum HOM05D005007 ORTHO05D006053 1.5e-12 76.3 93 40.9
Gohir.D05G156101 Gossypium hirsutum HOM05D005007 ORTHO05D006053 1.5e-12 76.3 72 47.2
RcHm_v2.0_Chr5g0030711 Rosa chinensis HOM05D005007 ORTHO05D006053 1.5e-12 76.3 52 63.5
arahy.Tifrunner.gnm1.ann1.HJBU6U Arachis hypogaea HOM05D005007 ORTHO05D006053 1.9e-12 75.9 89 44.9
ClCG01G023890 Citrullus lanatus HOM05D005007 ORTHO05D006053 2.5e-12 75.5 76 48.7
Actinidia18804 Actinidia chinensis HOM05D005007 ORTHO05D006053 3.3e-12 75.1 71 52.1
CARHR225660 Cardamine hirsuta HOM05D005007 ORTHO05D006053 3.3e-12 75.1 88 44.3
CiPaw.11G159400 Carya illinoinensis HOM05D005007 ORTHO05D006053 3.3e-12 75.1 81 46.9
Migut.H01416 Erythranthe guttata HOM05D005007 ORTHO05D006053 3.3e-12 75.1 69 50.7
Phvul.002G241000 Phaseolus vulgaris HOM05D005007 ORTHO05D006053 3.3e-12 75.1 75 49.3
Lsat_1_v5_gn_5_126541 Lactuca sativa HOM05D005007 ORTHO05D006053 4.3e-12 74.7 84 47.6
Potri.001G393001 Populus trichocarpa HOM05D005007 ORTHO05D006053 4.3e-12 74.7 78 48.7
DCAR_007938 Daucus carota HOM05D005007 ORTHO05D006053 5.7e-12 74.3 74 52.7
MSTRG.7429 Avicennia marina HOM05D005007 ORTHO05D006053 7.4e-12 73.9 79 44.3
HanXRQChr02g0038411 Helianthus annuus HOM05D005007 ORTHO05D006053 9.7e-12 73.6 70 52.9
Psat7g068680 Pisum sativum HOM05D005007 ORTHO05D006053 9.7e-12 73.6 75 50.7
PGSC0003DMG400028468 Solanum tuberosum HOM05D005007 ORTHO05D006053 9.7e-12 73.6 79 48.1
MD11G1264800 Malus domestica HOM05D005007 ORTHO05D006053 1.3e-11 73.2 50 62.0
TPR.G6805 Trifolium pratense HOM05D000213 ORTHO05D000426 1.3e-11 73.2 83 45.8
C03p81500 Brassica napus HOM05D005007 ORTHO05D006053 1.6e-11 72.8 69 49.3
BolC3t20421H Brassica oleracea HOM05D005007 ORTHO05D006053 1.6e-11 72.8 69 49.3
AUR62039477 Chenopodium quinoa HOM05D005007 ORTHO05D006053 1.6e-11 72.8 63 54.0
Glyma.08G118300 Glycine max HOM05D005007 ORTHO05D006053 2.2e-11 72.4 75 48.0
Sc16g0007670 Simmondsia chinensis HOM05D005007 ORTHO05D006053 2.2e-11 72.4 85 47.1
Sopen02g021150 Solanum pennellii HOM05D005007 ORTHO05D006053 2.2e-11 72.4 80 45.0
BraA08t33391Z Brassica rapa HOM05D005007 ORTHO05D006053 2.8e-11 72.0 69 49.3
Potri.011G108700 Populus trichocarpa HOM05D005007 ORTHO05D006053 2.8e-11 72.0 78 47.4
Sed0025620 Sechium edule HOM05D005007 ORTHO05D006053 2.8e-11 72.0 80 51.2
Eucgr.F01249 Eucalyptus grandis HOM05D005007 ORTHO05D006053 3.7e-11 71.6 91 40.7
Cpa.g.sc7.108 Carica papaya HOM05D005007 ORTHO05D006053 4.8e-11 71.2 72 51.4
RcHm_v2.0_Chr5g0011631 Rosa chinensis HOM05D005007 ORTHO05D006053 8.2e-11 70.5 82 47.6
Atru.chr2.2102 Acer truncatum HOM05D005007 ORTHO05D006053 1.1e-10 70.1 71 49.3
Solyc02g072170.3 Solanum lycopersicum HOM05D005007 ORTHO05D006053 1.1e-10 70.1 76 46.1
Nitab4.5_0007471g0020 Nicotiana tabacum HOM05D005007 ORTHO05D006053 1.4e-10 69.7 69 53.6
ECA236G3784 Erigeron canadensis HOM05D005007 ORTHO05D006053 1.8e-10 69.3 74 47.3
Ah.14g087010 Amaranthus hybridus HOM05D005007 ORTHO05D006053 2.4e-10 68.9 80 48.8
Gohir.A05G153450 Gossypium hirsutum HOM05D005007 ORTHO05D006053 2.4e-10 68.9 80 43.8
CsaV3_4G008110 Cucumis sativus L. HOM05D005007 ORTHO05D006053 3.1e-10 68.6 77 46.8
Nitab4.5_0000437g0140 Nicotiana tabacum HOM05D005007 ORTHO05D006053 3.1e-10 68.6 69 53.6
Actinidia16774 Actinidia chinensis HOM05D005007 ORTHO05D006053 6.9e-10 67.4 59 52.5
FvH4_3g07320 Fragaria vesca HOM05D005007 ORTHO05D006053 1.2e-09 66.6 98 42.9
FAN11G0120 Fragaria x ananassa HOM05D005007 ORTHO05D006053 1.2e-09 66.6 98 42.9
FAN21G0366 Fragaria x ananassa HOM05D005007 ORTHO05D006053 2.0e-09 65.9 63 52.4
Potri.001G389150 Populus trichocarpa HOM05D005007 ORTHO05D006053 2.0e-09 65.9 69 47.8
DCAR_005144 Daucus carota HOM05D005007 ORTHO05D006053 2.6e-09 65.5 80 38.8
Ah.09g233580 Amaranthus hybridus HOM05D005007 ORTHO05D006053 3.4e-09 65.1 62 50.0
EL10Ac4g08365 Beta vulgaris HOM05D005007 ORTHO05D006053 3.4e-09 65.1 49 65.3
HPP92_008753 Vanilla planifolia HOM05D005007 ORTHO05D006053 3.4e-09 65.1 58 48.3
Sabra11G0096200 Salix brachista HOM05D005007 ORTHO05D006053 4.5e-09 64.7 51 58.8
Nn6g34499 Nelumbo nucifera HOM05D005007 ORTHO05D006053 7.6e-09 63.9 47 70.2
FAN25G2704 Fragaria x ananassa HOM05D005007 ORTHO05D006053 1.3e-08 63.2 83 44.6
Peaxi162Scf00111g01466 Petunia axillaris HOM05D005007 ORTHO05D006053 1.3e-08 63.2 55 58.2
Migut.M00716 Erythranthe guttata HOM05D005007 ORTHO05D006053 2.2e-08 62.4 49 59.2
unitig_0.g744 Utricularia gibba HOM05D005007 ORTHO05D006053 2.2e-08 62.4 60 51.7
FAN16G2723 Fragaria x ananassa HOM05D005007 ORTHO05D006053 2.9e-08 62.0 78 46.2
Gorai.009G160600 Gossypium raimondii HOM05D005007 ORTHO05D006053 1.4e-07 59.7 54 44.4
PGSC0003DMG400044408 Solanum tuberosum HOM05D005007 ORTHO05D006053 4.2e-07 58.2 35 74.3
Eucgr.D00467 Eucalyptus grandis HOM05D005007 ORTHO05D006053 5.5e-07 57.8 65 46.2
Os06g0551500 Oryza sativa ssp. japonica HOM05D005007 ORTHO05D006053 9.3e-07 57.0 35 68.6
SGA_v2.0_scaffold181G39748 Striga asiatica HOM05D002453 ORTHO05D008746 9.3e-07 57.0 41 65.9


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