Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 0.0e+00 1086.6 524 100.0
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 4.6e-209 731.5 522 67.4
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 8.7e-208 727.2 505 69.3
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 2.5e-207 725.7 455 73.4
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 7.4e-207 724.2 463 71.9
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 7.4e-207 724.2 454 73.3
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 4.8e-206 721.5 495 70.7
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 1.8e-205 719.5 507 68.6
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 2.4e-205 719.2 454 73.6
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 3.1e-205 718.8 471 70.5
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 4.0e-205 718.4 454 72.5
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 5.3e-205 718.0 471 70.9
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 6.9e-205 717.6 515 67.4
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 6.9e-205 717.6 454 72.0
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 1.2e-204 716.8 465 70.8
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 1.5e-204 716.5 458 73.6
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 2.6e-204 715.7 471 70.5
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 3.4e-204 715.3 495 67.9
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 9.9e-204 713.8 454 72.9
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 2.2e-203 712.6 454 72.9
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 2.2e-203 712.6 454 72.5
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 2.9e-203 712.2 485 68.7
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 4.9e-203 711.4 454 71.8
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 6.4e-203 711.1 453 72.6
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 1.9e-202 709.5 510 67.5
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 2.4e-202 709.1 516 66.9
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 5.5e-202 708.0 500 67.0
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 5.5e-202 708.0 486 67.9
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 5.5e-202 708.0 454 71.6
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 2.1e-201 706.1 454 72.0
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 2.1e-201 706.1 454 72.5
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 2.7e-201 705.7 454 72.2
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 4.6e-201 704.9 477 69.4
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 4.6e-201 704.9 454 71.8
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 6.0e-201 704.5 479 69.3
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 1.0e-200 703.7 478 69.5
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 3.9e-200 701.8 457 70.9
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 8.7e-200 700.7 454 71.6
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 1.1e-199 700.3 515 65.0
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 1.1e-199 700.3 498 67.1
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 1.1e-199 700.3 454 70.9
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 1.5e-199 699.9 454 70.5
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 1.5e-199 699.9 454 70.9
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 1.9e-199 699.5 459 71.0
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 2.5e-199 699.1 492 67.1
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 3.3e-199 698.7 497 66.0
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 5.6e-199 698.0 522 64.6
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 9.6e-199 697.2 500 66.0
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 1.3e-198 696.8 454 72.5
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 1.6e-198 696.4 454 71.8
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 2.1e-198 696.0 454 70.0
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 6.2e-198 694.5 485 67.8
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 1.1e-197 693.7 453 70.9
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 1.8e-197 693.0 504 66.1
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 4.0e-197 691.8 454 69.8
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 2.6e-196 689.1 454 70.3
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 2.6e-196 689.1 478 67.6
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 3.4e-196 688.7 454 69.8
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 7.6e-196 687.6 511 65.2
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 1.0e-195 687.2 478 67.6
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 1.0e-195 687.2 483 67.3
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 1.3e-195 686.8 500 64.6
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 1.7e-195 686.4 463 69.3
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 1.7e-195 686.4 478 67.6
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 2.9e-195 685.6 454 70.5
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 2.9e-195 685.6 502 66.3
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 4.9e-195 684.9 454 69.4
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 6.5e-195 684.5 477 67.1
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.4e-194 683.3 503 66.6
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 1.9e-194 682.9 454 68.5
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 2.5e-194 682.6 457 70.0
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 2.5e-194 682.6 498 66.5
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 3.2e-194 682.2 510 64.3
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 5.5e-194 681.4 512 64.5
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 1.2e-193 680.2 454 68.5
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 1.2e-193 680.2 505 65.1
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.6e-193 679.9 498 66.1
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 3.5e-193 678.7 488 66.2
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 6.0e-193 677.9 467 67.5
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 1.0e-192 677.2 514 64.6
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 1.3e-192 676.8 455 68.8
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 1.3e-192 676.8 454 68.5
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 3.9e-192 675.2 501 64.9
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 6.7e-192 674.5 492 65.4
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 8.7e-192 674.1 454 69.4
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 1.3e-190 670.2 459 69.1
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 2.1e-190 669.5 459 69.1
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.1e-189 667.2 495 63.2
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 6.9e-189 664.5 453 66.2
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 9.1e-181 637.5 459 66.4
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 5.9e-180 634.8 454 64.8
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 3.3e-175 619.0 413 68.5
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 1.3e-174 617.1 452 61.5
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 1.7e-171 606.7 447 63.3
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 2.5e-170 602.8 449 63.3
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 3.6e-169 599.0 474 61.0
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 2.6e-167 592.8 464 62.5
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 5.9e-164 581.6 484 57.9
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 9.4e-162 574.3 454 61.5
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 3.2e-154 549.3 361 70.1
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 9.8e-151 537.7 435 61.1
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 6.3e-150 535.0 380 65.0
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 1.8e-149 533.5 454 57.7
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 8.0e-129 464.9 350 65.7
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 2.0e-124 450.3 458 49.8
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 5.8e-119 432.2 474 50.6
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 1.2e-113 414.5 474 46.8
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 1.4e-112 411.0 272 71.0
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 7.1e-109 398.7 264 71.6
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 2.4e-101 373.6 466 44.6
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 2.3e-83 313.9 452 40.7
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 1.1e-40 172.2 100 78.0
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 1.0e-35 155.6 226 36.7
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 8.8e-35 152.5 96 74.0
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 8.8e-35 152.5 96 74.0
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 8.8e-35 152.5 96 74.0
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 8.8e-35 152.5 96 74.0
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 7.5e-26 122.9 277 31.4
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 3.5e-23 114.0 78 66.7
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 4.9e-17 93.6 56 75.0
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 3.5e-07 60.8 43 62.8
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 4.6e-07 60.5 41 73.2
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 1.0e-06 59.3 37 64.9
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 1.7e-06 58.5 50 56.0


User provided reference genes

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