Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0269 Ceratophyllum demersum HOM05D002051 ORTHO05D002041 9.5e-40 166.4 84 100.0
CiPaw.05G094500 Carya illinoinensis HOM05D002051 ORTHO05D002041 3.0e-09 65.1 61 55.7
Solyc01g112280.3 Solanum lycopersicum HOM05D002051 ORTHO05D002041 3.9e-09 64.7 61 52.5
Sopen01g054390 Solanum pennellii HOM05D002051 ORTHO05D002041 3.9e-09 64.7 61 52.5
Haze_01961 Corylus avellana HOM05D002051 ORTHO05D002041 5.1e-09 64.3 52 63.5
Nitab4.5_0000783g0010 Nicotiana tabacum HOM05D002051 ORTHO05D002041 5.1e-09 64.3 61 54.1
Cfa004793 Carpinus fangiana HOM05D002051 ORTHO05D002041 6.6e-09 63.9 52 63.5
Ciclev10028440m.g Citrus clementina HOM05D002051 ORTHO05D002041 1.1e-08 63.2 61 52.5
Peaxi162Scf00362g00143 Petunia axillaris HOM05D002051 ORTHO05D002041 1.5e-08 62.8 61 50.8
Nitab4.5_0010601g0020 Nicotiana tabacum HOM05D002051 ORTHO05D002041 1.9e-08 62.4 61 52.5
QL11p056748 Quercus lobata HOM05D002051 ORTHO05D002041 1.9e-08 62.4 51 58.8
CAN.G1645.7 Capsicum annuum HOM05D002051 ORTHO05D002041 2.5e-08 62.0 61 50.8
Atru.chr5.3575 Acer truncatum HOM05D002051 ORTHO05D002041 3.3e-08 61.6 61 50.8
CSS0017538 Camellia sinensis var. sinensis HOM05D002051 ORTHO05D002041 3.3e-08 61.6 61 50.8
MSTRG.24941 Avicennia marina HOM05D002051 ORTHO05D002041 9.6e-08 60.1 52 59.6
Lj5A171T129 Lonicera japonica HOM05D002051 ORTHO05D002041 9.6e-08 60.1 61 50.8
Oeu006411.1 Olea europaea HOM05D002051 ORTHO05D002041 9.6e-08 60.1 61 45.9
QL11p056633 Quercus lobata HOM05D002051 ORTHO05D002041 1.2e-07 59.7 51 56.9
SalBow7G2557 Salvia bowleyana HOM05D002051 ORTHO05D002041 1.6e-07 59.3 52 59.6
TAR628G0030 Trochodendron aralioides HOM05D002051 ORTHO05D002041 1.6e-07 59.3 52 61.5
CiPaw.06G114300 Carya illinoinensis HOM05D002051 ORTHO05D002041 2.1e-07 58.9 52 57.7
Migut.C00316 Erythranthe guttata HOM05D002051 ORTHO05D002041 2.1e-07 58.9 52 57.7
QL11p056683 Quercus lobata HOM05D002051 ORTHO05D002041 2.1e-07 58.9 51 54.9
PGR142G2150 Punica granatum HOM05D002051 ORTHO05D002041 3.6e-07 58.2 52 57.7
Sabra04G0140000 Salix brachista HOM05D002051 ORTHO05D002041 3.6e-07 58.2 52 59.6
PSO675G4925 Papaver somniferum HOM05D002051 ORTHO05D002041 4.7e-07 57.8 52 59.6
Psat6g100400 Pisum sativum HOM05D002051 ORTHO05D002041 4.7e-07 57.8 52 55.8
Dinv41861 Davidia involucrata HOM05D002051 ORTHO05D002041 6.2e-07 57.4 52 55.8
Migut.N01367 Erythranthe guttata HOM05D002051 ORTHO05D002041 6.2e-07 57.4 52 55.8
Prupe.8G181800 Prunus persica HOM05D002051 ORTHO05D002041 6.2e-07 57.4 52 53.8
Lj2g0028099 Lotus japonicus HOM05D002051 ORTHO05D002041 8.1e-07 57.0 52 53.8
Potri.009G169300 Populus trichocarpa HOM05D002051 ORTHO05D002041 8.1e-07 57.0 52 51.9
SGA_v2.0_scaffold73G24494 Striga asiatica HOM05D002051 ORTHO05D002041 1.1e-06 56.6 52 57.7
ECA233G2334 Erigeron canadensis HOM05D002051 ORTHO05D002041 1.4e-06 56.2 61 47.5
AUR62010193 Chenopodium quinoa HOM05D002051 ORTHO05D002041 1.8e-06 55.8 43 60.5
Potri.004G208100 Populus trichocarpa HOM05D002051 ORTHO05D002041 1.8e-06 55.8 52 55.8
Aqoxy298s001 Aquilegia oxysepala HOM05D002051 ORTHO05D002041 2.4e-06 55.5 52 55.8
Aqoxy6G01536 Aquilegia oxysepala HOM05D002051 ORTHO05D002041 2.4e-06 55.5 52 55.8
Ca_12370_v3 Cicer arietinum L. HOM05D002051 ORTHO05D002041 2.4e-06 55.5 52 53.8
Gohir.A13G064200 Gossypium hirsutum HOM05D002051 ORTHO05D002041 2.4e-06 55.5 61 50.8
Gorai.013G064900 Gossypium raimondii HOM05D002051 ORTHO05D002041 2.4e-06 55.5 61 50.8
Medtr1g039010 Medicago truncatula HOM05D002051 ORTHO05D002041 2.4e-06 55.5 60 48.3
Phvul.003G001200 Phaseolus vulgaris HOM05D002051 ORTHO05D002041 3.1e-06 55.1 52 53.8
EL10Ac9g21555 Beta vulgaris HOM05D002051 ORTHO05D002041 4.0e-06 54.7 51 56.9
AUR62013192 Chenopodium quinoa HOM05D002051 ORTHO05D002041 4.0e-06 54.7 50 56.0
HanXRQChr16g0515211 Helianthus annuus HOM05D002051 ORTHO05D002041 4.0e-06 54.7 63 49.2
Manes.03G096800 Manihot esculenta HOM05D002051 ORTHO05D002041 4.0e-06 54.7 52 51.9
Manes.03G096900 Manihot esculenta HOM05D002051 ORTHO05D002041 4.0e-06 54.7 61 44.3
Rhsim11G0198400 Rhododendron simsii HOM05D002051 ORTHO05D002041 4.0e-06 54.7 61 47.5
Sed0005930 Sechium edule HOM05D002051 ORTHO05D002041 4.0e-06 54.7 52 57.7
VMungo0251G2191 Vigna mungo HOM05D002051 ORTHO05D002041 4.0e-06 54.7 52 51.9
Cpa.g.sc9.389 Carica papaya HOM05D002051 ORTHO05D002041 5.2e-06 54.3 52 51.9
Gohir.D09G061600 Gossypium hirsutum HOM05D002051 ORTHO05D002041 5.2e-06 54.3 61 49.2
Gohir.D13G057700 Gossypium hirsutum HOM05D002051 ORTHO05D002041 5.2e-06 54.3 61 49.2


User provided reference genes

Program Settings