Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 1.1e-209 733.0 352 100.0
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 1.2e-141 506.9 340 70.6
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 7.5e-139 497.7 343 67.6
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 3.5e-136 488.8 351 67.5
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 5.0e-135 485.0 346 66.8
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 9.5e-134 480.7 351 65.5
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 4.0e-132 475.3 331 67.7
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 4.0e-132 475.3 331 67.7
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 4.0e-132 475.3 341 66.6
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 3.4e-131 472.2 331 67.4
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 9.8e-131 470.7 384 60.2
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 1.3e-130 470.3 352 65.1
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 1.3e-130 470.3 334 68.3
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 2.9e-130 469.2 352 63.4
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 3.7e-130 468.8 335 67.2
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.4e-129 466.8 324 67.9
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 2.4e-129 466.1 347 65.4
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 1.2e-128 463.8 333 65.5
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 3.5e-128 462.2 353 62.9
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 7.8e-128 461.1 333 65.8
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.3e-127 459.5 330 66.7
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 3.0e-127 459.1 340 65.0
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 5.1e-127 458.4 336 65.8
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 1.1e-126 457.2 357 64.1
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 1.5e-126 456.8 336 65.2
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 1.9e-126 456.4 331 65.9
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 1.2e-125 453.8 331 64.7
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 1.2e-125 453.8 330 64.5
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 1.2e-125 453.8 346 64.7
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.8e-125 452.6 336 64.9
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 2.8e-125 452.6 331 65.3
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 3.6e-125 452.2 343 64.7
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 3.6e-125 452.2 332 66.6
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 8.1e-125 451.1 331 65.0
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 8.1e-125 451.1 331 64.0
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.1e-124 450.7 331 65.0
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 3.1e-124 449.1 329 63.8
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 4.0e-124 448.7 330 63.6
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 8.9e-124 447.6 350 63.4
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.2e-123 447.2 350 62.9
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 1.2e-123 447.2 336 64.0
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 2.0e-123 446.4 333 65.5
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 3.4e-123 445.7 324 66.7
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 4.4e-123 445.3 326 65.3
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 4.4e-123 445.3 331 66.5
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 7.6e-123 444.5 354 60.2
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 7.6e-123 444.5 350 60.6
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 9.9e-123 444.1 327 63.6
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 1.7e-122 443.4 354 62.4
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 1.9e-121 439.9 332 65.1
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 2.4e-121 439.5 337 63.5
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 5.4e-121 438.3 348 62.9
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 9.2e-121 437.6 344 62.2
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 9.2e-121 437.6 344 62.2
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 4.6e-120 435.3 339 62.5
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 3.9e-119 432.2 332 63.0
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 1.1e-118 430.6 344 61.3
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 1.5e-118 430.3 370 58.1
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.5e-118 430.3 335 63.3
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 1.5e-118 430.3 341 62.5
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 1.9e-118 429.9 327 64.8
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 1.9e-118 429.9 331 63.7
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 3.3e-118 429.1 344 60.8
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 5.6e-118 428.3 330 64.2
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 7.3e-118 427.9 344 60.5
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.6e-117 426.8 327 63.3
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 2.1e-117 426.4 340 60.9
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 2.8e-117 426.0 333 62.2
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 4.7e-117 425.2 326 64.1
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 2.6e-115 419.5 336 61.6
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 7.6e-115 417.9 328 62.5
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 7.6e-115 417.9 334 60.2
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 2.2e-114 416.4 334 61.7
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 7.8e-112 407.9 395 52.7
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 6.6e-111 404.8 355 54.4
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 3.3e-110 402.5 336 58.6
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 1.4e-108 397.1 345 56.8
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 2.4e-108 396.4 336 58.0
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 5.4e-105 385.2 280 63.9
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 1.1e-102 377.5 346 54.6
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 1.9e-102 376.7 265 65.3
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 5.6e-102 375.2 359 55.7
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.3e-101 374.0 351 56.7
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 6.2e-101 371.7 262 65.3
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 2.6e-99 366.3 261 65.5
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 6.4e-98 361.7 331 55.0
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 1.9e-97 360.1 333 56.2
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 6.0e-96 355.1 243 68.3
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 9.6e-94 347.8 321 55.1
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 1.4e-92 344.0 276 60.5
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 5.3e-92 342.0 248 62.9
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 5.3e-92 342.0 484 42.6
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 7.9e-88 328.2 235 64.7
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 7.4e-86 321.6 319 47.6
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 3.7e-85 319.3 332 47.0
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 3.8e-82 309.3 252 56.3
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 6.5e-74 282.0 178 70.2
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 3.2e-73 279.6 328 43.9
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.7e-69 267.3 326 46.6
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 8.2e-69 265.0 174 66.1
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 1.4e-68 264.2 367 42.8
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 5.9e-59 232.3 350 38.3
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 2.4e-36 157.1 145 55.2
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 8.3e-29 132.1 104 67.3
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 7.0e-28 129.0 78 74.4
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 6.2e-24 115.9 97 61.9
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 2.1e-16 90.9 101 44.6
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 5.8e-14 82.8 68 67.6
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 6.6e-10 69.3 51 68.6
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.5e-09 67.4 39 66.7
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.3e-09 66.6 47 59.6
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.4e-07 61.6 50 56.0
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 6.8e-07 59.3 73 43.8


User provided reference genes

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