Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0236 Ceratophyllum demersum HOM05D006960 ORTHO05D008699 2.0e-129 465.7 227 100.0
TAR629G1073 Trochodendron aralioides HOM05D006960 ORTHO05D008699 4.7e-49 198.7 223 52.9
CSS0036785 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 1.3e-46 190.7 223 53.8
CSS0028122 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 2.8e-46 189.5 223 53.4
ClCG09G009460 Citrullus lanatus HOM05D006960 ORTHO05D008699 3.7e-46 189.1 224 50.4
MELO3C024139.2 Cucumis melo HOM05D006960 ORTHO05D008699 4.1e-45 185.7 223 48.9
Ciclev10022060m.g Citrus clementina HOM05D006960 ORTHO05D008699 5.3e-45 185.3 224 48.7
QL04p060559 Quercus lobata HOM05D006960 ORTHO05D008699 5.3e-45 185.3 219 49.8
Nitab4.5_0000258g0220 Nicotiana tabacum HOM05D006960 ORTHO05D008699 9.1e-45 184.5 221 50.2
Aqoxy6G00316 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 1.2e-44 184.1 231 49.8
ECA236G0577 Erigeron canadensis HOM05D006960 ORTHO05D008699 1.5e-44 183.7 223 50.7
Prupe.2G189500 Prunus persica HOM05D006960 ORTHO05D008699 2.0e-44 183.3 217 50.7
GSVIVG01027159001 Vitis vinifera HOM05D006960 ORTHO05D008699 2.0e-44 183.3 219 50.2
Haze_15666 Corylus avellana HOM05D000451 ORTHO05D000351 2.6e-44 183.0 221 50.7
Actinidia20248 Actinidia chinensis HOM05D000567 ORTHO05D001981 4.5e-44 182.2 214 50.9
MD07G1150800 Malus domestica HOM05D006960 ORTHO05D008699 4.5e-44 182.2 220 50.0
HanXRQChr06g0170731 Helianthus annuus HOM05D006960 ORTHO05D008699 5.9e-44 181.8 224 50.9
Nitab4.5_0004506g0020 Nicotiana tabacum HOM05D006960 ORTHO05D008699 5.9e-44 181.8 222 49.5
PGSC0003DMG400007011 Solanum tuberosum HOM05D006960 ORTHO05D008699 5.9e-44 181.8 225 49.3
PSO063G6262 Papaver somniferum HOM05D006960 ORTHO05D008699 7.7e-44 181.4 222 51.4
CAN.G1178.29 Capsicum annuum HOM05D006960 ORTHO05D008699 1.0e-43 181.0 228 47.8
Rhsim01G0172900 Rhododendron simsii HOM05D006960 ORTHO05D008699 1.0e-43 181.0 223 49.3
Sed0021558 Sechium edule HOM05D006960 ORTHO05D008699 1.3e-43 180.6 226 50.0
DCAR_021504 Daucus carota HOM05D006960 ORTHO05D008699 2.2e-43 179.9 228 47.8
TWI14G0597 Tripterygium wilfordii HOM05D006960 ORTHO05D008699 3.8e-43 179.1 244 47.5
Rhsim04G0222700 Rhododendron simsii HOM05D006960 ORTHO05D008699 5.0e-43 178.7 223 48.9
Atru.chr5.678 Acer truncatum HOM05D006960 ORTHO05D008699 8.5e-43 177.9 224 48.2
Solyc05g050570.3 Solanum lycopersicum HOM05D006960 ORTHO05D008699 1.9e-42 176.8 226 48.2
Sopen05g029010 Solanum pennellii HOM05D006960 ORTHO05D008699 1.9e-42 176.8 226 48.2
MBI06_g44795_MAGBIO Magnolia biondii HOM05D006960 ORTHO05D008699 2.5e-42 176.4 219 48.9
FAN06G2002 Fragaria x ananassa HOM05D006960 ORTHO05D008699 3.2e-42 176.0 240 46.2
Lalb_Chr06g0163941 Lupinus albus HOM05D006960 ORTHO05D008699 4.2e-42 175.6 219 48.4
vmacro12673 Vaccinium macrocarpon HOM05D006960 ORTHO05D008699 5.5e-42 175.3 220 47.7
FAN10G0984 Fragaria x ananassa HOM05D006960 ORTHO05D008699 7.2e-42 174.9 216 49.5
FAN10G4095 Fragaria x ananassa HOM05D006960 ORTHO05D008699 7.2e-42 174.9 213 49.8
FAN01G3090 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.2e-41 174.1 216 49.5
FAN06G3195 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.6e-41 173.7 216 49.5
FvH4_7g16680 Fragaria vesca HOM05D006960 ORTHO05D008699 2.1e-41 173.3 216 49.5
Cc01_g12480 Coffea canephora HOM05D006960 ORTHO05D008699 6.1e-41 171.8 223 48.4
AUR62004502 Chenopodium quinoa HOM05D006960 ORTHO05D008699 1.0e-40 171.0 227 45.8
COL.COLO4_21448 Corchorus olitorius HOM05D006960 ORTHO05D008699 1.4e-40 170.6 239 46.4
Lsat_1_v5_gn_8_13101 Lactuca sativa HOM05D006960 ORTHO05D008699 1.8e-40 170.2 221 49.8
RcHm_v2.0_Chr1g0359831 Rosa chinensis HOM05D006960 ORTHO05D008699 1.8e-40 170.2 215 48.4
SalBow3G0783 Salvia bowleyana HOM05D006960 ORTHO05D008699 1.8e-40 170.2 218 47.2
Thecc.01G341400 Theobroma cacao HOM05D006960 ORTHO05D008699 2.3e-40 169.9 242 45.0
Peaxi162Scf00716g00022 Petunia axillaris HOM05D006960 ORTHO05D008699 3.0e-40 169.5 200 50.0
CANSAT56G1276 Cannabis sativa HOM05D006960 ORTHO05D008699 4.0e-40 169.1 225 44.9
CARHR001180 Cardamine hirsuta HOM05D006960 ORTHO05D008699 5.2e-40 168.7 241 45.6
Phvul.007G014400 Phaseolus vulgaris HOM05D006960 ORTHO05D008699 5.2e-40 168.7 224 45.5
PSO170G4910 Papaver somniferum HOM05D006960 ORTHO05D008699 6.7e-40 168.3 208 52.4
Psat6g234040 Pisum sativum HOM05D006960 ORTHO05D008699 1.1e-39 167.5 223 45.3
Glyma.20G102700 Glycine max HOM05D006960 ORTHO05D008699 2.0e-39 166.8 226 46.0
Gorai.007G109000 Gossypium raimondii HOM05D006960 ORTHO05D008699 2.0e-39 166.8 265 43.8
Cpa.g.sc46.111 Carica papaya HOM05D006960 ORTHO05D008699 3.3e-39 166.0 222 48.6
Potri.014G099500 Populus trichocarpa HOM05D006960 ORTHO05D008699 3.3e-39 166.0 238 44.5
BolC8t52877H Brassica oleracea HOM05D006960 ORTHO05D008699 5.7e-39 165.2 227 44.1
Gohir.A11G097200 Gossypium hirsutum HOM05D006960 ORTHO05D008699 5.7e-39 165.2 238 45.4
Medtr1g114590 Medicago truncatula HOM05D006960 ORTHO05D008699 5.7e-39 165.2 223 44.4
VMungo0720G2201 Vigna mungo HOM05D006960 ORTHO05D008699 5.7e-39 165.2 223 44.4
Gohir.D11G102000 Gossypium hirsutum HOM05D006960 ORTHO05D008699 7.5e-39 164.9 242 45.5
Nn8g41032 Nelumbo nucifera HOM05D006960 ORTHO05D008699 7.5e-39 164.9 202 49.5
PGR142G3971 Punica granatum HOM05D006960 ORTHO05D008699 9.7e-39 164.5 238 45.4
Lj5g0001318 Lotus japonicus HOM05D006960 ORTHO05D008699 1.7e-38 163.7 218 46.3
A09p69060 Brassica napus HOM05D006960 ORTHO05D008699 2.8e-38 162.9 224 44.2
C08p53630 Brassica napus HOM05D006960 ORTHO05D008699 2.8e-38 162.9 224 44.2
Migut.B01880 Erythranthe guttata HOM05D006960 ORTHO05D008699 3.7e-38 162.5 219 45.2
Medtr5g015740 Medicago truncatula HOM05D006960 ORTHO05D008699 4.8e-38 162.2 223 43.9
Sc01g0002630 Simmondsia chinensis HOM05D000016 ORTHO05D007083 4.8e-38 162.2 220 45.5
MSTRG.17349 Avicennia marina HOM05D006960 ORTHO05D008699 8.2e-38 161.4 231 44.2
CAN.G1385.4 Capsicum annuum HOM05D006960 ORTHO05D008699 1.1e-37 161.0 200 48.5
Eucgr.E00049 Eucalyptus grandis HOM05D006960 ORTHO05D008699 1.1e-37 161.0 213 46.9
Thhalv10008544m.g Eutrema salsugineum HOM05D006960 ORTHO05D008699 1.1e-37 161.0 233 43.8
EL10Ac1g00259 Beta vulgaris HOM05D006960 ORTHO05D008699 1.8e-37 160.2 221 45.7
BraA09t42243Z Brassica rapa HOM05D006960 ORTHO05D008699 2.4e-37 159.8 231 43.7
Sabra14G0073000 Salix brachista HOM05D006960 ORTHO05D008699 2.4e-37 159.8 223 45.3
Dinv22299 Davidia involucrata HOM05D006960 ORTHO05D008699 3.1e-37 159.5 207 49.3
Aqoxy3G01066 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 4.1e-37 159.1 200 49.0
Oeu007886.1 Olea europaea HOM05D006960 ORTHO05D008699 4.1e-37 159.1 241 43.2
Oeu014974.1 Olea europaea HOM05D006960 ORTHO05D008699 4.1e-37 159.1 241 43.2
Sp1g01000 Schrenkiella parvula HOM05D006960 ORTHO05D008699 4.1e-37 159.1 233 42.9
Ca_11259_v3 Cicer arietinum L. HOM05D006960 ORTHO05D008699 5.3e-37 158.7 219 43.4
Carub.0001s0093 Capsella rubella HOM05D006960 ORTHO05D008699 7.0e-37 158.3 249 43.8
Os04g0460500 Oryza sativa ssp. japonica HOM05D006960 ORTHO05D008699 7.0e-37 158.3 207 48.8
Manes.05G022300 Manihot esculenta HOM05D006960 ORTHO05D008699 1.2e-36 157.5 242 44.2
Zm00001eb080710 Zea mays HOM05D006960 ORTHO05D008699 3.5e-36 156.0 214 44.4
AL1G11170 Arabidopsis lyrata HOM05D006960 ORTHO05D008699 2.2e-35 153.3 92 79.3
AT1G01290 Arabidopsis thaliana HOM05D006960 ORTHO05D008699 3.8e-35 152.5 92 78.3
SGA_v2.0_scaffold22G09984 Striga asiatica HOM05D006960 ORTHO05D008699 2.5e-34 149.8 218 41.7
TPR.G4075 Trifolium pratense HOM05D006960 ORTHO05D008699 2.5e-34 149.8 250 42.0
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 3.2e-34 149.4 91 76.9
ATR0602G026 Amborella trichopoda HOM05D006960 ORTHO05D008699 1.6e-33 147.1 195 44.1
Aa31LG5G970 Aethionema arabicum HOM05D000451 ORTHO05D000351 6.1e-33 145.2 209 43.5
arahy.Tifrunner.gnm1.ann1.CCVT8N Arachis hypogaea HOM05D006960 ORTHO05D008699 4.0e-32 142.5 87 78.2
Hund16718 Selenicereus undatus HOM05D006960 ORTHO05D008699 1.5e-31 140.6 203 43.3
HPP92_002925 Vanilla planifolia HOM05D006960 ORTHO05D008699 1.5e-31 140.6 92 75.0
unitig_899.g14796 Utricularia gibba HOM05D006960 ORTHO05D008699 2.8e-30 136.3 92 68.5
FAN03G0019 Fragaria x ananassa HOM05D006960 ORTHO05D008699 6.3e-30 135.2 111 62.2
HPP92_028636 Vanilla planifolia HOM05D006960 ORTHO05D008699 2.7e-28 129.8 199 41.2
AUR62014969 Chenopodium quinoa HOM05D006960 ORTHO05D008699 1.0e-27 127.9 197 41.1
AUR62023452 Chenopodium quinoa HOM05D000040 ORTHO05D000759 2.1e-25 120.2 176 43.2
Mapoly0053s0024 Marchantia polymorpha HOM05D006960 ORTHO05D008699 1.8e-24 117.1 92 63.0
Pp3c20_11370 Physcomitrium patens HOM05D006960 ORTHO05D008699 3.0e-24 116.3 92 59.8
CBR_g23014 Chara braunii HOM05D006960 ORTHO05D008699 5.2e-24 115.5 94 60.6
SMO351G0341 Selaginella moellendorffii HOM05D006960 ORTHO05D008699 5.4e-21 105.5 92 55.4
VMungo0964G0001 Vigna mungo HOM05D006960 ORTHO05D008699 1.0e-19 101.3 91 51.6
CDE10G0916 Ceratophyllum demersum HOM05D000108 ORTHO05D001781 2.9e-19 99.8 61 80.3
Cre08.g361050 Chlamydomonas reinhardtii HOM05D006960 ORTHO05D008699 5.0e-19 99.0 92 51.1
MCO01G113 Micromonas commoda HOM05D006960 ORTHO05D008699 2.1e-17 93.6 92 51.1
Cpa.g.sc96.27 Carica papaya HOM05D006960 ORTHO05D008699 4.9e-14 82.4 88 51.1
Cfa022703 Carpinus fangiana HOM05D006960 ORTHO05D008699 1.1e-13 81.3 116 42.2
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 3.0e-11 73.2 82 42.7
PRCOL_00000953 Prasinoderma coloniale HOM05D006960 ORTHO05D008699 3.0e-11 73.2 54 66.7
CsaV3_7G025390 Cucumis sativus L. HOM05D006960 ORTHO05D008699 3.1e-08 63.2 155 30.3
Medtr5g015730 Medicago truncatula HOM05D006960 ORTHO05D008699 2.0e-07 60.5 36 72.2


User provided reference genes

Program Settings