Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 7.3e-245 850.1 428 100.0
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 1.4e-195 686.4 362 94.5
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.4e-195 686.4 431 81.4
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 3.3e-189 665.2 431 78.4
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 1.3e-188 663.3 380 86.6
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 2.1e-188 662.5 434 77.4
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 2.8e-188 662.1 445 76.4
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 3.7e-188 661.8 434 77.6
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 3.1e-187 658.7 434 77.4
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 1.2e-186 656.8 435 77.5
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 4.9e-185 651.4 426 77.5
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 1.1e-184 650.2 432 76.6
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.4e-184 649.8 415 78.6
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 1.9e-184 649.4 371 86.0
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 2.5e-184 649.0 382 84.0
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 5.5e-184 647.9 371 86.3
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 5.5e-184 647.9 383 84.9
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 7.1e-184 647.5 393 81.9
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 1.2e-183 646.7 433 76.4
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 1.6e-183 646.4 429 76.2
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 1.6e-183 646.4 383 83.3
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 2.1e-183 646.0 434 76.3
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 4.6e-183 644.8 369 85.4
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 7.9e-183 644.0 379 83.6
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 7.9e-183 644.0 425 78.4
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.3e-182 643.3 415 77.6
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 1.3e-182 643.3 427 77.0
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 3.9e-182 641.7 431 75.4
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 3.9e-182 641.7 435 75.6
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 5.1e-182 641.3 431 75.9
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 5.1e-182 641.3 431 75.9
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 5.1e-182 641.3 431 75.9
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.1e-181 640.2 389 82.5
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 1.1e-181 640.2 435 75.6
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 1.1e-181 640.2 371 84.9
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 3.3e-181 638.6 381 82.9
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 5.7e-181 637.9 431 75.9
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 9.7e-181 637.1 413 77.5
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 9.7e-181 637.1 431 76.6
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 9.7e-181 637.1 431 75.4
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 2.8e-180 635.6 371 84.6
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 3.7e-180 635.2 384 82.6
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 8.2e-180 634.0 415 76.9
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 4.1e-179 631.7 383 81.7
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 4.1e-179 631.7 381 82.2
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 5.3e-179 631.3 383 82.2
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 6.9e-179 630.9 367 84.7
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 6.9e-179 630.9 387 81.9
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 6.9e-179 630.9 406 78.1
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 1.2e-178 630.2 367 84.7
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 1.2e-178 630.2 412 78.4
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 1.5e-178 629.8 387 81.9
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 2.6e-178 629.0 367 84.5
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 2.6e-178 629.0 387 80.6
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 1.0e-177 627.1 405 77.5
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 1.7e-177 626.3 384 81.2
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 3.8e-177 625.2 377 82.5
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 1.4e-176 623.2 369 84.0
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 1.4e-176 623.2 360 85.8
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 2.5e-176 622.5 431 75.2
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 4.2e-176 621.7 384 81.2
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 5.5e-176 621.3 426 74.2
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 7.2e-176 620.9 400 79.5
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 7.2e-176 620.9 429 75.3
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 1.6e-175 619.8 431 74.7
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 4.6e-175 618.2 430 74.0
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 4.6e-175 618.2 434 73.0
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 1.4e-174 616.7 434 73.5
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 1.8e-174 616.3 435 74.5
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 1.8e-174 616.3 433 72.5
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 3.0e-174 615.5 433 73.0
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 3.9e-174 615.1 431 73.5
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 2.5e-173 612.5 427 73.8
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 2.5e-173 612.5 406 76.1
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 5.7e-173 611.3 343 85.7
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 2.2e-172 609.4 456 70.8
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 8.2e-172 607.4 411 75.7
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 2.4e-171 605.9 387 79.1
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 2.4e-171 605.9 406 75.6
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 4.1e-171 605.1 436 72.2
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 5.3e-171 604.7 365 82.2
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 9.1e-171 604.0 399 76.9
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 9.1e-171 604.0 383 78.3
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 9.1e-171 604.0 381 79.5
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 1.5e-170 603.2 381 79.3
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 2.0e-170 602.8 381 79.0
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 2.2e-169 599.4 432 73.4
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 2.9e-169 599.0 434 71.0
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 3.8e-169 598.6 329 88.1
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 5.0e-169 598.2 371 80.3
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 8.5e-169 597.4 391 77.7
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 2.5e-168 595.9 402 74.6
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 2.5e-168 595.9 362 80.1
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 3.2e-168 595.5 383 76.2
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 3.2e-168 595.5 401 74.6
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 3.2e-168 595.5 383 77.5
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 9.4e-168 594.0 401 75.1
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 7.9e-167 590.9 407 73.0
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 3.0e-166 589.0 408 74.3
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 3.9e-166 588.6 433 71.4
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 2.2e-164 582.8 315 89.5
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 2.2e-164 582.8 371 77.6
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 2.4e-163 579.3 379 75.7
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 4.1e-163 578.6 383 75.7
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 4.1e-163 578.6 383 75.7
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 4.1e-163 578.6 383 75.7
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 9.1e-163 577.4 383 75.5
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 1.0e-161 573.9 383 75.2
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 2.5e-160 569.3 400 75.0
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 1.2e-159 567.0 385 73.5
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 2.7e-159 565.8 401 71.3
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 5.3e-155 551.6 326 83.7
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 2.9e-153 545.8 382 74.9
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 4.2e-152 542.0 367 74.9
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 4.2e-152 542.0 367 74.9
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 5.2e-142 508.4 369 73.7
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 2.6e-141 506.1 283 86.6
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 2.1e-135 486.5 424 61.6
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 8.9e-134 481.1 352 69.6
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 1.2e-133 480.7 351 71.8
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 6.3e-132 474.9 349 68.8
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.4e-131 473.8 352 68.2
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 2.4e-131 473.0 314 76.8
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 4.1e-131 472.2 347 67.7
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 1.2e-130 470.7 338 68.3
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.0e-129 467.6 326 70.2
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 2.5e-128 463.0 335 68.1
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 2.5e-128 463.0 335 68.1
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 2.5e-128 463.0 335 68.1
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 6.1e-127 458.4 338 67.2
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 3.1e-126 456.1 338 66.9
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 4.1e-123 445.7 323 70.0
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 9.5e-120 434.5 395 59.7
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 6.8e-118 428.3 376 58.2
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 3.2e-115 419.5 344 59.6
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 5.1e-113 412.1 312 66.0
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.4e-107 393.3 282 68.1
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 2.3e-105 386.7 300 70.7
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 8.6e-105 384.8 261 74.7
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 2.5e-104 383.3 224 84.4
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 4.5e-85 319.3 232 70.3
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 5.7e-72 275.8 234 62.8
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 1.1e-70 271.6 193 71.5
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 2.2e-68 263.8 298 53.0
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 1.1e-67 261.5 162 79.6
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 3.4e-61 240.0 276 48.6
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 2.5e-56 223.8 149 71.8
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 3.3e-56 223.4 161 67.1
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 2.6e-53 213.8 161 64.6
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 4.4e-48 196.4 311 38.9
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 1.4e-46 191.4 158 59.5
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 1.5e-45 188.0 151 62.9
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 8.5e-44 182.2 100 88.0
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.1e-43 181.8 148 64.9
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 7.2e-43 179.1 101 80.2
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 8.0e-42 175.6 104 82.7
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 6.7e-41 172.6 101 77.2
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 3.7e-39 166.8 151 58.3
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 3.7e-39 166.8 158 55.7
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 1.3e-36 158.3 100 73.0
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 3.2e-35 153.7 77 87.0
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 4.0e-33 146.7 136 60.3
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 5.2e-33 146.4 121 66.1
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 6.8e-33 146.0 212 39.2
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 7.5e-32 142.5 74 82.4
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 9.4e-27 125.6 72 84.7
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 9.1e-22 109.0 74 74.3
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 4.7e-18 96.7 106 50.9
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 8.0e-18 95.9 160 40.6
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 4.9e-15 86.7 116 47.4
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 4.9e-15 86.7 116 47.4
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 5.9e-13 79.7 49 79.6
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 4.3e-11 73.6 77 51.9
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 6.8e-09 66.2 36 86.1
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 9.8e-08 62.4 39 79.5


User provided reference genes

Program Settings