Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 6.9e-93 344.0 175 100.0
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 2.0e-39 166.4 97 83.5
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 8.6e-19 97.8 99 51.5
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 8.6e-19 97.8 99 51.5
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.6e-17 93.6 101 51.5
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 6.2e-17 91.7 97 57.7
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.8e-16 90.1 103 51.5
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 5.2e-16 88.6 109 45.9
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 5.2e-16 88.6 101 47.5
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 1.5e-15 87.0 108 48.1
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 9.9e-15 84.3 104 49.0
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 9.9e-15 84.3 105 49.5
Actinidia22161 Actinidia chinensis HOM05D007590 ORTHO05D007875 1.3e-14 84.0 94 48.9
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 1.3e-14 84.0 107 47.7
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 2.2e-14 83.2 107 49.5
Phvul.002G164500 Phaseolus vulgaris HOM05D007590 ORTHO05D007875 3.7e-14 82.4 94 45.7
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 6.4e-14 81.6 107 45.8
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 4.1e-13 79.0 103 44.7
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 4.1e-13 79.0 111 44.1
Glyma.01G225600 Glycine max HOM05D007590 ORTHO05D007875 1.6e-12 77.0 97 43.3
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 1.6e-12 77.0 95 46.3
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 2.1e-12 76.6 100 43.0
Potri.001G091500 Populus trichocarpa HOM05D007590 ORTHO05D007875 2.1e-12 76.6 100 48.0
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 3.5e-12 75.9 109 45.0
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 6.0e-12 75.1 111 43.2
MSTRG.11924 Avicennia marina HOM05D007590 ORTHO05D007875 7.8e-12 74.7 95 45.3
Gohir.D12G237700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.3e-11 73.9 100 49.0
Gohir.D12G237966 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.3e-11 73.9 100 49.0
Gorai.008G254500 Gossypium raimondii HOM05D007590 ORTHO05D007875 1.3e-11 73.9 100 49.0
Sabra01G0067900 Salix brachista HOM05D007590 ORTHO05D007875 1.3e-11 73.9 100 47.0
Cfa012011 Carpinus fangiana HOM05D007590 ORTHO05D007875 1.7e-11 73.6 111 44.1
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 1.7e-11 73.6 101 45.5
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 1.7e-11 73.6 93 43.0
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 2.3e-11 73.2 99 46.5
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 2.3e-11 73.2 93 43.0
Cc08_g16080 Coffea canephora HOM05D007590 ORTHO05D007875 3.0e-11 72.8 104 43.3
FAN13G0413 Fragaria x ananassa HOM05D007590 ORTHO05D007875 3.0e-11 72.8 103 47.6
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 6.6e-11 71.6 107 46.7
Lalb_Chr05g0211541 Lupinus albus HOM05D007590 ORTHO05D007875 6.6e-11 71.6 103 42.7
Nitab4.5_0002782g0040 Nicotiana tabacum HOM05D007590 ORTHO05D007875 6.6e-11 71.6 96 44.8
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 8.6e-11 71.2 94 44.7
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 1.1e-10 70.9 103 42.7
Potri.003G140100 Populus trichocarpa HOM05D007590 ORTHO05D007875 1.1e-10 70.9 100 46.0
Sed0026863 Sechium edule HOM05D007590 ORTHO05D007875 1.1e-10 70.9 108 42.6
CsaV3_4G006590 Cucumis sativus L. HOM05D007590 ORTHO05D007875 1.5e-10 70.5 106 43.4
FAN04G0970 Fragaria x ananassa HOM05D007590 ORTHO05D007875 1.5e-10 70.5 103 46.6
Sabra03G0101100 Salix brachista HOM05D007590 ORTHO05D007875 1.5e-10 70.5 100 44.0
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 1.9e-10 70.1 94 48.9
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 2.5e-10 69.7 96 44.8
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 2.5e-10 69.7 103 44.7
Medtr5g009260 Medicago truncatula HOM05D007590 ORTHO05D007875 2.5e-10 69.7 94 43.6
Nitab4.5_0001231g0140 Nicotiana tabacum HOM05D007590 ORTHO05D007875 2.5e-10 69.7 96 43.8
Peaxi162Scf00074g00097 Petunia axillaris HOM05D007590 ORTHO05D007875 2.5e-10 69.7 83 45.8
Sed0003477 Sechium edule HOM05D007590 ORTHO05D007875 3.3e-10 69.3 58 58.6
CANSAT21G0370 Cannabis sativa HOM05D007590 ORTHO05D007875 4.3e-10 68.9 115 40.0
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 4.3e-10 68.9 104 48.1
Lsat_1_v5_gn_3_10720 Lactuca sativa HOM05D007590 ORTHO05D007875 5.6e-10 68.6 106 41.5
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 7.3e-10 68.2 104 45.2
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 7.3e-10 68.2 99 47.5
Oeu063521.1 Olea europaea HOM05D007590 ORTHO05D007875 7.3e-10 68.2 95 43.2
Ca_24513_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 9.6e-10 67.8 95 44.2
Ca_29733_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 9.6e-10 67.8 95 44.2
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 1.6e-09 67.0 106 41.5
SalBow1G4032 Salvia bowleyana HOM05D007590 ORTHO05D007875 1.6e-09 67.0 91 44.0
SalBow1G6340 Salvia bowleyana HOM05D007590 ORTHO05D007875 1.6e-09 67.0 91 44.0
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 1.6e-09 67.0 109 38.5
Duzib068G0902 Durio zibethinus HOM05D007590 ORTHO05D007875 2.8e-09 66.2 91 41.8
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 3.6e-09 65.9 108 39.8
Gohir.A12G236500 Gossypium hirsutum HOM05D007590 ORTHO05D007875 4.7e-09 65.5 102 46.1
ClCG07G011620 Citrullus lanatus HOM05D007590 ORTHO05D007875 6.2e-09 65.1 64 51.6
MELO3C016294.2 Cucumis melo HOM05D007590 ORTHO05D007875 8.1e-09 64.7 103 40.8
Glyma.11G017400 Glycine max HOM05D007590 ORTHO05D007875 1.4e-08 63.9 100 42.0
MBI06_g08455_MAGBIO Magnolia biondii HOM05D007590 ORTHO05D007875 1.4e-08 63.9 69 52.2
EL10Ac5g12916 Beta vulgaris HOM05D007590 ORTHO05D007875 3.1e-08 62.8 75 52.0
Ciclev10022592m.g Citrus clementina HOM05D007590 ORTHO05D007875 3.1e-08 62.8 103 39.8
Ah.12g052560 Amaranthus hybridus HOM05D007590 ORTHO05D007875 8.9e-08 61.2 106 40.6
ATR0602G105 Amborella trichopoda HOM05D007590 ORTHO05D007875 1.5e-07 60.5 132 34.1
SGA_v2.0_scaffold305G47972 Striga asiatica HOM05D007590 ORTHO05D007875 1.5e-07 60.5 101 39.6
HPP92_008631 Vanilla planifolia HOM05D026338 ORTHO05D007875 4.4e-07 58.9 99 37.4
CiPaw.12G082700 Carya illinoinensis HOM05D007590 ORTHO05D007875 7.6e-07 58.2 103 39.8
Sopen08g004200 Solanum pennellii HOM05D007590 ORTHO05D007875 7.6e-07 58.2 105 41.9
Duzib084G0874 Durio zibethinus HOM05D007590 ORTHO05D007875 9.9e-07 57.8 92 41.3
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 1.3e-06 57.4 105 40.0
DCAR_006487 Daucus carota HOM05D007590 ORTHO05D007875 1.3e-06 57.4 103 40.8
BcaB07g31463 Brassica carinata HOM05D010600 ORTHO05D007875 2.9e-06 56.2 114 35.1
Migut.A00642 Erythranthe guttata HOM05D007590 ORTHO05D007875 2.9e-06 56.2 97 37.1
COL.COLO4_10703 Corchorus olitorius HOM05D007590 ORTHO05D007875 4.9e-06 55.5 76 44.7
PGSC0003DMG400005790 Solanum tuberosum HOM05D007590 ORTHO05D007875 4.9e-06 55.5 105 42.9
Thhalv10023875m.g Eutrema salsugineum HOM05D010600 ORTHO05D007875 8.4e-06 54.7 116 32.8


User provided reference genes

Program Settings