Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0156 Ceratophyllum demersum HOM05D003549 ORTHO05D004223 2.8e-19 98.2 75 100.0
CDE10G1218 Ceratophyllum demersum HOM05D003549 ORTHO05D004223 2.1e-14 82.0 66 93.9
PSO017G2368 Papaver somniferum HOM05D003549 ORTHO05D004223 1.4e-13 79.3 71 66.2
Lsat_1_v5_gn_4_74920 Lactuca sativa HOM05D003549 ORTHO05D004223 3.0e-13 78.2 73 64.4
PSO478G4862 Papaver somniferum HOM05D003549 ORTHO05D004223 4.0e-13 77.8 71 64.8
Cc04_g12860 Coffea canephora HOM05D003549 ORTHO05D004223 6.8e-13 77.0 73 63.0
Nn8g39923 Nelumbo nucifera HOM05D003549 ORTHO05D004223 6.8e-13 77.0 71 62.0
Rhsim12G0163400 Rhododendron simsii HOM05D003549 ORTHO05D004223 6.8e-13 77.0 69 59.4
TAR629G2438 Trochodendron aralioides HOM05D003549 ORTHO05D004223 6.8e-13 77.0 71 59.2
PSO832G2372 Papaver somniferum HOM05D003549 ORTHO05D004223 1.2e-12 76.3 75 61.3
PSO063G4497 Papaver somniferum HOM05D003549 ORTHO05D004223 1.5e-12 75.9 75 58.7
Nitab4.5_0000852g0140 Nicotiana tabacum HOM05D003549 ORTHO05D004223 2.0e-12 75.5 75 60.0
Nitab4.5_0003857g0060 Nicotiana tabacum HOM05D003549 ORTHO05D004223 2.0e-12 75.5 75 60.0
TWI81G0050 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 2.6e-12 75.1 71 60.6
TWI81G1057 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 2.6e-12 75.1 71 60.6
Peaxi162Scf00017g02716 Petunia axillaris HOM05D003549 ORTHO05D004223 3.4e-12 74.7 75 58.7
RcHm_v2.0_Chr7g0193821 Rosa chinensis HOM05D003549 ORTHO05D004223 5.7e-12 73.9 73 63.0
CiPaw.12G025200 Carya illinoinensis HOM05D003549 ORTHO05D004223 7.5e-12 73.6 69 60.9
ECA232G0606 Erigeron canadensis HOM05D003549 ORTHO05D004223 7.5e-12 73.6 78 61.5
TWI15G0885 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 9.7e-12 73.2 71 59.2
CiPaw.11G028500 Carya illinoinensis HOM05D003549 ORTHO05D004223 1.3e-11 72.8 69 63.8
SalBow2G1727 Salvia bowleyana HOM05D003549 ORTHO05D004223 1.3e-11 72.8 75 53.3
SGA_v2.0_scaffold90G27958 Striga asiatica HOM05D000215 ORTHO05D003454 1.7e-11 72.4 75 54.7
ClCG01G013030 Citrullus lanatus HOM05D003549 ORTHO05D004223 2.2e-11 72.0 71 64.8
CsaV3_1G008390 Cucumis sativus L. HOM05D003549 ORTHO05D004223 2.2e-11 72.0 71 64.8
Phvul.001G059000 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 2.2e-11 72.0 71 62.0
RcHm_v2.0_Chr7g0184521 Rosa chinensis HOM05D003549 ORTHO05D004223 2.2e-11 72.0 73 61.6
Solyc03g114170.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 2.8e-11 71.6 75 58.7
Haze_07495 Corylus avellana HOM05D003549 ORTHO05D004223 3.7e-11 71.2 71 63.4
FAN04G1549 Fragaria x ananassa HOM05D003549 ORTHO05D004223 3.7e-11 71.2 73 61.6
FAN08G2999 Fragaria x ananassa HOM05D003549 ORTHO05D004223 3.7e-11 71.2 73 61.6
FAN13G2761 Fragaria x ananassa HOM05D003549 ORTHO05D004223 3.7e-11 71.2 73 61.6
MBI15_g31119_MAGBIO Magnolia biondii HOM05D003549 ORTHO05D004223 3.7e-11 71.2 70 64.3
Sopen03g033240 Solanum pennellii HOM05D003549 ORTHO05D004223 3.7e-11 71.2 75 58.7
GSVIVG01032498001 Vitis vinifera HOM05D003549 ORTHO05D004223 3.7e-11 71.2 72 61.1
Duzib205G0517 Durio zibethinus HOM05D003549 ORTHO05D004223 4.8e-11 70.9 75 56.0
Lj6g0023924 Lotus japonicus HOM05D003549 ORTHO05D004223 4.8e-11 70.9 71 60.6
QL02p076964 Quercus lobata HOM05D003549 ORTHO05D004223 4.8e-11 70.9 71 59.2
Migut.D01775 Erythranthe guttata HOM05D003549 ORTHO05D004223 6.3e-11 70.5 75 61.3
HanXRQChr16g0517241 Helianthus annuus HOM05D003549 ORTHO05D004223 6.3e-11 70.5 73 61.6
PGSC0003DMG400024492 Solanum tuberosum HOM05D003549 ORTHO05D004223 6.3e-11 70.5 75 57.3
Dinv33505 Davidia involucrata HOM05D003549 ORTHO05D004223 8.3e-11 70.1 72 55.6
Duzib084G0774 Durio zibethinus HOM05D003549 ORTHO05D004223 8.3e-11 70.1 75 57.3
Glyma.14G134200 Glycine max HOM05D003549 ORTHO05D004223 8.3e-11 70.1 71 62.0
TWI60G0590 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 8.3e-11 70.1 71 56.3
Duzib068G0952 Durio zibethinus HOM05D003549 ORTHO05D004223 1.1e-10 69.7 81 70.4
Glyma.04G181200 Glycine max HOM05D003549 ORTHO05D004223 1.1e-10 69.7 71 62.0
Hma1.2p1_0176F.1_g077660 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 1.1e-10 69.7 71 60.6
Hund03159 Selenicereus undatus HOM05D003549 ORTHO05D004223 1.1e-10 69.7 71 62.0
CAN.G628.73 Capsicum annuum HOM05D003549 ORTHO05D004223 1.4e-10 69.3 75 60.0
Ca_16195_v3 Cicer arietinum L. HOM05D003549 ORTHO05D004223 1.4e-10 69.3 71 57.7
Peaxi162Scf00535g00046 Petunia axillaris HOM05D003549 ORTHO05D004223 1.4e-10 69.3 75 53.3
Dinv09155 Davidia involucrata HOM05D003549 ORTHO05D004223 1.8e-10 68.9 71 60.6
Glyma.17G198800 Glycine max HOM05D003549 ORTHO05D004223 1.8e-10 68.9 67 62.7
Lj1g0007079 Lotus japonicus HOM05D003549 ORTHO05D004223 1.8e-10 68.9 71 60.6
Sed0001837 Sechium edule HOM05D003549 ORTHO05D004223 2.4e-10 68.6 71 56.3
Actinidia33056 Actinidia chinensis HOM05D000215 ORTHO05D003454 3.1e-10 68.2 71 62.0
Ciclev10023184m.g Citrus clementina HOM05D003549 ORTHO05D004223 3.1e-10 68.2 71 63.4
Zm00001eb332940 Zea mays HOM05D003549 ORTHO05D004223 3.1e-10 68.2 76 57.9
Aqoxy3G00995 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 4.1e-10 67.8 76 56.6
Nn2g12408 Nelumbo nucifera HOM05D003549 ORTHO05D004223 4.1e-10 67.8 69 66.7
Psat5g114160 Pisum sativum HOM05D003549 ORTHO05D004223 4.1e-10 67.8 71 59.2
TAR622G0024 Trochodendron aralioides HOM05D003549 ORTHO05D004223 4.1e-10 67.8 71 60.6
TAR622G1417 Trochodendron aralioides HOM05D003549 ORTHO05D004223 4.1e-10 67.8 71 60.6
Actinidia04982 Actinidia chinensis HOM05D000215 ORTHO05D003454 7.0e-10 67.0 71 60.6
FvH4_5g05150 Fragaria vesca HOM05D003549 ORTHO05D004223 7.0e-10 67.0 73 58.9
FAN18G4010 Fragaria x ananassa HOM05D003549 ORTHO05D004223 7.0e-10 67.0 73 58.9
Oeu000929.1 Olea europaea HOM05D003549 ORTHO05D004223 7.0e-10 67.0 74 58.1
DCAR_021678 Daucus carota HOM05D003549 ORTHO05D004223 9.1e-10 66.6 69 65.2
Glyma.06G183700 Glycine max HOM05D003549 ORTHO05D004223 9.1e-10 66.6 71 59.2
Solyc06g071390.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 9.1e-10 66.6 75 60.0
Sopen06g027670 Solanum pennellii HOM05D003549 ORTHO05D004223 9.1e-10 66.6 75 60.0
PGSC0003DMG400027096 Solanum tuberosum HOM05D003549 ORTHO05D004223 9.1e-10 66.6 75 60.0
Actinidia19094 Actinidia chinensis HOM05D003549 ORTHO05D004223 1.2e-09 66.2 71 60.6
Lalb_Chr08g0236401 Lupinus albus HOM05D003549 ORTHO05D004223 1.2e-09 66.2 71 57.7
Sc04g0001880 Simmondsia chinensis HOM05D003549 ORTHO05D004223 1.6e-09 65.9 77 61.0
MD06G1177000 Malus domestica HOM05D003549 ORTHO05D004223 2.0e-09 65.5 70 60.0
COL.COLO4_34052 Corchorus olitorius HOM05D003549 ORTHO05D004223 2.7e-09 65.1 75 70.7
Phvul.009G179900 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 2.7e-09 65.1 71 56.3
RcHm_v2.0_Chr2g0170951 Rosa chinensis HOM05D003549 ORTHO05D004223 2.7e-09 65.1 70 58.6
Sed0023520 Sechium edule HOM05D003549 ORTHO05D004223 2.7e-09 65.1 71 63.4
THA.LOC109116495 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 3.5e-09 64.7 71 56.3
Potri.017G066900 Populus trichocarpa HOM05D003549 ORTHO05D004223 4.5e-09 64.3 71 56.3
TAR371G0468 Trochodendron aralioides HOM05D003549 ORTHO05D004223 4.5e-09 64.3 71 63.4
arahy.Tifrunner.gnm1.ann1.G4GSC6 Arachis hypogaea HOM05D003549 ORTHO05D004223 1.0e-08 63.2 71 57.7
arahy.Tifrunner.gnm1.ann1.TT1NYY Arachis hypogaea HOM05D003549 ORTHO05D004223 1.0e-08 63.2 71 57.7
MD14G1183200 Malus domestica HOM05D003549 ORTHO05D004223 1.3e-08 62.8 70 58.6
FAN02G2804 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.7e-08 62.4 70 57.1
FAN05G0330 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.7e-08 62.4 70 57.1
FAN09G2996 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.7e-08 62.4 70 57.1
FAN09G4496 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.7e-08 62.4 70 57.1
BcaB03g15337 Brassica carinata HOM05D003549 ORTHO05D004223 2.2e-08 62.0 71 54.9
CSS0022405 Camellia sinensis var. sinensis HOM05D003549 ORTHO05D004223 2.9e-08 61.6 71 57.7
ClCG08G009420 Citrullus lanatus HOM05D003549 ORTHO05D004223 2.9e-08 61.6 71 62.0
MELO3C026538.2 Cucumis melo HOM05D003549 ORTHO05D004223 2.9e-08 61.6 71 62.0
CsaV3_6G031560 Cucumis sativus L. HOM05D003549 ORTHO05D004223 2.9e-08 61.6 71 62.0
Potri.001G334600 Populus trichocarpa HOM05D003549 ORTHO05D004223 2.9e-08 61.6 65 60.0
Prupe.3G282400 Prunus persica HOM05D003549 ORTHO05D004223 3.8e-08 61.2 72 54.2
Prupe.5G175700 Prunus persica HOM05D003549 ORTHO05D004223 3.8e-08 61.2 70 58.6
Ciclev10017382m.g Citrus clementina HOM05D003549 ORTHO05D004223 6.5e-08 60.5 71 57.7
Gohir.A07G060300 Gossypium hirsutum HOM05D003549 ORTHO05D004223 6.5e-08 60.5 74 52.7
Manes.14G067300 Manihot esculenta HOM05D003549 ORTHO05D004223 8.5e-08 60.1 73 64.4
Medtr3g078130 Medicago truncatula HOM05D003549 ORTHO05D004223 8.5e-08 60.1 71 53.5
Thecc.03G009800 Theobroma cacao HOM05D003549 ORTHO05D004223 8.5e-08 60.1 75 53.3
HPP92_002194 Vanilla planifolia HOM05D003549 ORTHO05D004223 8.5e-08 60.1 73 54.8
ECA246G5096 Erigeron canadensis HOM05D003549 ORTHO05D004223 1.1e-07 59.7 74 59.5
Aa31LG2G1940 Aethionema arabicum HOM05D003549 ORTHO05D004223 1.9e-07 58.9 71 54.9
FvH4_6g50520 Fragaria vesca HOM05D003549 ORTHO05D004223 2.5e-07 58.5 70 54.3
FAN14G1319 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.5e-07 58.5 70 54.3
A07p32720 Brassica napus HOM05D003549 ORTHO05D004223 3.2e-07 58.2 69 56.5
C06p38930 Brassica napus HOM05D003549 ORTHO05D004223 3.2e-07 58.2 69 56.5
BolC6t38985H Brassica oleracea HOM05D003549 ORTHO05D004223 3.2e-07 58.2 69 56.5
BraA07t30898Z Brassica rapa HOM05D003549 ORTHO05D004223 3.2e-07 58.2 69 56.5
SMO139G0002 Selaginella moellendorffii HOM05D003549 ORTHO05D004223 4.2e-07 57.8 72 51.4
THA.LOC104805767 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 5.5e-07 57.4 68 57.4
unitig_26.g9627 Utricularia gibba HOM05D000915 ORTHO05D001662 7.2e-07 57.0 74 54.1
Mapoly0025s0126 Marchantia polymorpha HOM05D003549 ORTHO05D004223 1.2e-06 56.2 65 50.8
SMO145G0027 Selaginella moellendorffii HOM05D003549 ORTHO05D004223 1.2e-06 56.2 73 49.3
CAN.G781.29 Capsicum annuum HOM05D003549 ORTHO05D004223 1.6e-06 55.8 75 53.3
SalBow5G5409 Salvia bowleyana HOM05D003549 ORTHO05D004223 2.1e-06 55.5 74 51.4
DCAR_021565 Daucus carota HOM05D003549 ORTHO05D004223 4.7e-06 54.3 60 60.0
Os01g0273000 Oryza sativa ssp. japonica HOM05D003549 ORTHO05D004223 8.0e-06 53.5 73 49.3


User provided reference genes

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