Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 1.2e-39 166.0 84 100.0
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 4.0e-30 134.4 72 90.3
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 1.4e-27 125.9 82 75.6
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 2.7e-26 121.7 84 69.0
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 2.7e-26 121.7 84 69.0
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 1.7e-25 119.0 82 72.0
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 1.7e-25 119.0 82 72.0
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 3.9e-25 117.9 82 69.5
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 3.9e-25 117.9 84 70.2
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 6.6e-25 117.1 82 69.5
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 6.6e-25 117.1 82 68.3
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 8.6e-25 116.7 82 69.5
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 8.6e-25 116.7 82 68.3
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 1.5e-24 115.9 83 69.9
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 1.5e-24 115.9 82 69.5
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.9e-24 115.5 82 68.3
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.9e-24 115.5 82 68.3
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 4.3e-24 114.4 82 65.9
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 4.3e-24 114.4 84 67.9
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 4.3e-24 114.4 82 69.5
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 5.6e-24 114.0 82 67.1
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 5.6e-24 114.0 84 67.9
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 5.6e-24 114.0 82 67.1
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 7.3e-24 113.6 82 67.1
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 9.5e-24 113.2 82 67.1
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 9.5e-24 113.2 82 67.1
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 9.5e-24 113.2 83 71.1
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.2e-23 112.8 82 65.9
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 2.1e-23 112.1 82 67.1
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 2.1e-23 112.1 82 64.6
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 2.1e-23 112.1 82 69.5
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 2.8e-23 111.7 82 67.1
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 3.6e-23 111.3 82 65.9
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 4.7e-23 110.9 82 65.9
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 6.2e-23 110.5 82 65.9
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 1.1e-22 109.8 82 67.1
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.1e-22 109.8 82 64.6
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 1.4e-22 109.4 82 64.6
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 2.3e-22 108.6 81 65.4
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 2.3e-22 108.6 82 67.1
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.1e-22 108.2 82 65.9
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.1e-22 108.2 82 65.9
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 3.1e-22 108.2 82 65.9
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 3.1e-22 108.2 82 63.4
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 4.0e-22 107.8 82 64.6
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 4.0e-22 107.8 82 65.9
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 5.2e-22 107.5 82 65.9
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 6.8e-22 107.1 82 64.6
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 6.8e-22 107.1 82 65.9
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 6.8e-22 107.1 82 63.4
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 6.8e-22 107.1 82 62.2
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 6.8e-22 107.1 82 62.2
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 6.8e-22 107.1 82 65.9
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 8.9e-22 106.7 82 63.4
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 8.9e-22 106.7 82 63.4
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.2e-21 106.3 84 65.5
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 1.2e-21 106.3 82 65.9
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 1.2e-21 106.3 81 64.2
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 1.5e-21 105.9 82 61.0
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.5e-21 105.9 82 63.4
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.5e-21 105.9 82 63.4
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 1.5e-21 105.9 81 61.7
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 2.0e-21 105.5 82 63.4
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 2.6e-21 105.1 82 63.4
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 2.6e-21 105.1 82 64.6
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 2.6e-21 105.1 82 63.4
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 3.4e-21 104.8 85 62.4
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 4.4e-21 104.4 80 65.0
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 7.5e-21 103.6 81 61.7
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 7.5e-21 103.6 80 65.0
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 9.9e-21 103.2 82 61.0
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 1.7e-20 102.4 83 59.0
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 4.9e-20 100.9 80 63.8
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 1.1e-19 99.8 82 63.4
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 1.4e-19 99.4 82 57.3
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 1.4e-19 99.4 82 57.3
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.4e-19 98.6 82 62.2
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 2.4e-19 98.6 79 60.8
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 3.2e-19 98.2 82 58.5
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 3.2e-19 98.2 83 62.7
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.2e-19 98.2 83 62.7
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.2e-19 98.2 83 62.7
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 5.4e-19 97.4 81 60.5
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 5.4e-19 97.4 84 61.9
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 7.1e-19 97.1 81 60.5
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 9.2e-19 96.7 82 58.5
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 1.2e-18 96.3 83 61.4
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 2.1e-18 95.5 80 60.0
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.3e-17 92.0 68 67.6
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 1.1e-16 89.7 63 65.1
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 2.5e-16 88.6 63 66.7
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 5.6e-16 87.4 80 52.5
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 5.6e-16 87.4 80 52.5
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 7.3e-16 87.0 70 64.3
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 1.2e-15 86.3 80 51.2
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 1.2e-15 86.3 80 52.5
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 1.2e-15 86.3 80 52.5
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 1.2e-15 86.3 80 51.2
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 1.2e-15 86.3 83 47.0
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 2.1e-15 85.5 82 56.1
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 2.8e-15 85.1 72 61.1
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.6e-15 84.7 111 46.8
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 4.7e-15 84.3 63 60.3
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.0e-13 79.0 56 64.3
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 3.4e-13 78.2 67 59.7
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 1.6e-10 69.3 67 49.3
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 3.6e-07 58.2 50 54.0
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 8.1e-07 57.0 83 43.4


User provided reference genes

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