Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 2.1e-55 218.8 112 100.0
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 5.0e-28 127.9 92 68.5
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 5.0e-28 127.9 92 67.4
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 6.5e-28 127.5 92 69.6
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.1e-27 126.7 92 66.3
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 1.4e-27 126.3 89 67.4
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 2.5e-27 125.6 93 64.5
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 2.5e-27 125.6 103 58.3
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 2.5e-27 125.6 92 66.3
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 3.2e-27 125.2 90 66.7
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 3.2e-27 125.2 96 64.6
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 5.5e-27 124.4 89 67.4
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 5.5e-27 124.4 89 67.4
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 7.2e-27 124.0 92 63.0
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 7.2e-27 124.0 92 63.0
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 9.4e-27 123.6 89 66.3
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 1.2e-26 123.2 89 68.5
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 1.2e-26 123.2 89 66.3
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 1.2e-26 123.2 100 63.0
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 1.6e-26 122.9 90 63.3
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 2.1e-26 122.5 100 60.0
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 2.1e-26 122.5 100 60.0
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 2.1e-26 122.5 95 63.2
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 2.7e-26 122.1 95 63.2
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 4.7e-26 121.3 95 63.2
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 4.7e-26 121.3 100 60.0
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 4.7e-26 121.3 100 60.0
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 4.7e-26 121.3 95 63.2
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 6.1e-26 120.9 99 60.6
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 6.1e-26 120.9 95 62.1
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 8.0e-26 120.6 89 64.0
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 8.0e-26 120.6 89 64.0
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 8.0e-26 120.6 95 62.1
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 8.0e-26 120.6 90 65.6
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 8.0e-26 120.6 88 64.8
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 1.0e-25 120.2 88 65.9
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.0e-25 120.2 90 65.6
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 1.0e-25 120.2 90 64.4
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 1.0e-25 120.2 93 64.5
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 1.4e-25 119.8 90 64.4
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 1.8e-25 119.4 89 64.0
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 1.8e-25 119.4 92 64.1
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 1.8e-25 119.4 95 62.1
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.3e-25 119.0 100 59.0
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 3.0e-25 118.6 91 63.7
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.0e-25 118.6 95 64.2
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 3.0e-25 118.6 95 62.1
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.9e-25 118.2 103 58.3
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.9e-25 118.2 103 58.3
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 3.9e-25 118.2 95 61.1
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 5.2e-25 117.9 92 60.9
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 5.2e-25 117.9 95 62.1
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 5.2e-25 117.9 92 63.0
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 8.8e-25 117.1 95 60.0
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 1.5e-24 116.3 90 63.3
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 1.5e-24 116.3 93 61.3
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 2.0e-24 115.9 87 63.2
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.0e-24 115.9 93 62.4
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 2.6e-24 115.5 96 59.4
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 2.6e-24 115.5 95 60.0
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 3.3e-24 115.2 92 62.0
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 3.3e-24 115.2 96 60.4
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 4.4e-24 114.8 89 64.0
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 4.4e-24 114.8 92 59.8
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.4e-24 114.8 92 58.7
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 4.4e-24 114.8 88 63.6
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 5.7e-24 114.4 81 67.9
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 5.7e-24 114.4 96 59.4
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 5.7e-24 114.4 89 60.7
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 1.3e-23 113.2 95 56.8
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 1.7e-23 112.8 95 57.9
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 2.2e-23 112.5 88 61.4
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 4.8e-23 111.3 97 53.6
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 4.8e-23 111.3 95 54.7
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 6.3e-23 110.9 84 65.5
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 8.2e-23 110.5 90 60.0
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 1.4e-22 109.8 94 54.3
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.8e-22 109.4 85 63.5
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 1.8e-22 109.4 96 55.2
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 2.4e-22 109.0 94 53.2
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 7.0e-22 107.5 96 55.2
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 9.1e-22 107.1 89 60.7
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 9.1e-22 107.1 84 59.5
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.2e-21 106.7 79 64.6
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 2.0e-21 105.9 91 57.1
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.6e-21 105.5 83 59.0
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 3.5e-21 105.1 83 62.7
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 3.5e-21 105.1 89 55.1
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 1.0e-20 103.6 79 63.3
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 1.0e-20 103.6 80 61.2
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.9e-20 102.1 89 56.2
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 5.0e-20 101.3 89 53.9
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 8.5e-20 100.5 81 59.3
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 1.1e-19 100.1 94 53.2
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 1.5e-19 99.8 75 60.0
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 9.4e-19 97.1 75 66.7
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 1.6e-18 96.3 76 64.5
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.6e-18 95.1 74 64.9
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 6.1e-18 94.4 77 59.7
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 1.8e-17 92.8 74 58.1
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 1.8e-17 92.8 74 58.1
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 3.0e-17 92.0 83 51.8
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 4.0e-17 91.7 72 59.7
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 4.0e-17 91.7 72 59.7
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 4.0e-17 91.7 72 59.7
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 1.2e-16 90.1 71 59.2
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 2.0e-16 89.4 71 59.2
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 2.0e-16 89.4 73 57.5
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 2.0e-16 89.4 71 59.2
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 2.0e-16 89.4 73 57.5
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 2.0e-16 89.4 63 65.1
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 4.4e-16 88.2 53 73.6
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 7.5e-16 87.4 73 54.8
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 7.5e-16 87.4 87 49.4
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 9.7e-16 87.0 69 65.2
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 2.2e-15 85.9 59 67.8
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.2e-15 85.9 59 67.8
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 7.0e-14 80.9 88 52.3
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 9.1e-14 80.5 53 66.0
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 2.7e-13 79.0 87 44.8
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 1.0e-12 77.0 60 61.7
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.3e-12 76.6 53 60.4
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.3e-12 76.6 53 60.4
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 1.3e-12 76.6 71 46.5
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 2.2e-12 75.9 78 46.2
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 6.1e-10 67.8 46 63.0
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 2.0e-08 62.8 79 39.2
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 9.8e-08 60.5 41 70.7


User provided reference genes

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