Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0022 Ceratophyllum demersum HOM05D004838 ORTHO05D005373 8.7e-50 199.9 95 100.0
CDE05G2085 Ceratophyllum demersum HOM05D004838 ORTHO05D005373 1.5e-38 162.5 78 98.7
CDE05G0592 Ceratophyllum demersum HOM05D004838 ORTHO05D005373 2.5e-28 128.6 79 79.7
MBI02_g13229_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 2.0e-17 92.4 88 51.1
Nn1g03874 Nelumbo nucifera HOM05D004838 ORTHO05D005373 1.7e-16 89.4 87 50.6
Nn1g06781 Nelumbo nucifera HOM05D004838 ORTHO05D005373 2.2e-16 89.0 85 54.1
TAR629G1266 Trochodendron aralioides HOM05D004838 ORTHO05D005373 1.2e-14 83.2 88 46.6
Atru.chr6.3079 Acer truncatum HOM05D004838 ORTHO05D005373 4.5e-14 81.3 85 47.1
Nn2g11248 Nelumbo nucifera HOM05D004838 ORTHO05D005373 5.9e-14 80.9 85 47.1
Psat5g269720 Pisum sativum HOM05D004838 ORTHO05D005373 5.9e-14 80.9 85 43.5
Ca_01537_v3 Cicer arietinum L. HOM05D004838 ORTHO05D005373 7.7e-14 80.5 86 46.5
Cfa014541 Carpinus fangiana HOM05D004838 ORTHO05D005373 8.6e-13 77.0 88 42.0
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 8.6e-13 77.0 88 43.2
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 1.5e-12 76.3 88 40.9
MD17G1084900 Malus domestica HOM05D004838 ORTHO05D005373 1.5e-12 76.3 89 42.7
Medtr2g090020 Medicago truncatula HOM05D004838 ORTHO05D005373 1.5e-12 76.3 85 43.5
Nitab4.5_0002791g0020 Nicotiana tabacum HOM05D004838 ORTHO05D005373 2.5e-12 75.5 92 46.7
Psat5g269560 Pisum sativum HOM05D004838 ORTHO05D005373 2.5e-12 75.5 85 42.4
Psat5g269640 Pisum sativum HOM05D004838 ORTHO05D005373 2.5e-12 75.5 85 42.4
Glyma.12G201000 Glycine max HOM05D004838 ORTHO05D005373 7.2e-12 73.9 89 41.6
Phvul.005G107800 Phaseolus vulgaris HOM05D004838 ORTHO05D005373 7.2e-12 73.9 90 42.2
Nitab4.5_0010094g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 9.5e-12 73.6 92 45.7
Prupe.3G230300 Prunus persica HOM05D004838 ORTHO05D005373 9.5e-12 73.6 86 44.2
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 2.1e-11 72.4 89 41.6
Cc05_g06190 Coffea canephora HOM05D004838 ORTHO05D005373 2.1e-11 72.4 88 43.2
Lsat_1_v5_gn_3_40041 Lactuca sativa HOM05D004838 ORTHO05D005373 2.1e-11 72.4 85 41.2
Lalb_Chr14g0366611 Lupinus albus HOM05D004838 ORTHO05D005373 2.8e-11 72.0 88 39.8
Glyma.13G301200 Glycine max HOM05D004838 ORTHO05D005373 4.7e-11 71.2 89 39.3
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 4.7e-11 71.2 90 42.2
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 6.1e-11 70.9 88 45.5
MD09G1096600 Malus domestica HOM05D004838 ORTHO05D005373 8.0e-11 70.5 81 49.4
Medtr2g090010 Medicago truncatula HOM05D004838 ORTHO05D005373 8.0e-11 70.5 86 43.0
TAR627G0102 Trochodendron aralioides HOM05D004838 ORTHO05D005373 8.0e-11 70.5 76 44.7
Hma1.2p1_0565F.1_g179630 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 1.4e-10 69.7 99 39.4
Rhsim04G0062900 Rhododendron simsii HOM05D000831 ORTHO05D005373 1.8e-10 69.3 83 39.8
TPR.G27093 Trifolium pratense HOM05D004838 ORTHO05D005373 1.8e-10 69.3 85 41.2
Haze_13080 Corylus avellana HOM05D004838 ORTHO05D005373 2.3e-10 68.9 83 41.0
Ciclev10017352m.g Citrus clementina HOM05D004838 ORTHO05D005373 5.2e-10 67.8 86 41.9
Lj3g0009480 Lotus japonicus HOM05D004838 ORTHO05D005373 5.2e-10 67.8 85 44.7
ClCG02G001310 Citrullus lanatus HOM05D004838 ORTHO05D005373 6.8e-10 67.4 88 39.8
Psat5g269520 Pisum sativum HOM05D004838 ORTHO05D005373 6.8e-10 67.4 85 40.0
Rhsim06G0152400 Rhododendron simsii HOM05D004838 ORTHO05D005373 1.2e-09 66.6 85 38.8
Eucgr.K00912 Eucalyptus grandis HOM05D004838 ORTHO05D005373 1.5e-09 66.2 90 36.7
TWI36G0547 Tripterygium wilfordii HOM05D004838 ORTHO05D005373 1.5e-09 66.2 88 39.8
Lsat_1_v5_gn_3_40321 Lactuca sativa HOM05D004838 ORTHO05D005373 2.0e-09 65.9 87 42.5
ECA246G4438 Erigeron canadensis HOM05D004838 ORTHO05D005373 3.4e-09 65.1 81 38.3
Gohir.A01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 3.4e-09 65.1 86 39.5
Lsat_1_v5_gn_3_40461 Lactuca sativa HOM05D004838 ORTHO05D005373 3.4e-09 65.1 85 42.4
Lsat_1_v5_gn_4_68580 Lactuca sativa HOM05D004838 ORTHO05D005373 3.4e-09 65.1 85 41.2
Medtr2g090015 Medicago truncatula HOM05D004838 ORTHO05D005373 3.4e-09 65.1 87 42.5
Sed0027638 Sechium edule HOM05D004838 ORTHO05D005373 4.4e-09 64.7 88 38.6
Thecc.02G170800 Theobroma cacao HOM05D000831 ORTHO05D000660 4.4e-09 64.7 82 42.7
CSS0025457 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.3e-08 63.2 93 36.6
Cpa.g.sc34.87 Carica papaya HOM05D004838 ORTHO05D005373 1.3e-08 63.2 92 41.3
MELO3C018765.2 Cucumis melo HOM05D004838 ORTHO05D005373 1.3e-08 63.2 88 37.5
CsaV3_7G004130 Cucumis sativus L. HOM05D004838 ORTHO05D005373 1.3e-08 63.2 88 37.5
Sed0001014 Sechium edule HOM05D004838 ORTHO05D005373 1.3e-08 63.2 88 38.6
Actinidia09904 Actinidia chinensis HOM05D004838 ORTHO05D005373 2.2e-08 62.4 90 42.2
Lsat_1_v5_gn_3_40341 Lactuca sativa HOM05D004838 ORTHO05D005373 2.2e-08 62.4 87 41.4
PGSC0003DMG400018373 Solanum tuberosum HOM05D004838 ORTHO05D005373 2.2e-08 62.4 91 40.7
CSS0009105 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 2.8e-08 62.0 94 39.4
Dinv13826 Davidia involucrata HOM05D004838 ORTHO05D005373 2.8e-08 62.0 103 40.8
Manes.13G151900 Manihot esculenta HOM05D004838 ORTHO05D005373 2.8e-08 62.0 88 38.6
Sabra19G0117300 Salix brachista HOM05D004838 ORTHO05D005373 2.8e-08 62.0 89 39.3
Sabra19G0136400 Salix brachista HOM05D004838 ORTHO05D005373 2.8e-08 62.0 89 39.3
Solyc07g054730.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 3.7e-08 61.6 89 41.6
Sopen07g028660 Solanum pennellii HOM05D004838 ORTHO05D005373 3.7e-08 61.6 89 41.6
Migut.H01017 Erythranthe guttata HOM05D004838 ORTHO05D005373 4.9e-08 61.2 85 41.2
Migut.M00337 Erythranthe guttata HOM05D004838 ORTHO05D005373 4.9e-08 61.2 89 37.1
Potri.013G147700 Populus trichocarpa HOM05D004838 ORTHO05D005373 4.9e-08 61.2 89 39.3
Gohir.D01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 6.3e-08 60.8 86 38.4
Lsat_1_v5_gn_3_40080 Lactuca sativa HOM05D004838 ORTHO05D005373 6.3e-08 60.8 86 38.4
QL08p037147 Quercus lobata HOM05D004838 ORTHO05D005373 6.3e-08 60.8 83 37.3
Migut.H01015 Erythranthe guttata HOM05D004838 ORTHO05D005373 1.4e-07 59.7 86 39.5
Gorai.002G017000 Gossypium raimondii HOM05D004838 ORTHO05D005373 1.8e-07 59.3 86 38.4
Manes.12G082700 Manihot esculenta HOM05D004838 ORTHO05D005373 1.8e-07 59.3 88 38.6
Potri.019G116300 Populus trichocarpa HOM05D004838 ORTHO05D005373 1.8e-07 59.3 89 40.4
ATR0852G001 Amborella trichopoda HOM05D004838 ORTHO05D005373 3.1e-07 58.5 84 40.5
DCAR_012975 Daucus carota HOM05D004838 ORTHO05D005373 3.1e-07 58.5 91 39.6
Gohir.D05G169000 Gossypium hirsutum HOM05D004838 ORTHO05D005373 3.1e-07 58.5 85 34.1
FAN02G3359 Fragaria x ananassa HOM05D004838 ORTHO05D005373 4.1e-07 58.2 88 39.8
Thecc.02G171400 Theobroma cacao HOM05D004838 ORTHO05D005373 4.1e-07 58.2 86 36.0
CSS0022159 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 5.4e-07 57.8 83 38.6
CSS0036889 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 5.4e-07 57.8 92 34.8
Migut.H01016 Erythranthe guttata HOM05D004838 ORTHO05D005373 7.0e-07 57.4 88 35.2
CDE02G2086 Ceratophyllum demersum HOM05D001554 ORTHO05D001481 9.2e-07 57.0 84 34.5
COL.COLO4_13681 Corchorus olitorius HOM05D004838 ORTHO05D005373 1.2e-06 56.6 86 34.9
Gorai.009G174200 Gossypium raimondii HOM05D004838 ORTHO05D005373 1.2e-06 56.6 85 34.1
THA.LOC104804066 Tarenaya hassleriana HOM05D004838 ORTHO05D005373 1.2e-06 56.6 94 34.0
HanXRQChr17g0542271 Helianthus annuus HOM05D000831 ORTHO05D000660 1.6e-06 56.2 83 37.3
Sabra19G0117500 Salix brachista HOM05D000831 ORTHO05D000660 1.6e-06 56.2 84 36.9
Haze_06585 Corylus avellana HOM05D004838 ORTHO05D005373 2.0e-06 55.8 85 32.9
FAN05G2643 Fragaria x ananassa HOM05D004838 ORTHO05D005373 2.0e-06 55.8 88 38.6
Sabra19G0135900 Salix brachista HOM05D000831 ORTHO05D000660 2.0e-06 55.8 83 39.8
TAR627G0747 Trochodendron aralioides HOM05D000831 ORTHO05D000660 2.0e-06 55.8 88 40.9
CSS0031952 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 2.7e-06 55.5 93 33.3
Dinv15499 Davidia involucrata HOM05D000831 ORTHO05D000660 2.7e-06 55.5 83 39.8
Lsat_1_v5_gn_3_40141 Lactuca sativa HOM05D004838 ORTHO05D005373 2.7e-06 55.5 85 36.5
Lsat_1_v5_gn_3_40521 Lactuca sativa HOM05D000831 ORTHO05D000660 2.7e-06 55.5 83 38.6
Nn1g07826 Nelumbo nucifera HOM05D000831 ORTHO05D000660 2.7e-06 55.5 83 37.3
AL7G24360 Arabidopsis lyrata HOM05D004838 ORTHO05D005373 3.5e-06 55.1 88 35.2
AT4G28240 Arabidopsis thaliana HOM05D004838 ORTHO05D005373 3.5e-06 55.1 88 35.2
Dinv13827 Davidia involucrata HOM05D000831 ORTHO05D000660 3.5e-06 55.1 83 37.3
Gohir.A05G166000 Gossypium hirsutum HOM05D004838 ORTHO05D005373 3.5e-06 55.1 85 32.9
Potri.019G116932 Populus trichocarpa HOM05D000831 ORTHO05D000660 3.5e-06 55.1 84 41.7
Potri.019G117100 Populus trichocarpa HOM05D000831 ORTHO05D000660 3.5e-06 55.1 84 41.7
CSS0048593 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 4.5e-06 54.7 83 37.3
COL.COLO4_13653 Corchorus olitorius HOM05D000831 ORTHO05D000660 4.5e-06 54.7 77 39.0
QL05p081093 Quercus lobata HOM05D004838 ORTHO05D005373 4.5e-06 54.7 85 36.5
Sabra19G0117800 Salix brachista HOM05D000831 ORTHO05D000660 4.5e-06 54.7 83 38.6
Sabra19G0136000 Salix brachista HOM05D000831 ORTHO05D000660 4.5e-06 54.7 83 38.6
Sc21g0002510 Simmondsia chinensis HOM05D004838 ORTHO05D005373 4.5e-06 54.7 85 40.0
Thecc.06G200800 Theobroma cacao HOM05D004838 ORTHO05D005373 4.5e-06 54.7 86 36.0
CSS0007475 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 5.9e-06 54.3 84 39.3
CSS0018979 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 5.9e-06 54.3 83 36.1
Thhalv10026689m.g Eutrema salsugineum HOM05D004838 ORTHO05D005373 5.9e-06 54.3 86 34.9
Potri.019G116600 Populus trichocarpa HOM05D000831 ORTHO05D000660 5.9e-06 54.3 83 38.6
Sc21g0002500 Simmondsia chinensis HOM05D004838 ORTHO05D005373 5.9e-06 54.3 85 40.0
Sc21g0002520 Simmondsia chinensis HOM05D004838 ORTHO05D005373 5.9e-06 54.3 85 41.2
TAR629G0014 Trochodendron aralioides HOM05D000831 ORTHO05D000660 5.9e-06 54.3 83 42.2
CSS0009600 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 7.8e-06 53.9 95 32.6
CSS0015806 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 7.8e-06 53.9 83 36.1
CSS0040678 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 7.8e-06 53.9 83 37.3
CSS0047300 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 7.8e-06 53.9 83 37.3
Potri.019G117500 Populus trichocarpa HOM05D000831 ORTHO05D000660 7.8e-06 53.9 83 38.6
Sabra19G0118000 Salix brachista HOM05D000831 ORTHO05D000660 7.8e-06 53.9 83 38.6


User provided reference genes

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