Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 6.2e-73 277.3 137 100.0
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 1.6e-23 113.2 130 50.0
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 1.6e-20 103.2 131 51.1
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 1.0e-19 100.5 134 46.3
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 1.8e-19 99.8 136 45.6
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 8.8e-19 97.4 68 70.6
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 1.2e-18 97.1 66 72.7
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 2.6e-18 95.9 65 72.3
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 2.6e-18 95.9 76 65.8
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 7.5e-18 94.4 71 67.6
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 1.3e-17 93.6 84 66.7
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 2.2e-17 92.8 95 57.9
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 2.8e-17 92.4 70 67.1
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 3.7e-17 92.0 71 67.6
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 3.7e-17 92.0 71 67.6
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 4.8e-17 91.7 71 67.6
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 6.3e-17 91.3 100 52.0
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 6.3e-17 91.3 117 51.3
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 6.3e-17 91.3 63 69.8
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 8.3e-17 90.9 61 73.8
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 8.3e-17 90.9 83 60.2
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.8e-16 89.7 128 46.9
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 1.8e-16 89.7 90 55.6
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 2.4e-16 89.4 61 72.1
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 2.4e-16 89.4 61 70.5
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 2.4e-16 89.4 61 70.5
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 2.4e-16 89.4 61 70.5
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 2.4e-16 89.4 67 65.7
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 2.4e-16 89.4 63 66.7
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 3.1e-16 89.0 128 46.9
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 3.1e-16 89.0 78 62.8
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 4.1e-16 88.6 128 46.1
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 4.1e-16 88.6 80 61.2
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 4.1e-16 88.6 71 66.2
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 5.3e-16 88.2 61 70.5
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 5.3e-16 88.2 61 70.5
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 5.3e-16 88.2 71 64.8
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 5.3e-16 88.2 76 60.5
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 5.3e-16 88.2 79 59.5
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 5.3e-16 88.2 64 67.2
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 7.0e-16 87.8 73 63.0
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 7.0e-16 87.8 80 61.2
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 7.0e-16 87.8 68 72.1
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 9.1e-16 87.4 61 70.5
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 9.1e-16 87.4 61 70.5
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 9.1e-16 87.4 61 70.5
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 9.1e-16 87.4 61 70.5
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 9.1e-16 87.4 143 43.4
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 9.1e-16 87.4 81 60.5
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 1.2e-15 87.0 49 79.6
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 1.2e-15 87.0 73 60.3
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 1.2e-15 87.0 49 79.6
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 1.2e-15 87.0 80 60.0
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 1.2e-15 87.0 67 64.2
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 1.2e-15 87.0 105 49.5
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 1.2e-15 87.0 49 81.6
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 1.6e-15 86.7 49 79.6
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 1.6e-15 86.7 91 54.9
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 2.0e-15 86.3 106 45.3
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 2.0e-15 86.3 45 86.7
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 2.0e-15 86.3 93 50.5
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 3.5e-15 85.5 49 77.6
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 3.5e-15 85.5 49 77.6
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 3.5e-15 85.5 129 45.0
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 3.5e-15 85.5 45 84.4
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 4.5e-15 85.1 45 84.4
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 4.5e-15 85.1 138 43.5
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 5.9e-15 84.7 123 47.2
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 5.9e-15 84.7 62 66.1
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 7.7e-15 84.3 45 86.7
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 7.7e-15 84.3 100 51.0
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 1.0e-14 84.0 90 50.0
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 1.0e-14 84.0 49 77.6
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 2.2e-14 82.8 45 82.2
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 3.8e-14 82.0 127 42.5
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 3.8e-14 82.0 76 60.5
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 3.8e-14 82.0 46 78.3
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 3.8e-14 82.0 45 82.2
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 5.0e-14 81.6 110 42.7
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 6.5e-14 81.3 82 48.8
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 6.5e-14 81.3 47 76.6
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 8.5e-14 80.9 45 77.8
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 8.5e-14 80.9 70 58.6
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 1.1e-13 80.5 45 80.0
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 1.5e-13 80.1 129 41.1
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.5e-13 80.1 45 80.0
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 1.5e-13 80.1 44 79.5
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 1.5e-13 80.1 44 79.5
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 1.9e-13 79.7 47 74.5
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 5.5e-13 78.2 45 80.0
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 7.2e-13 77.8 76 52.6
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 9.4e-13 77.4 132 40.9
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.2e-12 77.0 105 45.7
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 3.6e-12 75.5 93 46.2
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 4.7e-12 75.1 105 43.8
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 3.7e-09 65.5 50 66.0
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 1.6e-07 60.1 46 60.9
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 2.0e-07 59.7 75 45.3
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 5.0e-06 55.1 25 96.0
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 6.6e-06 54.7 74 43.2


User provided reference genes

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