Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 1.1e-278 962.6 489 100.0
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 7.0e-151 538.1 525 56.6
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 2.0e-145 520.0 515 56.5
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 4.4e-137 492.3 491 53.6
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 7.5e-137 491.5 529 51.6
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 2.8e-136 489.6 525 51.0
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 1.8e-135 486.9 541 49.9
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 1.5e-132 477.2 528 49.6
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 5.6e-132 475.3 527 49.7
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 7.3e-132 474.9 533 49.7
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 1.6e-131 473.8 494 52.8
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 3.0e-130 469.5 497 50.5
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 4.0e-130 469.2 527 50.3
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 4.0e-130 469.2 527 50.3
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 8.9e-130 468.0 529 49.1
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 2.6e-129 466.5 527 48.8
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 4.4e-129 465.7 528 48.3
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 2.2e-128 463.4 528 48.1
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 2.2e-128 463.4 462 53.0
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 1.1e-127 461.1 492 50.0
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.4e-127 459.9 527 49.5
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 4.1e-127 459.1 456 52.0
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 7.0e-127 458.4 521 48.6
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 2.0e-126 456.8 463 51.6
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 2.7e-126 456.4 530 46.6
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 3.5e-126 456.1 527 49.3
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 4.6e-126 455.7 474 50.0
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 5.9e-126 455.3 515 48.5
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 2.3e-125 453.4 524 48.3
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 3.0e-125 453.0 517 48.9
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 3.0e-125 453.0 522 48.1
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 6.6e-125 451.8 488 50.2
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 8.6e-125 451.4 516 49.4
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 1.5e-124 450.7 524 47.7
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 2.5e-124 449.9 524 47.3
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 9.5e-124 448.0 516 49.2
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 2.1e-123 446.8 491 49.1
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 2.8e-123 446.4 486 49.2
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 6.2e-123 445.3 442 53.8
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.0e-122 444.5 481 49.3
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 6.8e-122 441.8 498 48.8
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 6.8e-122 441.8 504 48.6
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 1.5e-121 440.7 526 48.7
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 2.0e-121 440.3 503 48.3
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 7.5e-121 438.3 456 50.2
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 9.8e-121 438.0 531 46.5
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 9.8e-121 438.0 482 48.1
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 1.3e-120 437.6 507 47.3
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 4.9e-120 435.6 457 51.4
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 8.3e-120 434.9 436 52.1
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 1.4e-119 434.1 525 47.0
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 5.4e-119 432.2 479 47.8
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 7.0e-119 431.8 509 45.8
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 7.0e-119 431.8 530 47.0
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 2.7e-118 429.9 460 50.4
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.0e-117 427.9 448 50.7
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 3.0e-117 426.4 464 50.2
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 5.0e-117 425.6 528 46.0
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 8.6e-117 424.9 527 45.5
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.5e-116 424.1 444 50.5
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 1.5e-116 424.1 471 49.3
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 1.9e-116 423.7 489 48.7
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 1.9e-116 423.7 489 48.7
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 2.5e-116 423.3 469 48.6
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 3.3e-116 422.9 488 47.7
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 5.6e-116 422.2 474 48.3
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 9.5e-116 421.4 522 45.6
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 4.7e-115 419.1 526 45.4
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 6.2e-115 418.7 510 45.3
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 1.1e-114 417.9 496 47.6
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 1.4e-114 417.5 523 45.3
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.4e-114 417.5 507 47.1
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 1.8e-114 417.2 471 49.3
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 1.2e-113 414.5 525 45.3
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 3.4e-113 412.9 534 43.6
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 7.5e-113 411.8 484 46.3
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.7e-112 410.6 448 47.8
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 2.2e-112 410.2 551 44.3
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 2.9e-112 409.8 490 46.3
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 2.9e-112 409.8 448 48.0
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.9e-112 409.8 448 48.0
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.7e-112 409.5 448 47.8
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.7e-112 409.5 448 47.8
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.7e-112 409.5 448 48.0
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.1e-111 407.9 498 44.8
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-110 404.4 457 46.6
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 1.0e-109 401.4 506 44.3
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 1.0e-109 401.4 481 45.7
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 9.5e-108 394.8 511 43.4
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 3.6e-107 392.9 479 45.7
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 8.9e-106 388.3 509 42.2
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 2.2e-104 383.6 466 45.5
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 7.1e-103 378.6 463 43.6
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.1e-103 378.6 424 46.2
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 6.0e-102 375.6 457 43.8
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 1.0e-101 374.8 457 43.5
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 3.9e-101 372.9 469 43.9
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 6.4e-96 355.5 427 44.3
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.9e-95 354.0 489 42.1
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 7.3e-92 342.0 333 50.2
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 3.0e-85 320.1 484 38.6
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 8.7e-85 318.5 444 40.1
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 4.3e-84 316.2 493 38.9
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 1.9e-79 300.8 423 39.0
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 7.1e-79 298.9 483 37.3
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 1.8e-77 294.3 311 47.9
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 6.0e-70 269.2 314 45.2
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 2.0e-49 201.1 575 26.8
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 1.9e-47 194.5 455 29.9
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 2.9e-40 170.6 304 35.2
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 8.2e-35 152.5 383 28.7
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 4.1e-26 123.6 518 22.4
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 2.7e-25 120.9 98 57.1
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 2.7e-25 120.9 98 57.1
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 1.9e-23 114.8 98 55.1


User provided reference genes

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