Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 9.1e-99 363.6 189 100.0
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 3.1e-62 242.3 146 90.4
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 1.2e-21 107.5 135 54.1
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 2.6e-21 106.3 145 48.3
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 7.6e-21 104.8 155 46.5
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 7.6e-21 104.8 171 43.3
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 4.9e-20 102.1 140 49.3
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 4.9e-20 102.1 140 49.3
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 4.9e-20 102.1 169 43.8
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 6.4e-20 101.7 140 47.9
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 1.4e-19 100.5 143 45.5
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 2.5e-19 99.8 149 45.6
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 5.5e-19 98.6 148 41.9
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 7.1e-19 98.2 152 44.7
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 9.3e-19 97.8 174 42.0
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.1e-18 96.7 142 45.8
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.7e-18 96.3 174 42.0
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 4.6e-18 95.5 148 41.2
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 6.0e-18 95.1 160 41.9
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 6.0e-18 95.1 142 41.5
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 7.9e-18 94.7 151 42.4
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 7.9e-18 94.7 172 41.9
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 7.9e-18 94.7 168 42.9
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 7.9e-18 94.7 135 44.4
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.0e-17 94.4 140 46.4
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 1.3e-17 94.0 150 41.3
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.3e-17 94.0 148 43.2
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 1.3e-17 94.0 137 47.4
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 1.8e-17 93.6 151 43.7
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.8e-17 93.6 147 44.2
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 1.8e-17 93.6 141 44.0
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.3e-17 93.2 147 43.5
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.0e-17 92.8 163 42.9
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 3.9e-17 92.4 142 43.7
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 3.9e-17 92.4 155 43.2
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 6.7e-17 91.7 164 42.7
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 6.7e-17 91.7 137 47.4
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 6.7e-17 91.7 164 42.7
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 6.7e-17 91.7 144 43.8
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 8.7e-17 91.3 137 47.4
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 8.7e-17 91.3 143 37.8
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 1.5e-16 90.5 140 40.0
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 2.5e-16 89.7 164 40.9
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.5e-16 89.7 163 43.6
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 2.5e-16 89.7 136 44.1
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 3.3e-16 89.4 160 40.0
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 3.3e-16 89.4 143 43.4
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 4.3e-16 89.0 160 40.0
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 7.4e-16 88.2 158 41.8
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 7.4e-16 88.2 149 43.6
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 9.6e-16 87.8 143 42.0
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 9.6e-16 87.8 154 42.2
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.3e-15 87.4 137 46.7
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 1.6e-15 87.0 155 43.2
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 1.6e-15 87.0 141 39.0
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.8e-15 86.3 142 40.1
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.7e-15 85.9 137 46.0
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 8.2e-15 84.7 137 43.1
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 8.2e-15 84.7 150 40.7
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 8.2e-15 84.7 145 46.9
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 8.2e-15 84.7 140 43.6
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 3.1e-14 82.8 163 38.0
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 3.1e-14 82.8 128 46.1
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 5.3e-14 82.0 146 39.0
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 5.3e-14 82.0 162 38.3
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 6.9e-14 81.6 109 43.1
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 6.9e-14 81.6 143 37.8
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 6.9e-14 81.6 137 42.3
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.2e-13 80.9 142 38.0
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 2.0e-13 80.1 127 46.5
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 2.6e-13 79.7 167 38.9
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 2.6e-13 79.7 141 41.1
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 3.4e-13 79.3 148 38.5
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 3.4e-13 79.3 140 37.9
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 3.4e-13 79.3 139 39.6
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 7.6e-13 78.2 166 34.3
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.7e-12 77.0 138 36.2
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 2.2e-12 76.6 145 37.9
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 3.8e-12 75.9 154 39.0
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 6.5e-12 75.1 110 42.7
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 6.5e-12 75.1 106 46.2
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 8.4e-12 74.7 156 36.5
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 8.4e-12 74.7 145 36.6
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 1.4e-11 73.9 109 44.0
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 2.5e-11 73.2 142 38.0
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 5.5e-11 72.0 137 36.5
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 9.3e-11 71.2 168 33.9
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 1.2e-10 70.9 155 37.4
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 1.6e-10 70.5 138 37.0
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 2.1e-10 70.1 142 37.3
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 2.7e-10 69.7 163 33.7
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 3.5e-10 69.3 154 37.7
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 4.6e-10 68.9 137 37.2
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 1.0e-09 67.8 177 32.8
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.0e-09 67.8 96 45.8
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.3e-09 67.4 99 47.5
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 1.8e-09 67.0 156 33.3
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 1.8e-09 67.0 109 41.3
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 2.3e-09 66.6 151 35.8
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 3.0e-09 66.2 135 36.3
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 3.9e-09 65.9 156 35.9
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 5.1e-09 65.5 97 44.3
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 8.7e-09 64.7 146 35.6
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 8.7e-09 64.7 134 35.1
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 1.5e-08 63.9 138 38.4
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.5e-08 63.9 102 44.1
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 1.9e-08 63.5 159 35.8
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 1.9e-08 63.5 103 39.8
Ah.11g050990 Amaranthus hybridus HOM05D005211 ORTHO05D006148 2.5e-08 63.2 139 34.5
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 2.5e-08 63.2 140 36.4
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 3.3e-08 62.8 139 37.4
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 5.7e-08 62.0 139 34.5
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 7.4e-08 61.6 138 35.5
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 9.7e-08 61.2 92 42.4
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 1.3e-07 60.8 140 34.3
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 2.2e-07 60.1 139 36.7
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 2.2e-07 60.1 139 36.7
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.8e-07 59.7 146 34.2
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 4.8e-07 58.9 140 37.9
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 8.2e-07 58.2 136 37.5
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 8.2e-07 58.2 140 37.1
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 8.2e-07 58.2 138 34.1
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 8.2e-07 58.2 138 34.1
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 1.1e-06 57.8 140 35.0
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 1.8e-06 57.0 136 34.6
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 2.4e-06 56.6 139 35.3
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 3.1e-06 56.2 98 37.8
TAR636G0825 Trochodendron aralioides HOM05D001624 ORTHO05D001530 4.1e-06 55.8 148 29.1
QL10p006175 Quercus lobata HOM05D000022 ORTHO05D006148 5.3e-06 55.5 118 33.1
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 6.9e-06 55.1 37 67.6


User provided reference genes

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