Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 3.2e-167 591.7 298 100.0
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 5.3e-93 345.1 310 58.1
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 1.0e-91 340.9 313 56.2
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 1.5e-84 317.0 309 52.8
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 4.5e-84 315.5 309 52.8
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 1.3e-83 313.9 317 53.6
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 1.7e-83 313.5 306 54.6
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 1.7e-83 313.5 309 54.4
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 2.9e-83 312.8 309 54.4
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 8.4e-83 311.2 317 52.7
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 8.4e-83 311.2 307 54.1
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 1.1e-82 310.8 291 55.7
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 1.1e-82 310.8 310 51.0
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 1.4e-82 310.5 309 52.1
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 1.4e-82 310.5 309 52.1
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.9e-82 310.1 317 52.4
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.9e-82 310.1 317 52.7
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 2.5e-82 309.7 316 52.5
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 5.5e-82 308.5 312 51.9
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 7.2e-82 308.1 309 51.1
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.6e-81 305.4 317 51.7
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 6.1e-81 305.1 317 52.1
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 7.9e-81 304.7 308 53.6
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 7.9e-81 304.7 315 52.1
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 1.0e-80 304.3 311 52.1
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 1.8e-80 303.5 307 52.1
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 2.3e-80 303.1 301 51.5
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 5.1e-80 302.0 301 54.8
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 3.3e-79 299.3 317 49.5
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 5.7e-79 298.5 310 49.4
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 9.7e-79 297.7 324 50.9
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 1.3e-78 297.4 310 50.6
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 1.6e-78 297.0 310 49.4
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 3.7e-78 295.8 301 50.2
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 6.3e-78 295.0 306 50.3
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 8.2e-78 294.7 315 51.4
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 1.4e-77 293.9 307 49.8
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 9.0e-77 291.2 301 50.5
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 2.0e-76 290.0 300 50.7
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 2.6e-76 289.7 312 51.6
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 1.3e-75 287.3 311 49.8
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 1.3e-75 287.3 311 49.8
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 2.2e-75 286.6 309 51.5
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 2.9e-75 286.2 300 50.3
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 5.0e-75 285.4 302 49.0
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 6.5e-75 285.0 314 48.7
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 6.5e-75 285.0 308 50.3
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 8.5e-75 284.6 302 49.3
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 8.5e-75 284.6 299 50.5
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 2.5e-74 283.1 299 48.8
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 3.2e-74 282.7 302 49.0
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 5.5e-74 282.0 303 48.2
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 7.2e-74 281.6 306 48.7
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 1.2e-73 280.8 303 48.5
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 1.6e-73 280.4 301 48.8
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 2.1e-73 280.0 301 48.8
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 7.9e-73 278.1 301 49.5
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 1.0e-72 277.7 312 49.7
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 2.3e-72 276.6 361 44.6
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 2.3e-72 276.6 302 49.3
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 3.0e-72 276.2 304 46.4
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 3.9e-72 275.8 302 48.3
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 5.1e-72 275.4 299 53.2
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 8.8e-72 274.6 302 47.7
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 2.0e-71 273.5 300 49.3
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 2.2e-70 270.0 346 44.5
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 2.8e-70 269.6 293 49.1
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 1.2e-68 264.2 433 38.8
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 1.5e-68 263.8 309 46.0
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 2.6e-68 263.1 292 46.9
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 3.8e-67 259.2 300 47.0
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 1.9e-66 256.9 280 51.1
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 4.2e-66 255.8 302 47.0
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 3.6e-65 252.7 308 44.2
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 3.6e-65 252.7 306 44.4
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 6.1e-65 251.9 305 45.2
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 5.2e-64 248.8 305 44.6
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 5.2e-64 248.8 305 44.6
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 5.7e-63 245.4 303 44.9
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 4.8e-62 242.3 355 42.0
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 1.1e-61 241.1 309 43.4
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 1.1e-61 241.1 303 43.6
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 1.4e-61 240.7 299 44.5
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 5.3e-61 238.8 303 42.2
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 7.0e-61 238.4 305 43.3
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 9.1e-61 238.0 303 42.6
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 1.1e-58 231.1 288 45.1
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 1.8e-56 223.8 291 42.6
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 3.3e-55 219.5 240 48.8
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 1.3e-54 217.6 330 38.5
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 1.1e-53 214.5 243 51.4
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.4e-53 214.2 275 46.5
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 5.3e-53 212.2 275 46.2
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 1.2e-52 211.1 257 47.9
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 8.5e-51 204.9 230 46.5
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 5.2e-48 195.7 208 55.3
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 2.0e-47 193.7 229 46.3
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 2.5e-42 176.8 240 41.7
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 7.2e-42 175.3 220 44.5
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 6.1e-41 172.2 248 41.1
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 1.6e-36 157.5 300 32.7
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 2.9e-35 153.3 177 46.3
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 4.6e-28 129.4 118 53.4
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 4.6e-28 129.4 237 37.6
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 8.0e-25 118.6 278 30.2
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 4.6e-20 102.8 68 69.1
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.9e-18 97.4 60 68.3
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 4.3e-18 96.3 63 61.9
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 5.6e-18 95.9 60 65.0
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 5.6e-18 95.9 65 66.2
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.2e-17 94.7 81 55.6
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 1.5e-10 71.2 63 57.1


User provided reference genes

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