Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1195 Ceratophyllum demersum HOM05D000198 ORTHO05D006356 7.5e-68 260.4 130 100.0
Nn4g25579 Nelumbo nucifera HOM05D000198 ORTHO05D006356 4.0e-61 238.0 129 87.6
MBI18_g32020_MAGBIO Magnolia biondii HOM05D000198 ORTHO05D006356 1.2e-60 236.5 129 88.4
Aqoxy5G02589 Aquilegia oxysepala HOM05D000198 ORTHO05D006356 3.5e-57 224.9 129 83.7
Duzib212G0663 Durio zibethinus HOM05D000198 ORTHO05D006356 2.3e-56 222.2 130 83.8
Gohir.A02G054100 Gossypium hirsutum HOM05D000198 ORTHO05D006356 5.0e-56 221.1 130 83.1
Gohir.D02G059100 Gossypium hirsutum HOM05D000198 ORTHO05D006356 1.1e-55 219.9 130 82.3
Gorai.005G066700 Gossypium raimondii HOM05D000198 ORTHO05D006356 1.1e-55 219.9 130 82.3
Prupe.1G118500 Prunus persica HOM05D000198 ORTHO05D006356 1.9e-55 219.2 130 80.0
EL10Ac3g05491 Beta vulgaris HOM05D000198 ORTHO05D006356 2.5e-55 218.8 129 82.2
Hund03122 Selenicereus undatus HOM05D000198 ORTHO05D006356 2.5e-55 218.8 129 82.2
Os07g0688800 Oryza sativa ssp. japonica HOM05D000198 ORTHO05D006356 3.3e-55 218.4 130 81.5
Sc25g0003270 Simmondsia chinensis HOM05D000198 ORTHO05D006356 7.2e-55 217.2 129 81.4
Dinv15183 Davidia involucrata HOM05D000198 ORTHO05D006356 1.6e-54 216.1 129 80.6
MD16G1154800 Malus domestica HOM05D000198 ORTHO05D006356 2.8e-54 215.3 130 80.0
CANSAT78G1506 Cannabis sativa HOM05D000198 ORTHO05D006356 4.7e-54 214.5 130 80.8
PGR004G0803 Punica granatum HOM05D000198 ORTHO05D006356 1.0e-53 213.4 130 80.8
vmacro08054 Vaccinium macrocarpon HOM05D000198 ORTHO05D006356 1.4e-53 213.0 129 79.8
MD13G1155400 Malus domestica HOM05D000198 ORTHO05D006356 2.3e-53 212.2 130 79.2
Atru.chr4.3011 Acer truncatum HOM05D000198 ORTHO05D006356 4.0e-53 211.5 130 78.5
PSO170G3445 Papaver somniferum HOM05D000198 ORTHO05D006356 4.0e-53 211.5 129 79.1
PSO357G0208 Papaver somniferum HOM05D000198 ORTHO05D006356 4.0e-53 211.5 129 79.1
FvH4_4g19600 Fragaria vesca HOM05D000198 ORTHO05D006356 6.8e-53 210.7 130 78.5
FAN12G3961 Fragaria x ananassa HOM05D000198 ORTHO05D006356 6.8e-53 210.7 130 78.5
Actinidia40374 Actinidia chinensis HOM05D000198 ORTHO05D006356 8.9e-53 210.3 129 78.3
FAN07G1118 Fragaria x ananassa HOM05D000198 ORTHO05D006356 8.9e-53 210.3 130 77.7
GSVIVG01035003001 Vitis vinifera HOM05D000198 ORTHO05D006356 8.9e-53 210.3 129 79.8
Eucgr.H04040 Eucalyptus grandis HOM05D000198 ORTHO05D006356 1.2e-52 209.9 130 77.7
Thecc.04G299600 Theobroma cacao HOM05D000198 ORTHO05D006356 1.5e-52 209.5 129 79.1
Manes.15G004800 Manihot esculenta HOM05D000198 ORTHO05D006356 2.6e-52 208.8 130 79.2
RcHm_v2.0_Chr4g0424861 Rosa chinensis HOM05D000198 ORTHO05D006356 2.6e-52 208.8 130 78.5
QL06p011923 Quercus lobata HOM05D000198 ORTHO05D006356 4.4e-52 208.0 130 77.7
Actinidia15605 Actinidia chinensis HOM05D000198 ORTHO05D006356 9.8e-52 206.8 129 78.3
Ciclev10004594m.g Citrus clementina HOM05D000198 ORTHO05D006356 1.7e-51 206.1 130 80.0
MELO3C021272.2 Cucumis melo HOM05D000198 ORTHO05D006356 1.7e-51 206.1 130 80.0
Haze_01293 Corylus avellana HOM05D000198 ORTHO05D006356 2.2e-51 205.7 130 76.2
ClCG06G004610 Citrullus lanatus HOM05D000198 ORTHO05D006356 2.8e-51 205.3 130 79.2
Lalb_Chr18g0058711 Lupinus albus HOM05D000198 ORTHO05D006356 2.8e-51 205.3 130 76.2
SalBow8G4861 Salvia bowleyana HOM05D000198 ORTHO05D006356 3.7e-51 204.9 129 76.7
Migut.G00054 Erythranthe guttata HOM05D000198 ORTHO05D006356 8.3e-51 203.8 129 76.0
CiPaw.02G075200 Carya illinoinensis HOM05D000198 ORTHO05D006356 1.1e-50 203.4 130 76.2
Rhsim04G0235300 Rhododendron simsii HOM05D000198 ORTHO05D006356 1.1e-50 203.4 129 76.7
Zm00001eb331300 Zea mays HOM05D000198 ORTHO05D006356 1.1e-50 203.4 129 75.2
ATR0796G341 Amborella trichopoda HOM05D000198 ORTHO05D006356 2.4e-50 202.2 129 74.4
CsaV3_6G022360 Cucumis sativus L. HOM05D000198 ORTHO05D006356 2.4e-50 202.2 130 77.7
Lj6g0007194 Lotus japonicus HOM05D000198 ORTHO05D006356 2.4e-50 202.2 130 75.4
Solyc12g099290.2 Solanum lycopersicum HOM05D000198 ORTHO05D006356 2.4e-50 202.2 128 76.6
Sopen12g033970 Solanum pennellii HOM05D000198 ORTHO05D006356 2.4e-50 202.2 128 76.6
CAN.G484.59 Capsicum annuum HOM05D000198 ORTHO05D006356 3.1e-50 201.8 128 75.0
TWI53G2032 Tripterygium wilfordii HOM05D000198 ORTHO05D006356 3.1e-50 201.8 130 77.7
Ah.13g071920 Amaranthus hybridus HOM05D000198 ORTHO05D006356 4.1e-50 201.4 123 81.3
MSTRG.10149 Avicennia marina HOM05D000198 ORTHO05D006356 7.0e-50 200.7 129 75.2
Glyma.17G033100 Glycine max HOM05D000198 ORTHO05D006356 9.2e-50 200.3 130 76.2
Lj4g0009022 Lotus japonicus HOM05D000198 ORTHO05D006356 9.2e-50 200.3 130 76.2
PGSC0003DMG400004698 Solanum tuberosum HOM05D000198 ORTHO05D006356 9.2e-50 200.3 128 75.8
A05p41390 Brassica napus HOM05D000198 ORTHO05D006356 1.2e-49 199.9 130 75.4
BraA05t22860Z Brassica rapa HOM05D000198 ORTHO05D006356 1.2e-49 199.9 130 75.4
Glyma.09G036000 Glycine max HOM05D000198 ORTHO05D006356 1.2e-49 199.9 130 73.8
Potri.008G106000 Populus trichocarpa HOM05D000198 ORTHO05D006356 1.2e-49 199.9 130 77.7
SEGI_38585 Sequoiadendron giganteum HOM05D000198 ORTHO05D006356 1.2e-49 199.9 129 74.4
VMungo1215G0804 Vigna mungo HOM05D000198 ORTHO05D006356 1.2e-49 199.9 130 76.2
Cc03_g00900 Coffea canephora HOM05D000198 ORTHO05D006356 2.0e-49 199.1 129 76.0
Aa31LG5G17230 Aethionema arabicum HOM05D000198 ORTHO05D006356 2.7e-49 198.7 130 75.4
C05p60610 Brassica napus HOM05D000198 ORTHO05D006356 3.5e-49 198.4 130 74.6
BolC5t34718H Brassica oleracea HOM05D000198 ORTHO05D006356 3.5e-49 198.4 130 74.6
Sp3g05630 Schrenkiella parvula HOM05D000198 ORTHO05D006356 3.5e-49 198.4 130 74.6
Thhalv10020345m.g Eutrema salsugineum HOM05D000198 ORTHO05D006356 4.5e-49 198.0 130 74.6
Phvul.003G113500 Phaseolus vulgaris HOM05D000198 ORTHO05D006356 4.5e-49 198.0 130 75.4
Glyma.07G240300 Glycine max HOM05D000198 ORTHO05D006356 5.9e-49 197.6 130 74.6
Glyma.15G140900 Glycine max HOM05D000198 ORTHO05D006356 5.9e-49 197.6 130 73.1
THA.LOC104818885 Tarenaya hassleriana HOM05D000198 ORTHO05D006356 1.0e-48 196.8 130 73.1
AL3G17750 Arabidopsis lyrata HOM05D000198 ORTHO05D006356 1.3e-48 196.4 130 73.8
AT3G66658 Arabidopsis thaliana HOM05D000198 ORTHO05D006356 1.3e-48 196.4 130 73.8
Carub.0003s0615 Capsella rubella HOM05D000198 ORTHO05D006356 1.7e-48 196.1 130 73.8
CARHR081220 Cardamine hirsuta HOM05D000198 ORTHO05D006356 1.7e-48 196.1 130 73.8
Psat1g161360 Pisum sativum HOM05D000198 ORTHO05D006356 1.7e-48 196.1 130 72.3
arahy.Tifrunner.gnm1.ann1.6QU7U5 Arachis hypogaea HOM05D000198 ORTHO05D006356 2.3e-48 195.7 130 73.1
arahy.Tifrunner.gnm1.ann1.F4QS6F Arachis hypogaea HOM05D000198 ORTHO05D006356 2.3e-48 195.7 130 73.1
Lsat_1_v5_gn_6_16801 Lactuca sativa HOM05D000198 ORTHO05D006356 3.9e-48 194.9 129 74.4
Lalb_Chr13g0298451 Lupinus albus HOM05D000198 ORTHO05D006356 3.9e-48 194.9 130 72.3
Nitab4.5_0002150g0150 Nicotiana tabacum HOM05D000198 ORTHO05D006356 8.6e-48 193.7 128 74.2
HanXRQChr13g0393411 Helianthus annuus HOM05D000198 ORTHO05D006356 1.5e-47 193.0 129 72.9
Cfa015321 Carpinus fangiana HOM05D000198 ORTHO05D006356 3.3e-47 191.8 129 72.9
Medtr2g034160 Medicago truncatula HOM05D000198 ORTHO05D006356 4.3e-47 191.4 130 70.0
Nitab4.5_0013613g0020 Nicotiana tabacum HOM05D000198 ORTHO05D006356 4.3e-47 191.4 128 73.4
Sabra10G0111400 Salix brachista HOM05D000198 ORTHO05D006356 4.3e-47 191.4 130 74.6
SGA_v2.0_scaffold104G30081 Striga asiatica HOM05D000198 ORTHO05D006356 4.3e-47 191.4 148 66.9
Ca_01850_v3 Cicer arietinum L. HOM05D000198 ORTHO05D006356 5.6e-47 191.0 130 70.8
TPR.G27261 Trifolium pratense HOM05D000198 ORTHO05D006356 7.3e-47 190.7 130 70.8
SHI00147 Sapria himalayana HOM05D000198 ORTHO05D006356 2.1e-46 189.1 130 73.1
Os07g0689150 Oryza sativa ssp. japonica HOM05D000198 ORTHO05D006356 2.0e-44 182.6 130 72.3
ECA233G5766 Erigeron canadensis HOM05D000198 ORTHO05D006356 3.4e-44 181.8 129 72.1
TWI73G1006 Tripterygium wilfordii HOM05D000198 ORTHO05D006356 1.2e-41 173.3 109 80.7
arahy.Tifrunner.gnm1.ann1.EEWD1J Arachis hypogaea HOM05D000198 ORTHO05D006356 6.0e-41 171.0 119 72.3
Peaxi162Scf00120g00020 Petunia axillaris HOM05D000198 ORTHO05D006356 4.3e-39 164.9 128 66.4
CSS0039927 Camellia sinensis var. sinensis HOM05D000198 ORTHO05D006356 7.3e-39 164.1 99 78.8
SGA_v2.0_scaffold263G46020 Striga asiatica HOM05D000198 ORTHO05D006356 3.2e-34 148.7 107 67.3
SGA_v2.0_scaffold97G29254 Striga asiatica HOM05D000198 ORTHO05D006356 3.2e-34 148.7 107 67.3
Lj4g0004127 Lotus japonicus HOM05D000198 ORTHO05D006356 9.2e-34 147.1 108 67.6
TAR636G3353 Trochodendron aralioides HOM05D000198 ORTHO05D006356 3.0e-32 142.1 77 84.4
Cpa.g.sc9.66 Carica papaya HOM05D000198 ORTHO05D006356 5.1e-32 141.4 100 68.0
SMO203G0073 Selaginella moellendorffii HOM05D000198 ORTHO05D006356 3.3e-31 138.7 123 57.7
RcHm_v2.0_Chr1g0319361 Rosa chinensis HOM05D000198 ORTHO05D006356 7.3e-31 137.5 93 73.1
Lj6A690G69 Lonicera japonica HOM05D000198 ORTHO05D006356 1.4e-29 133.3 94 69.1
arahy.Tifrunner.gnm1.ann1.CLI46N Arachis hypogaea HOM05D000198 ORTHO05D006356 4.4e-28 128.3 87 72.4
DCAR_002508 Daucus carota HOM05D000198 ORTHO05D006356 8.3e-27 124.0 69 82.6
AagrBONN_evm.TU.Sc2ySwM_117.3738 Anthoceros agrestis HOM05D000198 ORTHO05D006356 9.2e-26 120.6 130 50.8
BraA03t12659Z Brassica rapa HOM05D002471 ORTHO05D011298 1.2e-22 110.2 95 58.9
Lj6g0022295 Lotus japonicus HOM05D000198 ORTHO05D006356 1.4e-18 96.7 57 78.9
Sed0015207 Sechium edule HOM05D000198 ORTHO05D006356 4.6e-17 91.7 57 77.2
Cre01.g033350 Chlamydomonas reinhardtii HOM05D000198 ORTHO05D006356 6.2e-14 81.3 124 37.9
HPP92_001926 Vanilla planifolia HOM05D005498 ORTHO05D006356 2.4e-13 79.3 45 80.0
unitig_32.g10632 Utricularia gibba HOM05D000198 ORTHO05D006356 3.8e-11 72.0 44 77.3
PRCOL_00001219 Prasinoderma coloniale HOM05D000198 ORTHO05D006356 2.4e-10 69.3 104 37.5
AUR62039290 Chenopodium quinoa HOM05D000198 ORTHO05D006356 4.2e-10 68.6 41 82.9
MCO07G239 Micromonas commoda HOM05D000198 ORTHO05D006356 7.1e-10 67.8 124 34.7
AUR62016198 Chenopodium quinoa HOM05D000198 ORTHO05D006356 1.6e-09 66.6 39 84.6


User provided reference genes

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