Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 3.7e-51 204.5 100 100.0
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 1.7e-24 115.9 58 96.6
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 2.2e-19 99.0 58 77.6
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 2.2e-19 99.0 58 77.6
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 2.9e-19 98.6 64 70.3
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 3.8e-19 98.2 58 77.6
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 6.4e-19 97.4 58 75.9
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 8.4e-19 97.1 58 74.1
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 8.4e-19 97.1 58 75.9
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 8.4e-19 97.1 58 75.9
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 8.4e-19 97.1 58 74.1
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 8.4e-19 97.1 58 75.9
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 1.1e-18 96.7 54 79.6
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 1.1e-18 96.7 58 75.9
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 1.1e-18 96.7 58 77.6
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 1.1e-18 96.7 54 81.5
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 1.4e-18 96.3 58 74.1
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 1.4e-18 96.3 58 75.9
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 1.4e-18 96.3 58 74.1
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 1.4e-18 96.3 58 75.9
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.9e-18 95.9 58 74.1
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.9e-18 95.9 58 74.1
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 1.9e-18 95.9 58 75.9
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 1.9e-18 95.9 58 75.9
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 2.4e-18 95.5 58 72.4
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 2.4e-18 95.5 58 75.9
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 2.4e-18 95.5 58 77.6
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 3.2e-18 95.1 54 79.6
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 3.2e-18 95.1 58 74.1
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 4.2e-18 94.7 58 74.1
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 5.4e-18 94.4 58 74.1
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 5.4e-18 94.4 58 74.1
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 5.4e-18 94.4 58 72.4
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 7.1e-18 94.0 58 75.9
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 7.1e-18 94.0 58 74.1
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 7.1e-18 94.0 58 72.4
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 7.1e-18 94.0 58 74.1
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 7.1e-18 94.0 54 79.6
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 7.1e-18 94.0 58 72.4
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 9.3e-18 93.6 58 72.4
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 9.3e-18 93.6 58 74.1
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 9.3e-18 93.6 58 74.1
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 9.3e-18 93.6 58 70.7
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 9.3e-18 93.6 58 74.1
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 2.1e-17 92.4 67 68.7
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.1e-17 92.4 58 72.4
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 2.7e-17 92.0 58 72.4
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 2.7e-17 92.0 67 65.7
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 2.7e-17 92.0 67 65.7
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 3.5e-17 91.7 58 72.4
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 4.6e-17 91.3 58 70.7
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 4.6e-17 91.3 58 70.7
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 6.0e-17 90.9 58 72.4
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 6.0e-17 90.9 58 70.7
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 6.0e-17 90.9 58 70.7
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 6.0e-17 90.9 58 72.4
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 7.9e-17 90.5 58 70.7
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 7.9e-17 90.5 58 69.0
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 7.9e-17 90.5 67 65.7
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 1.0e-16 90.1 66 65.2
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 1.3e-16 89.7 58 69.0
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 1.3e-16 89.7 58 70.7
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.3e-16 89.7 67 64.2
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 3.0e-16 88.6 64 60.9
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 3.0e-16 88.6 58 70.7
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 3.0e-16 88.6 58 69.0
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 3.0e-16 88.6 60 68.3
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 3.0e-16 88.6 60 71.7
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 3.9e-16 88.2 58 69.0
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 3.9e-16 88.2 58 69.0
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 5.1e-16 87.8 55 80.0
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 1.1e-15 86.7 58 67.2
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 1.1e-15 86.7 61 65.6
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 1.5e-15 86.3 58 67.2
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 1.9e-15 85.9 58 67.2
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 1.9e-15 85.9 58 67.2
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 1.9e-15 85.9 58 67.2
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 1.9e-15 85.9 58 67.2
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 1.9e-15 85.9 58 67.2
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 2.5e-15 85.5 58 67.2
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 2.5e-15 85.5 58 67.2
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 5.6e-15 84.3 58 67.2
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 7.4e-15 84.0 52 75.0
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 7.4e-15 84.0 58 67.2
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 7.4e-15 84.0 51 76.5
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 9.6e-15 83.6 58 65.5
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 2.1e-14 82.4 62 66.1
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 4.8e-14 81.3 86 48.8
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 8.1e-14 80.5 64 65.6
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.1e-13 80.1 58 62.1
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 2.4e-13 79.0 58 63.8
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 1.9e-10 69.3 58 56.9
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 4.2e-10 68.2 43 79.1
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 1.0e-08 63.5 58 48.3
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 6.7e-08 60.8 51 49.0
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 5.7e-07 57.8 53 43.4
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 9.6e-07 57.0 60 53.3


User provided reference genes

Program Settings