Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 1.4e-126 456.8 338 100.0
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 1.3e-34 151.4 117 61.5
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 1.7e-34 151.0 126 56.3
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 2.8e-34 150.2 130 56.9
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 1.1e-33 148.3 127 57.5
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 1.8e-33 147.5 130 55.4
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 3.1e-33 146.7 114 61.4
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 5.3e-33 146.0 112 61.6
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 7.0e-33 145.6 114 58.8
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 1.2e-32 144.8 120 58.3
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 1.2e-32 144.8 120 59.2
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 2.6e-32 143.7 128 57.8
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 5.9e-32 142.5 117 57.3
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 5.9e-32 142.5 117 57.3
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 1.0e-31 141.7 120 57.5
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 1.3e-31 141.4 115 58.3
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 1.3e-31 141.4 116 59.5
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 1.3e-31 141.4 114 57.9
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 2.2e-31 140.6 120 58.3
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 2.2e-31 140.6 125 55.2
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 2.9e-31 140.2 133 54.9
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.9e-31 140.2 130 54.6
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 3.8e-31 139.8 116 57.8
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 3.8e-31 139.8 130 54.6
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 3.8e-31 139.8 117 56.4
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 5.0e-31 139.4 129 57.4
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 5.0e-31 139.4 112 58.9
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 6.5e-31 139.0 116 56.0
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 6.5e-31 139.0 114 56.1
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 8.5e-31 138.7 129 55.0
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 8.5e-31 138.7 116 57.8
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 1.1e-30 138.3 124 54.0
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.5e-30 137.9 130 53.1
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 1.9e-30 137.5 135 52.6
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 1.9e-30 137.5 112 58.9
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.9e-30 137.5 116 57.8
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 1.9e-30 137.5 112 59.8
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 1.9e-30 137.5 117 55.6
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 2.5e-30 137.1 134 53.0
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 2.5e-30 137.1 117 54.7
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 2.5e-30 137.1 113 57.5
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 2.5e-30 137.1 339 42.2
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 3.2e-30 136.7 131 53.4
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 3.2e-30 136.7 117 54.7
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 3.2e-30 136.7 114 58.8
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 4.2e-30 136.3 112 57.1
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 4.2e-30 136.3 135 51.9
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 4.2e-30 136.3 111 58.6
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 5.5e-30 136.0 133 52.6
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 7.2e-30 135.6 116 55.2
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 9.4e-30 135.2 123 52.8
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 1.2e-29 134.8 129 51.9
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 1.2e-29 134.8 129 51.9
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 1.2e-29 134.8 129 51.9
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 1.2e-29 134.8 129 51.9
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 1.2e-29 134.8 129 51.9
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 1.2e-29 134.8 123 51.2
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 1.6e-29 134.4 343 37.6
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 2.1e-29 134.0 129 53.5
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 2.1e-29 134.0 118 56.8
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 2.1e-29 134.0 112 58.0
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 2.1e-29 134.0 122 54.9
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 2.1e-29 134.0 131 53.4
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 2.1e-29 134.0 140 49.3
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 2.1e-29 134.0 113 56.6
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 2.7e-29 133.7 112 56.2
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 4.7e-29 132.9 129 53.5
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 4.7e-29 132.9 128 50.8
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 6.1e-29 132.5 119 54.6
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 6.1e-29 132.5 354 47.5
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 6.1e-29 132.5 117 53.8
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 8.0e-29 132.1 120 55.0
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 8.0e-29 132.1 123 52.0
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 8.0e-29 132.1 129 54.3
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 8.0e-29 132.1 127 54.3
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 1.0e-28 131.7 120 54.2
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 1.0e-28 131.7 121 53.7
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 2.3e-28 130.6 115 52.2
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 4.0e-28 129.8 116 52.6
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 5.2e-28 129.4 118 55.9
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 5.2e-28 129.4 129 50.4
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 5.2e-28 129.4 117 52.1
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 5.2e-28 129.4 111 54.1
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 5.2e-28 129.4 131 51.1
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 5.2e-28 129.4 129 51.2
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 6.7e-28 129.0 125 51.2
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 6.7e-28 129.0 125 51.2
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 6.7e-28 129.0 125 51.2
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 6.7e-28 129.0 125 51.2
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 6.7e-28 129.0 125 51.2
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 6.7e-28 129.0 111 55.9
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 6.7e-28 129.0 106 59.4
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 8.8e-28 128.6 138 48.6
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 8.8e-28 128.6 117 56.4
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 8.8e-28 128.6 134 53.0
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 8.8e-28 128.6 342 39.8
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 8.8e-28 128.6 115 54.8
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 8.8e-28 128.6 117 50.4
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.2e-27 128.3 132 51.5
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 1.5e-27 127.9 122 53.3
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 1.5e-27 127.9 111 55.0
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 1.5e-27 127.9 108 57.4
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 1.5e-27 127.9 113 55.8
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 2.0e-27 127.5 128 51.6
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 2.6e-27 127.1 111 55.0
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 5.7e-27 125.9 135 51.9
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 7.5e-27 125.6 127 50.4
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 9.7e-27 125.2 108 56.5
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 9.7e-27 125.2 125 50.4
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 9.7e-27 125.2 118 54.2
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 1.3e-26 124.8 146 47.9
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 1.3e-26 124.8 128 49.2
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 1.3e-26 124.8 127 52.8
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 2.2e-26 124.0 130 52.3
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 2.2e-26 124.0 127 52.8
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 2.8e-26 123.6 114 54.4
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 3.7e-26 123.2 121 52.1
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 3.7e-26 123.2 135 51.1
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 3.7e-26 123.2 107 54.2
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 4.8e-26 122.9 120 50.0
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 4.8e-26 122.9 116 50.0
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 6.3e-26 122.5 126 49.2
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 6.3e-26 122.5 124 50.0
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 8.2e-26 122.1 113 54.0
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 8.2e-26 122.1 116 55.2
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 1.1e-25 121.7 346 44.2
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 1.1e-25 121.7 108 57.4
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 1.4e-25 121.3 117 50.4
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 1.8e-25 120.9 116 50.9
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 1.8e-25 120.9 120 49.2
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 1.8e-25 120.9 121 52.1
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 2.4e-25 120.6 117 49.6
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 2.4e-25 120.6 121 51.2
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 2.4e-25 120.6 117 53.8
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 3.1e-25 120.2 125 48.0
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 5.3e-25 119.4 106 53.8
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 7.0e-25 119.0 119 47.9
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 9.1e-25 118.6 348 41.4
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 1.2e-24 118.2 108 50.0
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 1.2e-24 118.2 123 49.6
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 2.0e-24 117.5 133 51.9
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 2.7e-24 117.1 131 50.4
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 4.5e-24 116.3 126 51.6
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 7.7e-24 115.5 112 49.1
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 1.3e-23 114.8 352 39.2
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 1.3e-23 114.8 119 47.1
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 1.3e-23 114.8 108 50.9
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 3.8e-23 113.2 125 44.0
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 8.5e-23 112.1 103 50.5
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 8.5e-23 112.1 116 50.9
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 1.1e-22 111.7 121 44.6
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 1.9e-22 110.9 111 52.3
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 2.5e-22 110.5 126 46.0
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 2.5e-22 110.5 126 46.0
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 5.5e-22 109.4 115 53.0
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 5.5e-22 109.4 112 51.8
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 5.5e-22 109.4 112 51.8
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 5.5e-22 109.4 112 51.8
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 5.5e-22 109.4 112 51.8
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 9.4e-22 108.6 109 51.4
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 1.2e-21 108.2 110 48.2
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 3.6e-21 106.7 119 47.1
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 3.0e-20 103.6 111 50.5
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 6.8e-20 102.4 126 46.0
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 1.2e-19 101.7 94 54.3
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 1.3e-18 98.2 86 50.0
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 1.3e-18 98.2 131 43.5
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 1.7e-18 97.8 109 46.8
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 4.1e-17 93.2 109 45.0
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 5.5e-14 82.8 120 40.8
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 1.2e-13 81.6 106 42.5
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 2.1e-13 80.9 116 38.8
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 3.6e-13 80.1 109 43.1
Os06g0553200 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 8.0e-13 79.0 125 40.8
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 1.4e-12 78.2 120 41.7
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 2.3e-12 77.4 119 37.0
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 1.2e-11 75.1 129 38.0
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 8.3e-10 68.9 66 53.0
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 5.9e-08 62.8 119 30.3
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 1.9e-06 57.8 108 32.4
Cc01_g18330 Coffea canephora HOM05D007363 ORTHO05D009018 4.3e-06 56.6 111 34.2
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 9.5e-06 55.5 86 36.0


User provided reference genes

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