Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 4.2e-176 621.3 329 100.0
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 3.5e-162 575.1 329 93.6
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 6.2e-103 378.3 344 62.5
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 1.2e-101 374.0 351 60.7
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 1.7e-100 370.2 348 60.3
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 1.9e-99 366.7 354 57.9
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 3.2e-99 365.9 349 58.7
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 6.7e-97 358.2 341 60.7
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 1.5e-96 357.1 334 60.8
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 7.4e-96 354.8 351 57.8
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 1.4e-94 350.5 247 71.3
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 1.4e-94 350.5 352 56.0
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 5.3e-94 348.6 347 62.5
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 9.0e-94 347.8 357 58.5
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 4.5e-93 345.5 358 54.5
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 1.7e-92 343.6 373 56.8
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 1.7e-92 343.6 337 59.6
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 2.9e-92 342.8 353 59.8
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 3.8e-92 342.4 280 65.0
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 4.9e-92 342.0 354 56.2
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 6.4e-92 341.7 338 58.3
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.9e-91 340.1 351 60.4
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 3.2e-91 339.3 342 59.4
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 3.2e-91 339.3 353 59.5
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 3.2e-91 339.3 355 58.9
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 4.2e-91 339.0 351 57.0
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 2.1e-90 336.7 360 58.6
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 6.0e-90 335.1 352 56.0
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 6.0e-90 335.1 357 54.9
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 6.0e-90 335.1 357 54.9
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 2.3e-89 333.2 341 60.1
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 3.9e-89 332.4 350 57.4
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 3.9e-89 332.4 357 53.5
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 5.1e-89 332.0 340 57.6
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 6.7e-89 331.6 352 55.4
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 8.7e-89 331.3 352 54.0
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 8.7e-89 331.3 352 56.5
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 8.7e-89 331.3 352 56.5
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 8.7e-89 331.3 357 54.9
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 8.7e-89 331.3 348 58.9
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 1.1e-88 330.9 352 54.5
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 2.5e-88 329.7 351 57.8
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 3.3e-88 329.3 352 55.4
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 3.3e-88 329.3 331 59.5
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 4.3e-88 328.9 352 57.4
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 7.4e-88 328.2 249 71.5
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 9.6e-88 327.8 357 52.1
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 1.3e-87 327.4 356 53.7
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 1.6e-87 327.0 343 58.3
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 1.6e-87 327.0 247 68.0
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 1.6e-87 327.0 346 56.9
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 2.1e-87 326.6 355 56.3
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 2.1e-87 326.6 342 54.4
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 2.8e-87 326.2 353 53.3
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 4.8e-87 325.5 248 67.3
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 1.8e-86 323.6 355 54.6
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 5.3e-86 322.0 356 53.4
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 5.3e-86 322.0 350 54.6
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 6.9e-86 321.6 349 58.2
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.2e-85 320.9 356 52.5
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 1.5e-85 320.5 356 52.8
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.5e-85 320.5 356 52.8
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 2.0e-85 320.1 350 55.1
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 3.4e-85 319.3 349 58.2
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 3.4e-85 319.3 356 52.8
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 3.4e-85 319.3 195 76.9
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 4.5e-85 318.9 353 54.4
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 1.0e-84 317.8 359 53.2
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 1.3e-84 317.4 350 58.0
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 2.9e-84 316.2 193 77.2
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 3.8e-84 315.8 357 51.3
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 3.8e-84 315.8 195 77.4
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 3.8e-84 315.8 354 55.1
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 3.8e-84 315.8 195 77.4
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 2.5e-83 313.2 347 55.6
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 4.2e-83 312.4 329 57.1
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 4.2e-83 312.4 341 56.3
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 9.3e-83 311.2 352 53.1
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 1.6e-82 310.5 194 77.3
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 3.5e-82 309.3 353 54.1
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 7.9e-82 308.1 251 68.1
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 7.9e-82 308.1 339 57.5
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 1.3e-81 307.4 407 50.4
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 2.3e-81 306.6 352 56.2
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 1.1e-80 304.3 238 65.1
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 1.5e-80 303.9 199 72.9
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 5.7e-80 302.0 204 73.5
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 1.3e-79 300.8 245 64.5
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 2.2e-79 300.1 352 51.7
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 1.0e-76 291.2 361 53.2
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 1.0e-76 291.2 391 51.4
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 1.3e-76 290.8 336 56.2
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 2.2e-76 290.0 366 51.1
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 2.5e-75 286.6 430 46.5
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 1.2e-74 284.3 204 69.1
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 8.2e-71 271.6 253 61.3
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 1.2e-69 267.7 264 59.5
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 9.4e-67 258.1 330 50.3
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 2.4e-62 243.4 201 62.2
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 1.2e-61 241.1 282 56.0
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 1.2e-61 241.1 241 60.6
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 1.5e-61 240.7 275 57.1
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 2.0e-61 240.4 183 65.6
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 2.3e-57 226.9 278 46.4
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 3.7e-55 219.5 125 86.4
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 6.3e-55 218.8 274 52.6
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 5.9e-53 212.2 279 45.5
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 7.2e-51 205.3 173 57.8
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 3.3e-48 196.4 253 45.1
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 7.0e-46 188.7 193 48.7
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 1.3e-23 114.8 82 62.2
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 6.4e-23 112.5 137 44.5
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 1.3e-20 104.8 158 41.1
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 8.9e-17 92.0 204 31.9
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 5.8e-16 89.4 163 33.7
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 2.9e-15 87.0 60 76.7
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 1.1e-14 85.1 72 54.2
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 1.7e-12 77.8 52 76.9
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 8.1e-10 68.9 50 56.0
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 1.8e-09 67.8 36 91.7
Pp3c6_29630 Physcomitrium patens HOM05D006540 ORTHO05D008202 4.1e-06 56.6 70 42.9


User provided reference genes

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